RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 CCL18P55774 89 aa11.63□□□□□ -0.55
CLSTN1-201ENST00000361311 LINC00315P59091 139 aa11.63□□□□□ -0.55
CLSTN1-201ENST00000361311 SCXQ7RTU7 201 aa11.63□□□□□ -0.55
CLSTN1-201ENST00000361311 DEFB113Q30KQ7 82 aa11.63□□□□□ -0.55
CLSTN1-201ENST00000361311 CITED2Q99967 270 aaPredicted RBP11.63□□□□□ -0.55
CLSTN1-201ENST00000361311 FN1P02751 2386 aaKnown RBP11.63□□□□□ -0.55
CLSTN1-201ENST00000361311 ESM1Q9NQ30 184 aa11.63□□□□□ -0.55
CLSTN1-201ENST00000361311 SNURFQ9Y675 71 aa11.63□□□□□ -0.55
CLSTN1-201ENST00000361311 COX6A2Q02221 97 aa11.62□□□□□ -0.55
CLSTN1-201ENST00000361311 IGLV1-40P01703 118 aa11.62□□□□□ -0.55
CLSTN1-201ENST00000361311 MPLKIPQ8TAP9 179 aa11.62□□□□□ -0.55
CLSTN1-201ENST00000361311 CDC42SE2Q9NRR3 84 aa11.61□□□□□ -0.55
CLSTN1-201ENST00000361311 CAMK2N2Q96S95 79 aa11.61□□□□□ -0.55
CLSTN1-201ENST00000361311 HTTP42858 3142 aa11.61□□□□□ -0.55
CLSTN1-201ENST00000361311 A0A0U1RQV1 116 aa11.6□□□□□ -0.55
CLSTN1-201ENST00000361311 HIGD2BQ4VC39 106 aa11.6□□□□□ -0.55
CLSTN1-201ENST00000361311 NDUFC2-KCTD14E9PQ53 114 aa11.6□□□□□ -0.55
CLSTN1-201ENST00000361311 PRB2P02812 416 aaPredicted RBP11.6□□□□□ -0.55
CLSTN1-201ENST00000361311 LAMA2P24043 3122 aaKnown RBP11.6□□□□□ -0.55
CLSTN1-201ENST00000361311 DEFB114Q30KQ6 69 aa11.6□□□□□ -0.55
CLSTN1-201ENST00000361311 C4orf3Q8WVX3 66 aa11.59□□□□□ -0.55
CLSTN1-201ENST00000361311 WFDC11Q8NEX6 87 aa11.59□□□□□ -0.55
CLSTN1-201ENST00000361311 TRBV6-8A0A0A6YYG3 113 aa11.59□□□□□ -0.55
CLSTN1-201ENST00000361311 A0A087WYN8 130 aa11.59□□□□□ -0.55
CLSTN1-201ENST00000361311 CCKP06307 115 aa11.58□□□□□ -0.56
CLSTN1-201ENST00000361311 NHLRC4P0CG21 123 aaPredicted RBP11.58□□□□□ -0.56
CLSTN1-201ENST00000361311 COX7BP24311 80 aa11.57□□□□□ -0.56
CLSTN1-201ENST00000361311 LINC00846Q9NV44 126 aa11.57□□□□□ -0.56
CLSTN1-201ENST00000361311 FLNBO75369 2602 aaKnown RBP11.57□□□□□ -0.56
CLSTN1-201ENST00000361311 LINC00269Q8N2A0 174 aa11.56□□□□□ -0.56
CLSTN1-201ENST00000361311 PRO0255Q9UI72 69 aa11.56□□□□□ -0.56
CLSTN1-201ENST00000361311 BPY2O14599 106 aa11.55□□□□□ -0.56
CLSTN1-201ENST00000361311 DEFB121Q5J5C9 76 aa11.55□□□□□ -0.56
CLSTN1-201ENST00000361311 TRBV6-4A0A1B0GX49 114 aa11.55□□□□□ -0.56
CLSTN1-201ENST00000361311 DOPEY1Q5JWR5 2465 aa11.55□□□□□ -0.56
CLSTN1-201ENST00000361311 NDUFC1O43677 76 aa11.55□□□□□ -0.56
CLSTN1-201ENST00000361311 KLK12Q9UKR0 248 aa11.54□□□□□ -0.56
CLSTN1-201ENST00000361311 APOC4P55056 127 aa11.54□□□□□ -0.56
CLSTN1-201ENST00000361311 CDSNQ15517 529 aa11.54□□□□□ -0.56
CLSTN1-201ENST00000361311 Q6ZQY7 126 aa11.54□□□□□ -0.56
CLSTN1-201ENST00000361311 LOC100131303A0A0U1RQF7 123 aa11.53□□□□□ -0.56
CLSTN1-201ENST00000361311 Q6ZSN1 163 aa11.53□□□□□ -0.56
CLSTN1-201ENST00000361311 Q8N2B8 174 aa11.53□□□□□ -0.56
CLSTN1-201ENST00000361311 CHCHD10Q8WYQ3 142 aaPredicted RBP11.53□□□□□ -0.56
CLSTN1-201ENST00000361311 SMIM26A0A096LP01 95 aa11.53□□□□□ -0.56
CLSTN1-201ENST00000361311 POLQO75417 2590 aa11.53□□□□□ -0.56
CLSTN1-201ENST00000361311 CRYGAP11844 174 aa11.53□□□□□ -0.56
CLSTN1-201ENST00000361311 C19orf84I3L1E1 186 aa11.53□□□□□ -0.56
CLSTN1-201ENST00000361311 ZNF843Q8N446 348 aa11.52□□□□□ -0.57
CLSTN1-201ENST00000361311 TRAV7A0A075B6U4 112 aa11.52□□□□□ -0.57
CLSTN1-201ENST00000361311 REG3AQ06141 175 aa11.52□□□□□ -0.57
CLSTN1-201ENST00000361311 ETDCA0A1B0GVM5 59 aa11.51□□□□□ -0.57
CLSTN1-201ENST00000361311 SERP1Q9Y6X1 66 aa11.51□□□□□ -0.57
CLSTN1-201ENST00000361311 LINC00959A0A1B0GUT2 108 aa11.51□□□□□ -0.57
CLSTN1-201ENST00000361311 IGKV2D-24A0A075B6R9 120 aa11.5□□□□□ -0.57
CLSTN1-201ENST00000361311 PKD1L2Q7Z442 2459 aa11.5□□□□□ -0.57
CLSTN1-201ENST00000361311 ATP5EP56381 51 aaPredicted RBP11.5□□□□□ -0.57
CLSTN1-201ENST00000361311 LINC00337Q8N6G1 96 aa11.5□□□□□ -0.57
CLSTN1-201ENST00000361311 DEFB4AO15263 64 aa11.5□□□□□ -0.57
CLSTN1-201ENST00000361311 MP68P56378 58 aa11.5□□□□□ -0.57
CLSTN1-201ENST00000361311 FAM19A1Q7Z5A9 133 aa11.5□□□□□ -0.57
CLSTN1-201ENST00000361311 FAM19A4Q96LR4 140 aa11.5□□□□□ -0.57
CLSTN1-201ENST00000361311 NTM-AS1Q6ZSK4 140 aa11.49□□□□□ -0.57
CLSTN1-201ENST00000361311 XAGE1AQ9HD64 81 aa11.48□□□□□ -0.57
CLSTN1-201ENST00000361311 UBE2BP63146 152 aa11.48□□□□□ -0.57
CLSTN1-201ENST00000361311 Q8N814 137 aa11.48□□□□□ -0.57
CLSTN1-201ENST00000361311 V9GYY9 64 aa11.47□□□□□ -0.57
CLSTN1-201ENST00000361311 CFAP54Q96N23 3096 aa11.47□□□□□ -0.57
CLSTN1-201ENST00000361311 IGLV5-39A0A0G2JS06 123 aa11.47□□□□□ -0.57
CLSTN1-201ENST00000361311 BRI3O95415 125 aa11.47□□□□□ -0.57
CLSTN1-201ENST00000361311 HILS1P60008 231 aa11.47□□□□□ -0.57
CLSTN1-201ENST00000361311 MTORP42345 2549 aa11.47□□□□□ -0.57
CLSTN1-201ENST00000361311 RPS28P62857 69 aaKnown RBP11.47□□□□□ -0.57
CLSTN1-201ENST00000361311 C18orf65Q6ZTR6 163 aa11.47□□□□□ -0.57
CLSTN1-201ENST00000361311 Q6YL49 198 aa11.46□□□□□ -0.57
CLSTN1-201ENST00000361311 PCSK5Q92824 1860 aa11.46□□□□□ -0.58
CLSTN1-201ENST00000361311 MKI67P46013 3256 aaKnown RBP11.45□□□□□ -0.58
CLSTN1-201ENST00000361311 SPART-AS1P0CW21 52 aa11.45□□□□□ -0.58
CLSTN1-201ENST00000361311 CDK2AP2O75956 126 aa11.45□□□□□ -0.58
CLSTN1-201ENST00000361311 MIFP14174 115 aa11.44□□□□□ -0.58
CLSTN1-201ENST00000361311 PRR3P79522 188 aaKnown RBP11.44□□□□□ -0.58
CLSTN1-201ENST00000361311 Q8IZM0 81 aa11.44□□□□□ -0.58
CLSTN1-201ENST00000361311 FAM218AQ96MZ4 157 aa11.44□□□□□ -0.58
CLSTN1-201ENST00000361311 CHD9Q3L8U1 2897 aa11.44□□□□□ -0.58
CLSTN1-201ENST00000361311 DEFB135Q30KP9 77 aa11.44□□□□□ -0.58
CLSTN1-201ENST00000361311 FAM19A3Q7Z5A8 133 aa11.44□□□□□ -0.58
CLSTN1-201ENST00000361311 KIR2DL5BQ8NHK3 375 aa11.44□□□□□ -0.58
CLSTN1-201ENST00000361311 A0A087WZ39 114 aa11.44□□□□□ -0.58
CLSTN1-201ENST00000361311 LITAFQ99732 161 aa11.44□□□□□ -0.58
CLSTN1-201ENST00000361311 SOSTDC1Q6X4U4 206 aa11.44□□□□□ -0.58
CLSTN1-201ENST00000361311 CD164L2Q6UWJ8 174 aa11.43□□□□□ -0.58
CLSTN1-201ENST00000361311 ZNF702PQ9H963 129 aa11.43□□□□□ -0.58
CLSTN1-201ENST00000361311 A0A1W2PPR1 153 aa11.43□□□□□ -0.58
CLSTN1-201ENST00000361311 BEAN1Q3B7T3 259 aa11.43□□□□□ -0.58
CLSTN1-201ENST00000361311 IGLV4-60A0A075B6I1 120 aa11.42□□□□□ -0.58
CLSTN1-201ENST00000361311 AVPP01185 164 aa11.42□□□□□ -0.58
CLSTN1-201ENST00000361311 C1orf195Q5TG92 126 aa11.41□□□□□ -0.58
CLSTN1-201ENST00000361311 C3orf84H3BNL1 204 aa11.4□□□□□ -0.58
CLSTN1-201ENST00000361311 Q9UF83 564 aa11.4□□□□□ -0.58
CLSTN1-201ENST00000361311 Q8N3U1 123 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms