RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 TRAV25A0A0B4J276 109 aa9.25□□□□□ -0.93
VAMP1-201ENST00000361716 DYNLRB2Q8TF09 96 aa9.25□□□□□ -0.93
VAMP1-201ENST00000361716 C1orf43Q9BWL3 253 aa9.25□□□□□ -0.93
VAMP1-201ENST00000361716 KLLNB2CW77 178 aa9.24□□□□□ -0.93
VAMP1-201ENST00000361716 USP17L23D6RBM5 183 aa9.24□□□□□ -0.93
VAMP1-201ENST00000361716 SOCS3O14543 225 aa9.24□□□□□ -0.93
VAMP1-201ENST00000361716 LINC00158P58513 81 aa9.24□□□□□ -0.93
VAMP1-201ENST00000361716 HILS1P60008 231 aa9.24□□□□□ -0.93
VAMP1-201ENST00000361716 DEFB121Q5J5C9 76 aa9.24□□□□□ -0.93
VAMP1-201ENST00000361716 SOSTDC1Q6X4U4 206 aa9.24□□□□□ -0.93
VAMP1-201ENST00000361716 PFN2P35080 140 aa9.23□□□□□ -0.93
VAMP1-201ENST00000361716 C9orf129Q5T035 196 aaKnown RBP9.23□□□□□ -0.93
VAMP1-201ENST00000361716 LECT2O14960 151 aa9.23□□□□□ -0.93
VAMP1-201ENST00000361716 C20orf197Q8N268 126 aa9.23□□□□□ -0.93
VAMP1-201ENST00000361716 LINC00846Q9NV44 126 aa9.23□□□□□ -0.93
VAMP1-201ENST00000361716 PKIGQ9Y2B9 76 aa9.23□□□□□ -0.93
VAMP1-201ENST00000361716 DEFB112Q30KQ8 113 aa9.22□□□□□ -0.93
VAMP1-201ENST00000361716 TRGV1A0A0A0MS02 117 aa9.22□□□□□ -0.93
VAMP1-201ENST00000361716 CRYGAP11844 174 aa9.22□□□□□ -0.93
VAMP1-201ENST00000361716 SLURP1P55000 103 aa9.22□□□□□ -0.93
VAMP1-201ENST00000361716 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.22□□□□□ -0.93
VAMP1-201ENST00000361716 FAM19A4Q96LR4 140 aa9.22□□□□□ -0.93
VAMP1-201ENST00000361716 APCP25054 2843 aa9.22□□□□□ -0.93
VAMP1-201ENST00000361716 AVPP01185 164 aa9.22□□□□□ -0.93
VAMP1-201ENST00000361716 FBXL19-AS1Q494R0 122 aa9.22□□□□□ -0.93
VAMP1-201ENST00000361716 SERP2Q8N6R1 65 aa9.22□□□□□ -0.93
VAMP1-201ENST00000361716 C2orf48Q96LS8 159 aa9.22□□□□□ -0.93
VAMP1-201ENST00000361716 IGHG2P01859 326 aa9.21□□□□□ -0.93
VAMP1-201ENST00000361716 C19orf54Q5BKX5 351 aa9.21□□□□□ -0.93
VAMP1-201ENST00000361716 Q6ZSN1 163 aa9.21□□□□□ -0.93
VAMP1-201ENST00000361716 A0A087WYN8 130 aa9.21□□□□□ -0.94
VAMP1-201ENST00000361716 PAX4O43316 350 aa9.21□□□□□ -0.94
VAMP1-201ENST00000361716 FLNAP21333 2647 aaKnown RBP9.21□□□□□ -0.94
VAMP1-201ENST00000361716 RPL36AP83881 106 aaKnown RBP9.2□□□□□ -0.94
VAMP1-201ENST00000361716 RPL36ALQ969Q0 106 aaKnown RBP9.2□□□□□ -0.94
VAMP1-201ENST00000361716 C9orf85Q96MD7 179 aa9.2□□□□□ -0.94
VAMP1-201ENST00000361716 TMEM243Q9BU79 118 aa9.2□□□□□ -0.94
VAMP1-201ENST00000361716 UBE2D4Q9Y2X8 147 aa9.2□□□□□ -0.94
VAMP1-201ENST00000361716 ITPR3Q14573 2671 aa9.2□□□□□ -0.94
VAMP1-201ENST00000361716 GHRHP01286 108 aa9.2□□□□□ -0.94
VAMP1-201ENST00000361716 MSMBP08118 114 aa9.2□□□□□ -0.94
VAMP1-201ENST00000361716 C18orf65Q6ZTR6 163 aa9.2□□□□□ -0.94
VAMP1-201ENST00000361716 NDUFA1O15239 70 aa9.19□□□□□ -0.94
VAMP1-201ENST00000361716 OXTP01178 125 aa9.19□□□□□ -0.94
VAMP1-201ENST00000361716 TMEM258P61165 79 aa9.19□□□□□ -0.94
VAMP1-201ENST00000361716 C5orf38Q86SI9 138 aa9.19□□□□□ -0.94
VAMP1-201ENST00000361716 UBR5O95071 2799 aaPredicted RBP9.19□□□□□ -0.94
VAMP1-201ENST00000361716 CXCL5P42830 114 aa9.19□□□□□ -0.94
VAMP1-201ENST00000361716 MIR7-3HGQ8N6C7 128 aa9.19□□□□□ -0.94
VAMP1-201ENST00000361716 ZNF469Q96JG9 3925 aaPredicted RBP9.18□□□□□ -0.94
VAMP1-201ENST00000361716 NIPBLQ6KC79 2804 aaeCLIP9.18□□□□□ -0.94
VAMP1-201ENST00000361716 SND1-IT1Q9HBX3 110 aa9.18□□□□□ -0.94
VAMP1-201ENST00000361716 WFDC11Q8NEX6 87 aa9.17□□□□□ -0.94
VAMP1-201ENST00000361716 COPS9Q8WXC6 57 aa9.17□□□□□ -0.94
VAMP1-201ENST00000361716 PYGO1Q9Y3Y4 419 aa9.17□□□□□ -0.94
VAMP1-201ENST00000361716 ENHOQ6UWT2 76 aa9.17□□□□□ -0.94
VAMP1-201ENST00000361716 CHCHD7Q9BUK0 85 aa9.17□□□□□ -0.94
VAMP1-201ENST00000361716 MXRA5Q9NR99 2828 aa9.16□□□□□ -0.94
VAMP1-201ENST00000361716 RBMY1BA6NDE4 496 aaKnown RBP9.16□□□□□ -0.94
VAMP1-201ENST00000361716 RBMY1EA6NEQ0 496 aaKnown RBP9.16□□□□□ -0.94
VAMP1-201ENST00000361716 RBMY1DP0C7P1 496 aaKnown RBP9.16□□□□□ -0.94
VAMP1-201ENST00000361716 RBMY1A1P0DJD3 496 aaKnown RBP9.16□□□□□ -0.94
VAMP1-201ENST00000361716 RBMY1CP0DJD4 496 aa9.16□□□□□ -0.94
VAMP1-201ENST00000361716 RBMY1FQ15415 496 aaKnown RBP9.16□□□□□ -0.94
VAMP1-201ENST00000361716 FAM104AQ969W3 186 aa9.16□□□□□ -0.94
VAMP1-201ENST00000361716 FAM19A1Q7Z5A9 133 aa9.16□□□□□ -0.94
VAMP1-201ENST00000361716 A6NDX4 124 aa9.15□□□□□ -0.94
VAMP1-201ENST00000361716 UBE2L6O14933 153 aa9.15□□□□□ -0.94
VAMP1-201ENST00000361716 FHL2Q14192 279 aa9.15□□□□□ -0.94
VAMP1-201ENST00000361716 A0A0U1RQV1 116 aa9.15□□□□□ -0.94
VAMP1-201ENST00000361716 LINC01561Q8N1V8 128 aa9.15□□□□□ -0.95
VAMP1-201ENST00000361716 ZNF843Q8N446 348 aa9.15□□□□□ -0.95
VAMP1-201ENST00000361716 SMIM11BQ8TCY0 68 aa9.15□□□□□ -0.95
VAMP1-201ENST00000361716 LINC01600Q96MT4 127 aa9.15□□□□□ -0.95
VAMP1-201ENST00000361716 LINC00242Q5T6M2 205 aa9.14□□□□□ -0.95
VAMP1-201ENST00000361716 LINC00337Q8N6G1 96 aa9.14□□□□□ -0.95
VAMP1-201ENST00000361716 TRGV2A0A075B6R0 118 aa9.14□□□□□ -0.95
VAMP1-201ENST00000361716 TRAV13-2A0A0B4J235 113 aa9.14□□□□□ -0.95
VAMP1-201ENST00000361716 K7EQG2 157 aa9.14□□□□□ -0.95
VAMP1-201ENST00000361716 UNC79Q9P2D8 2635 aa9.13□□□□□ -0.95
VAMP1-201ENST00000361716 RPS28P62857 69 aaKnown RBP9.13□□□□□ -0.95
VAMP1-201ENST00000361716 ZNF415Q09FC8 603 aa9.13□□□□□ -0.95
VAMP1-201ENST00000361716 SNURFQ9Y675 71 aa9.13□□□□□ -0.95
VAMP1-201ENST00000361716 B4DSR2 109 aa9.13□□□□□ -0.95
VAMP1-201ENST00000361716 TIMM17BO60830 172 aa9.13□□□□□ -0.95
VAMP1-201ENST00000361716 SMIM1B2RUZ4 78 aa9.12□□□□□ -0.95
VAMP1-201ENST00000361716 RPL35AP18077 110 aaKnown RBP9.12□□□□□ -0.95
VAMP1-201ENST00000361716 HAMPP81172 84 aa9.12□□□□□ -0.95
VAMP1-201ENST00000361716 TEP1Q99973 2627 aaKnown RBP9.11□□□□□ -0.95
VAMP1-201ENST00000361716 C22orf24Q9Y442 160 aa9.11□□□□□ -0.95
VAMP1-201ENST00000361716 CLPSL2Q6UWE3 100 aa9.11□□□□□ -0.95
VAMP1-201ENST00000361716 STHQ8IWL8 128 aa9.11□□□□□ -0.95
VAMP1-201ENST00000361716 RPL28P46779 137 aaKnown RBP9.11□□□□□ -0.95
VAMP1-201ENST00000361716 KRTAP10-9P60411 292 aa9.1□□□□□ -0.95
VAMP1-201ENST00000361716 A0A096LPF7 62 aa9.1□□□□□ -0.95
VAMP1-201ENST00000361716 BEAN1Q3B7T3 259 aa9.1□□□□□ -0.95
VAMP1-201ENST00000361716 Q6JHZ5 121 aa9.09□□□□□ -0.95
VAMP1-201ENST00000361716 FAM236DA0A1B0GTK5 79 aa9.09□□□□□ -0.95
VAMP1-201ENST00000361716 FAM236CP0DP71 79 aa9.09□□□□□ -0.95
VAMP1-201ENST00000361716 IGLV1-40P01703 118 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms