RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 SETXQ7Z333 2677 aaKnown RBP12.32□□□□□ -0.44
VEGFA-205ENST00000372067 TENM4Q6N022 2769 aa12.32□□□□□ -0.44
VEGFA-205ENST00000372067 TSPEAR-AS2P59090 65 aa12.32□□□□□ -0.44
VEGFA-205ENST00000372067 LINC01620Q4KN68 170 aa12.32□□□□□ -0.44
VEGFA-205ENST00000372067 UBE2WQ96B02 151 aa12.31□□□□□ -0.44
VEGFA-205ENST00000372067 C11orf72Q8NBR9 251 aa12.31□□□□□ -0.44
VEGFA-205ENST00000372067 C2orf48Q96LS8 159 aa12.31□□□□□ -0.44
VEGFA-205ENST00000372067 SMCR5Q8TEV8 140 aa12.3□□□□□ -0.44
VEGFA-205ENST00000372067 ZNF625Q96I27 306 aaPredicted RBP12.3□□□□□ -0.44
VEGFA-205ENST00000372067 CUBNO60494 3623 aa12.3□□□□□ -0.44
VEGFA-205ENST00000372067 DPH3Q96FX2 82 aa12.29□□□□□ -0.44
VEGFA-205ENST00000372067 TMEM263Q8WUH6 116 aaKnown RBP12.29□□□□□ -0.44
VEGFA-205ENST00000372067 F8WDY8 70 aa12.29□□□□□ -0.44
VEGFA-205ENST00000372067 RS1O15537 224 aa12.29□□□□□ -0.44
VEGFA-205ENST00000372067 LINC01600Q96MT4 127 aa12.29□□□□□ -0.44
VEGFA-205ENST00000372067 FLNBO75369 2602 aaKnown RBP12.28□□□□□ -0.44
VEGFA-205ENST00000372067 A8MZ25 164 aa12.28□□□□□ -0.44
VEGFA-205ENST00000372067 IGHV3-33P01772 117 aa12.28□□□□□ -0.44
VEGFA-205ENST00000372067 hADV29S1A0JD25 119 aa12.28□□□□□ -0.44
VEGFA-205ENST00000372067 LEPROTO15243 131 aa12.28□□□□□ -0.44
VEGFA-205ENST00000372067 K7EQD1 137 aa12.27□□□□□ -0.44
VEGFA-205ENST00000372067 DSCR8Q96T75 97 aa12.27□□□□□ -0.44
VEGFA-205ENST00000372067 TRBV10-2A0A0K0K1G8 114 aa12.26□□□□□ -0.45
VEGFA-205ENST00000372067 GAGE2AQ6NT46 116 aa12.26□□□□□ -0.45
VEGFA-205ENST00000372067 NDUFA12Q9UI09 145 aa12.26□□□□□ -0.45
VEGFA-205ENST00000372067 TMEM223A0PJW6 202 aa12.26□□□□□ -0.45
VEGFA-205ENST00000372067 SLC25A29Q8N8R3 303 aa12.26□□□□□ -0.45
VEGFA-205ENST00000372067 GCN1Q92616 2671 aaKnown RBP12.26□□□□□ -0.45
VEGFA-205ENST00000372067 IGHV3-30-3P0DP02 117 aa12.25□□□□□ -0.45
VEGFA-205ENST00000372067 H7C423 109 aa12.25□□□□□ -0.45
VEGFA-205ENST00000372067 MRAPQ8TCY5 172 aa12.25□□□□□ -0.45
VEGFA-205ENST00000372067 LOC100131303A0A0U1RQF7 123 aa12.25□□□□□ -0.45
VEGFA-205ENST00000372067 IGLV1-51P01701 117 aa12.25□□□□□ -0.45
VEGFA-205ENST00000372067 C16orf95Q9H693 158 aa12.25□□□□□ -0.45
VEGFA-205ENST00000372067 CHCHD7Q9BUK0 85 aa12.24□□□□□ -0.45
VEGFA-205ENST00000372067 TOMM7Q9P0U1 55 aa12.24□□□□□ -0.45
VEGFA-205ENST00000372067 CRYGAP11844 174 aa12.24□□□□□ -0.45
VEGFA-205ENST00000372067 C16orf74Q96GX8 76 aa12.24□□□□□ -0.45
VEGFA-205ENST00000372067 COX7CP15954 63 aa12.24□□□□□ -0.45
VEGFA-205ENST00000372067 A0A096LPF7 62 aa12.23□□□□□ -0.45
VEGFA-205ENST00000372067 A8MTW9 85 aa12.23□□□□□ -0.45
VEGFA-205ENST00000372067 UBE2D4Q9Y2X8 147 aa12.23□□□□□ -0.45
VEGFA-205ENST00000372067 FAM240AA0A1B0GVK7 77 aa12.23□□□□□ -0.45
VEGFA-205ENST00000372067 DEFB4AO15263 64 aa12.23□□□□□ -0.45
VEGFA-205ENST00000372067 LINC00482Q8N8I6 264 aa12.23□□□□□ -0.45
VEGFA-205ENST00000372067 ATRQ13535 2644 aa12.22□□□□□ -0.45
VEGFA-205ENST00000372067 ATXN8Q156A1 80 aa12.22□□□□□ -0.45
VEGFA-205ENST00000372067 BEAN1Q3B7T3 259 aa12.22□□□□□ -0.45
VEGFA-205ENST00000372067 C2orf82Q6UX34 121 aa12.22□□□□□ -0.45
VEGFA-205ENST00000372067 MUSTN1Q8IVN3 82 aa12.22□□□□□ -0.45
VEGFA-205ENST00000372067 HTN3P15516 51 aa12.21□□□□□ -0.45
VEGFA-205ENST00000372067 CDKN2A-AS1Q9UH64 79 aa12.21□□□□□ -0.45
VEGFA-205ENST00000372067 TRIAP1O43715 76 aa12.21□□□□□ -0.45
VEGFA-205ENST00000372067 DAND5Q8N907 189 aa12.21□□□□□ -0.45
VEGFA-205ENST00000372067 TMEM243Q9BU79 118 aa12.21□□□□□ -0.45
VEGFA-205ENST00000372067 AMELXQ99217 191 aa12.21□□□□□ -0.46
VEGFA-205ENST00000372067 PYGO1Q9Y3Y4 419 aa12.21□□□□□ -0.46
VEGFA-205ENST00000372067 DEFB121Q5J5C9 76 aa12.19□□□□□ -0.46
VEGFA-205ENST00000372067 PIK3CD-AS1Q5SR53 167 aa12.19□□□□□ -0.46
VEGFA-205ENST00000372067 IMUPQ9GZP8 106 aa12.19□□□□□ -0.46
VEGFA-205ENST00000372067 IGHV1-58A0A0C4DH39 117 aa12.18□□□□□ -0.46
VEGFA-205ENST00000372067 A0A0J9YXY3 114 aa12.18□□□□□ -0.46
VEGFA-205ENST00000372067 DAZ2Q13117 558 aaKnown RBP12.17□□□□□ -0.46
VEGFA-205ENST00000372067 CIRBPQ14011 172 aaKnown RBP12.17□□□□□ -0.46
VEGFA-205ENST00000372067 LINC00336Q6ZUF6 198 aa12.17□□□□□ -0.46
VEGFA-205ENST00000372067 DAZ4Q86SG3 579 aaKnown RBP12.17□□□□□ -0.46
VEGFA-205ENST00000372067 DAZ3Q9NR90 486 aaKnown RBP12.17□□□□□ -0.46
VEGFA-205ENST00000372067 TRBV10-1A0A0K0K1A3 114 aa12.16□□□□□ -0.46
VEGFA-205ENST00000372067 DEFB135Q30KP9 77 aa12.16□□□□□ -0.46
VEGFA-205ENST00000372067 MRPS36P82909 103 aaKnown RBP12.16□□□□□ -0.46
VEGFA-205ENST00000372067 NBEAL2Q6ZNJ1 2754 aa12.16□□□□□ -0.46
VEGFA-205ENST00000372067 NBPF19A0A087WUL8 3843 aa12.16□□□□□ -0.46
VEGFA-205ENST00000372067 TINCRA0A1B0GVN0 87 aa12.16□□□□□ -0.46
VEGFA-205ENST00000372067 NIPBLQ6KC79 2804 aaeCLIP12.15□□□□□ -0.461e-6■■□□□ 11.7
VEGFA-205ENST00000372067 F8P00451 2351 aa12.15□□□□□ -0.46
VEGFA-205ENST00000372067 PRIMA1Q86XR5 153 aa12.15□□□□□ -0.46
VEGFA-205ENST00000372067 VSIG2Q96IQ7 327 aa12.15□□□□□ -0.46
VEGFA-205ENST00000372067 KRTAP10-3P60369 221 aa12.15□□□□□ -0.46
VEGFA-205ENST00000372067 Q9H8V8 135 aa12.15□□□□□ -0.46
VEGFA-205ENST00000372067 CLEC2BQ92478 149 aa12.15□□□□□ -0.47
VEGFA-205ENST00000372067 C11orf68Q9H3H3 251 aaKnown RBP12.15□□□□□ -0.47
VEGFA-205ENST00000372067 CLPSL2Q6UWE3 100 aa12.14□□□□□ -0.47
VEGFA-205ENST00000372067 GIG44P09565 113 aaPredicted RBP12.14□□□□□ -0.47
VEGFA-205ENST00000372067 COX6A2Q02221 97 aa12.13□□□□□ -0.47
VEGFA-205ENST00000372067 PKIGQ9Y2B9 76 aa12.13□□□□□ -0.47
VEGFA-205ENST00000372067 TRACP01848 142 aa12.13□□□□□ -0.47
VEGFA-205ENST00000372067 GYPEP15421 78 aa12.13□□□□□ -0.47
VEGFA-205ENST00000372067 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.12□□□□□ -0.47
VEGFA-205ENST00000372067 A0A0B4J2C4 111 aa12.12□□□□□ -0.47
VEGFA-205ENST00000372067 C5orf38Q86SI9 138 aa12.12□□□□□ -0.47
VEGFA-205ENST00000372067 ZNF469Q96JG9 3925 aaPredicted RBP12.12□□□□□ -0.47
VEGFA-205ENST00000372067 MALP21145 153 aa12.12□□□□□ -0.47
VEGFA-205ENST00000372067 C9orf66Q5T8R8 295 aa12.12□□□□□ -0.47
VEGFA-205ENST00000372067 NTM-AS1Q6ZSK4 140 aa12.12□□□□□ -0.47
VEGFA-205ENST00000372067 UPK3BQ9BT76 320 aa12.12□□□□□ -0.47
VEGFA-205ENST00000372067 HIST1H4AP62805 103 aaKnown RBP12.12□□□□□ -0.47
VEGFA-205ENST00000372067 C1orf43Q9BWL3 253 aa12.12□□□□□ -0.47
VEGFA-205ENST00000372067 PDZD2O15018 2839 aa12.11□□□□□ -0.47
VEGFA-205ENST00000372067 TRBV30A0A0K0K1B3 111 aa12.11□□□□□ -0.47
VEGFA-205ENST00000372067 PRO0628Q9UI54 55 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms