RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 ENHOQ6UWT2 76 aa14.25□□□□□ -0.13
LMO4-202ENST00000370544 PIEZO1Q92508 2521 aa14.25□□□□□ -0.13
LMO4-202ENST00000370544 COX17Q14061 63 aa14.25□□□□□ -0.13
LMO4-202ENST00000370544 BRI3O95415 125 aa14.24□□□□□ -0.13
LMO4-202ENST00000370544 C7orf33Q8WU49 177 aa14.24□□□□□ -0.13
LMO4-202ENST00000370544 Q8IZM0 81 aa14.24□□□□□ -0.13
LMO4-202ENST00000370544 CCKP06307 115 aa14.24□□□□□ -0.13
LMO4-202ENST00000370544 C1orf158Q8N1D5 194 aa14.24□□□□□ -0.13
LMO4-202ENST00000370544 ARHGAP32A7KAX9 2087 aa14.23□□□□□ -0.13
LMO4-202ENST00000370544 LOC107984640A0A0U1RRK4 108 aa14.23□□□□□ -0.13
LMO4-202ENST00000370544 Q6ZQY7 126 aa14.23□□□□□ -0.13
LMO4-202ENST00000370544 DHRS4-AS1Q9P1J3 65 aa14.23□□□□□ -0.13
LMO4-202ENST00000370544 NDUFV3P56181 108 aaKnown RBP14.23□□□□□ -0.13
LMO4-202ENST00000370544 SMIM11BQ8TCY0 68 aa14.23□□□□□ -0.13
LMO4-202ENST00000370544 CCDC168Q8NDH2 2452 aa14.22□□□□□ -0.13
LMO4-202ENST00000370544 CPAMD8Q8IZJ3 1885 aa14.22□□□□□ -0.13
LMO4-202ENST00000370544 POM121L12Q8N7R1 296 aa14.22□□□□□ -0.13
LMO4-202ENST00000370544 SORL1Q92673 2214 aa14.22□□□□□ -0.13
LMO4-202ENST00000370544 ZNF580Q9UK33 172 aa14.22□□□□□ -0.13
LMO4-202ENST00000370544 PIEZO2Q9H5I5 2752 aa14.22□□□□□ -0.13
LMO4-202ENST00000370544 LST1O00453 97 aa14.22□□□□□ -0.13
LMO4-202ENST00000370544 URB1-AS1Q96HZ7 61 aa14.21□□□□□ -0.13
LMO4-202ENST00000370544 C16orf95Q9H693 158 aa14.21□□□□□ -0.13
LMO4-202ENST00000370544 LINC00310P59036 64 aa14.21□□□□□ -0.13
LMO4-202ENST00000370544 LINC00242Q5T6M2 205 aa14.2□□□□□ -0.14
LMO4-202ENST00000370544 PRRC2AP48634 2157 aaKnown RBP14.2□□□□□ -0.14
LMO4-202ENST00000370544 SRCAPQ6ZRS2 3230 aa14.19□□□□□ -0.14
LMO4-202ENST00000370544 C3orf84H3BNL1 204 aa14.19□□□□□ -0.14
LMO4-202ENST00000370544 PPDPFQ9H3Y8 114 aa14.19□□□□□ -0.14
LMO4-202ENST00000370544 RAI1Q7Z5J4 1906 aaPredicted RBP14.19□□□□□ -0.14
LMO4-202ENST00000370544 RPL37AP8A6NKH3 93 aa14.18□□□□□ -0.14
LMO4-202ENST00000370544 CYSRT1A8MQ03 144 aa14.18□□□□□ -0.14
LMO4-202ENST00000370544 C20orf197Q8N268 126 aa14.18□□□□□ -0.14
LMO4-202ENST00000370544 CHCHD7Q9BUK0 85 aa14.18□□□□□ -0.14
LMO4-202ENST00000370544 RETNQ9HD89 108 aa14.18□□□□□ -0.14
LMO4-202ENST00000370544 MUC7Q8TAX7 377 aa14.17□□□□□ -0.14
LMO4-202ENST00000370544 ZNF73O43830 326 aaPredicted RBP14.17□□□□□ -0.14
LMO4-202ENST00000370544 COX8CQ7Z4L0 72 aa14.17□□□□□ -0.14
LMO4-202ENST00000370544 ZNF706Q9Y5V0 76 aaPredicted RBP14.16□□□□□ -0.14
LMO4-202ENST00000370544 LY6G6CO95867 125 aa14.16□□□□□ -0.14
LMO4-202ENST00000370544 WFDC10BQ8IUB3 73 aa14.15□□□□□ -0.14
LMO4-202ENST00000370544 UQCRQO14949 82 aa14.15□□□□□ -0.14
LMO4-202ENST00000370544 NDUFC2O95298 119 aa14.14□□□□□ -0.15
LMO4-202ENST00000370544 SMIM1B2RUZ4 78 aa14.14□□□□□ -0.15
LMO4-202ENST00000370544 FHL2Q14192 279 aa14.13□□□□□ -0.15
LMO4-202ENST00000370544 SEC61GP60059 68 aa14.13□□□□□ -0.15
LMO4-202ENST00000370544 USP17L23D6RBM5 183 aa14.12□□□□□ -0.15
LMO4-202ENST00000370544 UNQ6190/PRO20217Q6UXQ8 127 aa14.12□□□□□ -0.15
LMO4-202ENST00000370544 COX6A2Q02221 97 aa14.11□□□□□ -0.15
LMO4-202ENST00000370544 LINC00694P0DN24 101 aa14.11□□□□□ -0.15
LMO4-202ENST00000370544 LINC00474Q9P2X8 69 aa14.11□□□□□ -0.15
LMO4-202ENST00000370544 IGLV4-60A0A075B6I1 120 aa14.1□□□□□ -0.15
LMO4-202ENST00000370544 PLAC8L1A1L4L8 177 aa14.1□□□□□ -0.15
LMO4-202ENST00000370544 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.1□□□□□ -0.15
LMO4-202ENST00000370544 CASC2Q6XLA1 102 aa14.1□□□□□ -0.15
LMO4-202ENST00000370544 ADAMTS20P59510 1910 aa14.09□□□□□ -0.15
LMO4-202ENST00000370544 EGFEM1PQ0D2K5 195 aa14.08□□□□□ -0.16
LMO4-202ENST00000370544 C3orf22Q8N5N4 141 aa14.08□□□□□ -0.16
LMO4-202ENST00000370544 ABCA2Q9BZC7 2435 aa14.08□□□□□ -0.16
LMO4-202ENST00000370544 BEAN1Q3B7T3 259 aa14.08□□□□□ -0.16
LMO4-202ENST00000370544 HRCT1Q6UXD1 115 aa14.07□□□□□ -0.16
LMO4-202ENST00000370544 Q6ZTC4 211 aa14.07□□□□□ -0.16
LMO4-202ENST00000370544 NUPR2A6NF83 97 aa14.07□□□□□ -0.16
LMO4-202ENST00000370544 C9orf116Q5BN46 136 aaPredicted RBP14.07□□□□□ -0.16
LMO4-202ENST00000370544 MYO18BQ8IUG5 2567 aa14.07□□□□□ -0.16
LMO4-202ENST00000370544 FAM236DA0A1B0GTK5 79 aa14.07□□□□□ -0.16
LMO4-202ENST00000370544 FAM236CP0DP71 79 aa14.07□□□□□ -0.16
LMO4-202ENST00000370544 TSPEAR-AS2P59090 65 aa14.06□□□□□ -0.16
LMO4-202ENST00000370544 SPINK6Q6UWN8 80 aa14.06□□□□□ -0.16
LMO4-202ENST00000370544 AMELXQ99217 191 aa14.06□□□□□ -0.16
LMO4-202ENST00000370544 CSDC2Q9Y534 153 aaKnown RBP14.05□□□□□ -0.16
LMO4-202ENST00000370544 Q6ZSN1 163 aa14.05□□□□□ -0.16
LMO4-202ENST00000370544 TLN1Q9Y490 2541 aaKnown RBP14.05□□□□□ -0.16
LMO4-202ENST00000370544 IGLV9-49A0A0B4J1Y8 123 aa14.04□□□□□ -0.16
LMO4-202ENST00000370544 EML5Q05BV3 1969 aa14.03□□□□□ -0.16
LMO4-202ENST00000370544 WFDC13Q8IUB5 93 aa14.03□□□□□ -0.16
LMO4-202ENST00000370544 M0QXV9 152 aa14.03□□□□□ -0.16
LMO4-202ENST00000370544 IMUPQ9GZP8 106 aa14.02□□□□□ -0.16
LMO4-202ENST00000370544 EXPH5Q8NEV8 1989 aa14.01□□□□□ -0.17
LMO4-202ENST00000370544 A0A096LNJ9 63 aa14.01□□□□□ -0.17
LMO4-202ENST00000370544 TRBV10-3A0A0K0K1G6 114 aa14.01□□□□□ -0.17
LMO4-202ENST00000370544 C6orf223Q8N319 242 aa13.99□□□□□ -0.17
LMO4-202ENST00000370544 C2CD3Q4AC94 2353 aa13.99□□□□□ -0.17
LMO4-202ENST00000370544 RPL28P46779 137 aaKnown RBP13.99□□□□□ -0.17
LMO4-202ENST00000370544 ADAMTSL4-AS1Q5T5F5 129 aa13.98□□□□□ -0.17
LMO4-202ENST00000370544 SERP2Q8N6R1 65 aa13.98□□□□□ -0.17
LMO4-202ENST00000370544 Q8N814 137 aa13.98□□□□□ -0.17
LMO4-202ENST00000370544 FAM19A3Q7Z5A8 133 aa13.98□□□□□ -0.17
LMO4-202ENST00000370544 NTM-AS1Q6ZSK4 140 aa13.97□□□□□ -0.17
LMO4-202ENST00000370544 PRR3P79522 188 aaKnown RBP13.97□□□□□ -0.17
LMO4-202ENST00000370544 MPLKIPQ8TAP9 179 aa13.97□□□□□ -0.17
LMO4-202ENST00000370544 BRK1Q8WUW1 75 aa13.96□□□□□ -0.17
LMO4-202ENST00000370544 A0A1B0GUV1 79 aa13.96□□□□□ -0.18
LMO4-202ENST00000370544 C10orf25Q5T742 122 aa13.96□□□□□ -0.18
LMO4-202ENST00000370544 REG3GQ6UW15 175 aa13.96□□□□□ -0.18
LMO4-202ENST00000370544 XGP55808 180 aa13.95□□□□□ -0.18
LMO4-202ENST00000370544 Q6JHZ5 121 aa13.95□□□□□ -0.18
LMO4-202ENST00000370544 Q8N2B8 174 aa13.94□□□□□ -0.18
LMO4-202ENST00000370544 LYPD5Q6UWN5 251 aa13.94□□□□□ -0.18
LMO4-202ENST00000370544 A0A087WYN8 130 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms