RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 LINC00467Q9BRT7 94 aa13.73□□□□□ -0.21
CMTM3-201ENST00000361909 C16orf95Q9H693 158 aa13.72□□□□□ -0.21
CMTM3-201ENST00000361909 EDN2P20800 178 aa13.72□□□□□ -0.21
CMTM3-201ENST00000361909 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.71□□□□□ -0.21
CMTM3-201ENST00000361909 IGKV2-29A2NJV5 120 aaPredicted RBP13.71□□□□□ -0.21
CMTM3-201ENST00000361909 NOTCH2Q04721 2471 aa13.71□□□□□ -0.21
CMTM3-201ENST00000361909 OTOGQ6ZRI0 2925 aa13.7□□□□□ -0.22
CMTM3-201ENST00000361909 GAGE2AQ6NT46 116 aa13.7□□□□□ -0.22
CMTM3-201ENST00000361909 C2orf48Q96LS8 159 aa13.7□□□□□ -0.22
CMTM3-201ENST00000361909 HIVEP2P31629 2446 aa13.7□□□□□ -0.22
CMTM3-201ENST00000361909 IGHV3-53P01767 116 aa13.69□□□□□ -0.22
CMTM3-201ENST00000361909 TRAV13-2A0A0B4J235 113 aa13.69□□□□□ -0.22
CMTM3-201ENST00000361909 A8MTW9 85 aa13.69□□□□□ -0.22
CMTM3-201ENST00000361909 DGAT2L7PQ6IED9 249 aa13.69□□□□□ -0.22
CMTM3-201ENST00000361909 IGHV3-73A0A0B4J1V6 119 aa13.68□□□□□ -0.22
CMTM3-201ENST00000361909 RPL28P46779 137 aaKnown RBP13.68□□□□□ -0.22
CMTM3-201ENST00000361909 HIST2H2BDQ6DRA6 164 aa13.68□□□□□ -0.22
CMTM3-201ENST00000361909 C22orf24Q9Y442 160 aa13.68□□□□□ -0.22
CMTM3-201ENST00000361909 MALP21145 153 aa13.68□□□□□ -0.22
CMTM3-201ENST00000361909 PROK1P58294 105 aa13.68□□□□□ -0.22
CMTM3-201ENST00000361909 C4orf3Q8WVX3 66 aa13.68□□□□□ -0.22
CMTM3-201ENST00000361909 ZNF625Q96I27 306 aaPredicted RBP13.68□□□□□ -0.22
CMTM3-201ENST00000361909 SOSTDC1Q6X4U4 206 aa13.67□□□□□ -0.22
CMTM3-201ENST00000361909 ANK3Q12955 4377 aaKnown RBP13.66□□□□□ -0.22
CMTM3-201ENST00000361909 SMIM1B2RUZ4 78 aa13.66□□□□□ -0.22
CMTM3-201ENST00000361909 RPL18AQ02543 176 aaKnown RBP13.66□□□□□ -0.22
CMTM3-201ENST00000361909 Q6JHZ5 121 aa13.66□□□□□ -0.22
CMTM3-201ENST00000361909 OR13C6PQ8NH95 151 aa13.66□□□□□ -0.22
CMTM3-201ENST00000361909 DNAL4O96015 105 aa13.65□□□□□ -0.22
CMTM3-201ENST00000361909 RBMY1A1P0DJD3 496 aaKnown RBP13.65□□□□□ -0.22
CMTM3-201ENST00000361909 RBMY1CP0DJD4 496 aa13.65□□□□□ -0.22
CMTM3-201ENST00000361909 TMEM258P61165 79 aa13.65□□□□□ -0.22
CMTM3-201ENST00000361909 RBMY1FQ15415 496 aaKnown RBP13.65□□□□□ -0.22
CMTM3-201ENST00000361909 LINC00242Q5T6M2 205 aa13.65□□□□□ -0.22
CMTM3-201ENST00000361909 PRIMA1Q86XR5 153 aa13.65□□□□□ -0.22
CMTM3-201ENST00000361909 IGHV3OR16-12A0A075B7B8 117 aa13.65□□□□□ -0.22
CMTM3-201ENST00000361909 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.65□□□□□ -0.22
CMTM3-201ENST00000361909 LINC01006Q8NI28 216 aa13.65□□□□□ -0.22
CMTM3-201ENST00000361909 NACAE9PAV3 2078 aa13.64□□□□□ -0.23
CMTM3-201ENST00000361909 HOXD3P31249 432 aaPredicted RBP13.64□□□□□ -0.23
CMTM3-201ENST00000361909 SMIM9A6NGZ8 99 aa13.64□□□□□ -0.23
CMTM3-201ENST00000361909 INAFM1C9JVW0 142 aa13.63□□□□□ -0.23
CMTM3-201ENST00000361909 CRPP02741 224 aa13.63□□□□□ -0.23
CMTM3-201ENST00000361909 COX6A2Q02221 97 aa13.63□□□□□ -0.23
CMTM3-201ENST00000361909 FAM218AQ96MZ4 157 aa13.63□□□□□ -0.23
CMTM3-201ENST00000361909 SYNJ2BPP57105 145 aa13.62□□□□□ -0.23
CMTM3-201ENST00000361909 Q6ZSN1 163 aa13.62□□□□□ -0.23
CMTM3-201ENST00000361909 FAM19A5Q7Z5A7 132 aaPredicted RBP13.62□□□□□ -0.23
CMTM3-201ENST00000361909 MTORP42345 2549 aa13.61□□□□□ -0.23
CMTM3-201ENST00000361909 RS1O15537 224 aa13.61□□□□□ -0.23
CMTM3-201ENST00000361909 C18orf65Q6ZTR6 163 aa13.61□□□□□ -0.23
CMTM3-201ENST00000361909 KNCNA6PVL3 124 aa13.6□□□□□ -0.23
CMTM3-201ENST00000361909 SERP2Q8N6R1 65 aa13.6□□□□□ -0.23
CMTM3-201ENST00000361909 OBSCN-AS1Q96MR7 158 aa13.6□□□□□ -0.23
CMTM3-201ENST00000361909 LOC107984640A0A0U1RRK4 108 aa13.59□□□□□ -0.23
CMTM3-201ENST00000361909 H0YGX0 51 aa13.59□□□□□ -0.23
CMTM3-201ENST00000361909 KHDC1LQ5JSQ8 128 aa13.59□□□□□ -0.23
CMTM3-201ENST00000361909 KLK5Q9Y337 293 aaPredicted RBP13.58□□□□□ -0.24
CMTM3-201ENST00000361909 IGHV3-38A0A0C4DH36 116 aa13.58□□□□□ -0.24
CMTM3-201ENST00000361909 F5H768 121 aa13.58□□□□□ -0.24
CMTM3-201ENST00000361909 DEFB136Q30KP8 78 aa13.58□□□□□ -0.24
CMTM3-201ENST00000361909 Q9UF83 564 aa13.58□□□□□ -0.24
CMTM3-201ENST00000361909 A0A0U1RRA0 63 aa13.56□□□□□ -0.24
CMTM3-201ENST00000361909 HTN1P15515 57 aa13.56□□□□□ -0.24
CMTM3-201ENST00000361909 SLURP1P55000 103 aa13.56□□□□□ -0.24
CMTM3-201ENST00000361909 C11orf72Q8NBR9 251 aa13.56□□□□□ -0.24
CMTM3-201ENST00000361909 CUBNO60494 3623 aa13.56□□□□□ -0.24
CMTM3-201ENST00000361909 hADV29S1A0JD25 119 aa13.56□□□□□ -0.24
CMTM3-201ENST00000361909 WIPF1O43516 503 aa13.56□□□□□ -0.24
CMTM3-201ENST00000361909 NF1P21359 2839 aa13.54□□□□□ -0.24
CMTM3-201ENST00000361909 TRBV10-1A0A0K0K1A3 114 aa13.54□□□□□ -0.24
CMTM3-201ENST00000361909 HIVEP1P15822 2718 aa13.54□□□□□ -0.24
CMTM3-201ENST00000361909 Q9HAA7 133 aa13.54□□□□□ -0.24
CMTM3-201ENST00000361909 UPK3BQ9BT76 320 aa13.53□□□□□ -0.24
CMTM3-201ENST00000361909 DEFB131AP59861 70 aa13.52□□□□□ -0.25
CMTM3-201ENST00000361909 S100A7L2Q5SY68 101 aa13.52□□□□□ -0.25
CMTM3-201ENST00000361909 CCL24O00175 119 aa13.51□□□□□ -0.25
CMTM3-201ENST00000361909 INSP01308 110 aa13.51□□□□□ -0.25
CMTM3-201ENST00000361909 SND1-IT1Q9HBX3 110 aa13.51□□□□□ -0.25
CMTM3-201ENST00000361909 NSD1Q96L73 2696 aaPredicted RBP13.51□□□□□ -0.25
CMTM3-201ENST00000361909 TRAV13-1A0A0B4J241 112 aa13.51□□□□□ -0.25
CMTM3-201ENST00000361909 RBMY1BA6NDE4 496 aaKnown RBP13.51□□□□□ -0.25
CMTM3-201ENST00000361909 RBMY1EA6NEQ0 496 aaKnown RBP13.51□□□□□ -0.25
CMTM3-201ENST00000361909 RBMY1DP0C7P1 496 aaKnown RBP13.51□□□□□ -0.25
CMTM3-201ENST00000361909 RPL36AP83881 106 aaKnown RBP13.51□□□□□ -0.25
CMTM3-201ENST00000361909 ATP5EP2Q5VTU8 51 aa13.51□□□□□ -0.25
CMTM3-201ENST00000361909 LINC00337Q8N6G1 96 aa13.51□□□□□ -0.25
CMTM3-201ENST00000361909 C11orf44Q8N8P7 122 aa13.51□□□□□ -0.25
CMTM3-201ENST00000361909 RPL36ALQ969Q0 106 aaKnown RBP13.51□□□□□ -0.25
CMTM3-201ENST00000361909 DPH3Q96FX2 82 aa13.51□□□□□ -0.25
CMTM3-201ENST00000361909 CDC42SE2Q9NRR3 84 aa13.51□□□□□ -0.25
CMTM3-201ENST00000361909 C14orf132Q9NPU4 83 aa13.49□□□□□ -0.25
CMTM3-201ENST00000361909 IGKV2-28A0A075B6P5 120 aa13.49□□□□□ -0.25
CMTM3-201ENST00000361909 IGKV2D-28P01615 120 aa13.49□□□□□ -0.25
CMTM3-201ENST00000361909 SMIM11BQ8TCY0 68 aa13.49□□□□□ -0.25
CMTM3-201ENST00000361909 FLNBO75369 2602 aaKnown RBP13.48□□□□□ -0.25
CMTM3-201ENST00000361909 USP17L23D6RBM5 183 aa13.48□□□□□ -0.25
CMTM3-201ENST00000361909 NDUFC2-KCTD14E9PQ53 114 aa13.48□□□□□ -0.25
CMTM3-201ENST00000361909 LINC00846Q9NV44 126 aa13.48□□□□□ -0.25
CMTM3-201ENST00000361909 FN1P02751 2386 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms