RNA–Protein interactions for RNA: ENST00000370206.8

CNN3-201, Transcript of calponin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-201ENST00000370206 SLC25A20O43772 301 aa15.56■□□□□ 0.08
CNN3-201ENST00000370206 PF4P02776 101 aa15.56■□□□□ 0.08
CNN3-201ENST00000370206 LINC00482Q8N8I6 264 aa15.56■□□□□ 0.08
CNN3-201ENST00000370206 ICOSQ9Y6W8 199 aa15.56■□□□□ 0.08
CNN3-201ENST00000370206 UNC79Q9P2D8 2635 aa15.56■□□□□ 0.08
CNN3-201ENST00000370206 ANKRD29Q8N6D5 301 aa15.55■□□□□ 0.08
CNN3-201ENST00000370206 ZNF625Q96I27 306 aaPredicted RBP15.54■□□□□ 0.08
CNN3-201ENST00000370206 NIPBLQ6KC79 2804 aaeCLIP15.53■□□□□ 0.08
CNN3-201ENST00000370206 HELZ2Q9BYK8 2649 aaKnown RBP15.53■□□□□ 0.08
CNN3-201ENST00000370206 LINC01620Q4KN68 170 aa15.53■□□□□ 0.08
CNN3-201ENST00000370206 LINC00308Q8TCZ7 52 aa15.53■□□□□ 0.08
CNN3-201ENST00000370206 KMT2BQ9UMN6 2715 aaPredicted RBP15.53■□□□□ 0.08
CNN3-201ENST00000370206 HIVEP2P31629 2446 aa15.52■□□□□ 0.08
CNN3-201ENST00000370206 TRBV6-8A0A0A6YYG3 113 aa15.51■□□□□ 0.07
CNN3-201ENST00000370206 LY6G6DO95868 133 aa15.51■□□□□ 0.07
CNN3-201ENST00000370206 PRIMA1Q86XR5 153 aa15.51■□□□□ 0.07
CNN3-201ENST00000370206 C2CD3Q4AC94 2353 aa15.51■□□□□ 0.07
CNN3-201ENST00000370206 RPL13AP40429 203 aaKnown RBP15.51■□□□□ 0.07
CNN3-201ENST00000370206 GAGE6Q13070 117 aa15.51■□□□□ 0.07
CNN3-201ENST00000370206 KIR2DL5BQ8NHK3 375 aa15.51■□□□□ 0.07
CNN3-201ENST00000370206 CRLF1O75462 422 aa15.5■□□□□ 0.07
CNN3-201ENST00000370206 HERV-K104P63124 156 aa15.5■□□□□ 0.07
CNN3-201ENST00000370206 LINC00612Q8N6U2 182 aa15.5■□□□□ 0.07
CNN3-201ENST00000370206 LINC01600Q96MT4 127 aa15.5■□□□□ 0.07
CNN3-201ENST00000370206 COX6CP09669 75 aa15.49■□□□□ 0.07
CNN3-201ENST00000370206 SCGB1A1P11684 91 aa15.48■□□□□ 0.07
CNN3-201ENST00000370206 COPS9Q8WXC6 57 aa15.48■□□□□ 0.07
CNN3-201ENST00000370206 CDIP1Q9H305 208 aa15.48■□□□□ 0.07
CNN3-201ENST00000370206 MEIG1Q5JSS6 88 aa15.47■□□□□ 0.07
CNN3-201ENST00000370206 FASNP49327 2511 aaKnown RBP15.47■□□□□ 0.07
CNN3-201ENST00000370206 TRBV10-2A0A0K0K1G8 114 aa15.46■□□□□ 0.07
CNN3-201ENST00000370206 A0A0U1RRA0 63 aa15.46■□□□□ 0.07
CNN3-201ENST00000370206 DEFB130BP0DP73 79 aa15.46■□□□□ 0.07
CNN3-201ENST00000370206 DEFB130AP0DP74 79 aa15.46■□□□□ 0.07
CNN3-201ENST00000370206 IGLV4-60A0A075B6I1 120 aa15.46■□□□□ 0.07
CNN3-201ENST00000370206 SOSTDC1Q6X4U4 206 aa15.46■□□□□ 0.07
CNN3-201ENST00000370206 CHCHD5Q9BSY4 110 aa15.46■□□□□ 0.07
CNN3-201ENST00000370206 X6R8D5 127 aa15.45■□□□□ 0.06
CNN3-201ENST00000370206 PPDPFQ9H3Y8 114 aa15.43■□□□□ 0.06
CNN3-201ENST00000370206 SMIM9A6NGZ8 99 aa15.42■□□□□ 0.06
CNN3-201ENST00000370206 COX7B2Q8TF08 81 aa15.42■□□□□ 0.06
CNN3-201ENST00000370206 CLEC2BQ92478 149 aa15.42■□□□□ 0.06
CNN3-201ENST00000370206 LST1O00453 97 aa15.42■□□□□ 0.06
CNN3-201ENST00000370206 IGKV3OR2-268A0A0C4DH90 116 aa15.41■□□□□ 0.06
CNN3-201ENST00000370206 C9orf66Q5T8R8 295 aa15.41■□□□□ 0.06
CNN3-201ENST00000370206 NTN5Q8WTR8 489 aaPredicted RBP15.41■□□□□ 0.06
CNN3-201ENST00000370206 IGHV3OR16-9A0A0B4J2B5 98 aa15.4■□□□□ 0.06
CNN3-201ENST00000370206 SPATA3Q8NHX4 192 aa15.4■□□□□ 0.06
CNN3-201ENST00000370206 GYPEP15421 78 aa15.39■□□□□ 0.05
CNN3-201ENST00000370206 H3BT86 120 aa15.38■□□□□ 0.05
CNN3-201ENST00000370206 C2orf82Q6UX34 121 aa15.38■□□□□ 0.05
CNN3-201ENST00000370206 INAFM1C9JVW0 142 aa15.37■□□□□ 0.05
CNN3-201ENST00000370206 A0A087WZ39 114 aa15.36■□□□□ 0.05
CNN3-201ENST00000370206 TMEM262E9PQX1 116 aa15.36■□□□□ 0.05
CNN3-201ENST00000370206 SHISA2Q6UWI4 295 aa15.36■□□□□ 0.05
CNN3-201ENST00000370206 TOMM7Q9P0U1 55 aa15.36■□□□□ 0.05
CNN3-201ENST00000370206 PRO0255Q9UI72 69 aa15.36■□□□□ 0.05
CNN3-201ENST00000370206 LINC00959A0A1B0GUT2 108 aa15.34■□□□□ 0.05
CNN3-201ENST00000370206 XGP55808 180 aa15.34■□□□□ 0.05
CNN3-201ENST00000370206 UBE2WQ96B02 151 aa15.34■□□□□ 0.05
CNN3-201ENST00000370206 LYRM9A8MSI8 78 aa15.34■□□□□ 0.05
CNN3-201ENST00000370206 FAM222AQ5U5X8 452 aa15.34■□□□□ 0.05
CNN3-201ENST00000370206 TEX49A0A1B0GTD5 131 aa15.33■□□□□ 0.04
CNN3-201ENST00000370206 COX7A2LO14548 114 aa15.33■□□□□ 0.04
CNN3-201ENST00000370206 A0A1B0GUV1 79 aa15.32■□□□□ 0.04
CNN3-201ENST00000370206 MT-ATP8P03928 68 aa15.32■□□□□ 0.04
CNN3-201ENST00000370206 MIR7-3HGQ8N6C7 128 aa15.32■□□□□ 0.04
CNN3-201ENST00000370206 FN1P02751 2386 aaKnown RBP15.32■□□□□ 0.04
CNN3-201ENST00000370206 C5orf38Q86SI9 138 aa15.31■□□□□ 0.04
CNN3-201ENST00000370206 DEFB135Q30KP9 77 aa15.29■□□□□ 0.04
CNN3-201ENST00000370206 PAX4O43316 350 aa15.29■□□□□ 0.04
CNN3-201ENST00000370206 APOC4P55056 127 aa15.28■□□□□ 0.04
CNN3-201ENST00000370206 IBA57-AS1B1ANH7 110 aa15.28■□□□□ 0.04
CNN3-201ENST00000370206 TRAV13-2A0A0B4J235 113 aa15.27■□□□□ 0.04
CNN3-201ENST00000370206 LINC00158P58513 81 aa15.27■□□□□ 0.04
CNN3-201ENST00000370206 SS18Q15532 418 aa15.27■□□□□ 0.04
CNN3-201ENST00000370206 HECTD1Q9ULT8 2610 aa15.26■□□□□ 0.03
CNN3-201ENST00000370206 A0A096LPF7 62 aa15.26■□□□□ 0.03
CNN3-201ENST00000370206 SND1-IT1Q9HBX3 110 aa15.26■□□□□ 0.03
CNN3-201ENST00000370206 CRPP02741 224 aa15.25■□□□□ 0.03
CNN3-201ENST00000370206 CITED1Q99966 193 aa15.25■□□□□ 0.03
CNN3-201ENST00000370206 TRAV8-4A0A0B4J246 113 aa15.25■□□□□ 0.03
CNN3-201ENST00000370206 IGHV4-28A0A0C4DH34 117 aa15.25■□□□□ 0.03
CNN3-201ENST00000370206 DEFB4AO15263 64 aa15.25■□□□□ 0.03
CNN3-201ENST00000370206 XCL1P47992 114 aa15.25■□□□□ 0.03
CNN3-201ENST00000370206 IGKV2-28A0A075B6P5 120 aa15.24■□□□□ 0.03
CNN3-201ENST00000370206 IGKV2D-28P01615 120 aa15.24■□□□□ 0.03
CNN3-201ENST00000370206 LINC00337Q8N6G1 96 aa15.24■□□□□ 0.03
CNN3-201ENST00000370206 GCN1Q92616 2671 aaKnown RBP15.23■□□□□ 0.03
CNN3-201ENST00000370206 DEFB121Q5J5C9 76 aa15.23■□□□□ 0.03
CNN3-201ENST00000370206 TRACP01848 142 aa15.22■□□□□ 0.03
CNN3-201ENST00000370206 RPL28P46779 137 aaKnown RBP15.22■□□□□ 0.03
CNN3-201ENST00000370206 CCL18P55774 89 aa15.22■□□□□ 0.03
CNN3-201ENST00000370206 LINC01561Q8N1V8 128 aa15.22■□□□□ 0.03
CNN3-201ENST00000370206 OTOGQ6ZRI0 2925 aa15.22■□□□□ 0.03
CNN3-201ENST00000370206 DAD1P61803 113 aa15.21■□□□□ 0.03
CNN3-201ENST00000370206 C6orf226Q5I0X4 101 aa15.21■□□□□ 0.03
CNN3-201ENST00000370206 CLPSL2Q6UWE3 100 aa15.21■□□□□ 0.03
CNN3-201ENST00000370206 NOTCH2Q04721 2471 aa15.21■□□□□ 0.03
CNN3-201ENST00000370206 PFN2P35080 140 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms