RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 IGLV4-69A0A075B6H9 119 aa9.65□□□□□ -0.86
DDX55-202ENST00000354291 D6R8Y8 96 aa9.65□□□□□ -0.86
DDX55-202ENST00000354291 APOMO95445 188 aa9.65□□□□□ -0.86
DDX55-202ENST00000354291 SMIM2Q9BVW6 85 aa9.65□□□□□ -0.86
DDX55-202ENST00000354291 LOC107984640A0A0U1RRK4 108 aa9.64□□□□□ -0.87
DDX55-202ENST00000354291 A0A1B0GXF2 115 aa9.64□□□□□ -0.87
DDX55-202ENST00000354291 MT-ND6P03923 174 aa9.64□□□□□ -0.87
DDX55-202ENST00000354291 Q6ZUT4 128 aa9.64□□□□□ -0.87
DDX55-202ENST00000354291 C2orf48Q96LS8 159 aa9.64□□□□□ -0.87
DDX55-202ENST00000354291 PTTG1IPP53801 180 aa9.63□□□□□ -0.87
DDX55-202ENST00000354291 C5orf38Q86SI9 138 aa9.63□□□□□ -0.87
DDX55-202ENST00000354291 CAMK2N2Q96S95 79 aa9.63□□□□□ -0.87
DDX55-202ENST00000354291 SPANXA1Q9NS26 97 aa9.63□□□□□ -0.87
DDX55-202ENST00000354291 FSIP2Q5CZC0 6907 aa9.63□□□□□ -0.87
DDX55-202ENST00000354291 RPL39P62891 51 aaKnown RBP9.62□□□□□ -0.87
DDX55-202ENST00000354291 ATP5L2Q7Z4Y8 100 aa9.62□□□□□ -0.87
DDX55-202ENST00000354291 NPYP01303 97 aa9.61□□□□□ -0.87
DDX55-202ENST00000354291 RAB5AP20339 215 aa9.61□□□□□ -0.87
DDX55-202ENST00000354291 MRPS36P82909 103 aaKnown RBP9.61□□□□□ -0.87
DDX55-202ENST00000354291 GAGE2BQ13066 116 aa9.61□□□□□ -0.87
DDX55-202ENST00000354291 C1orf137Q5JT78 98 aa9.61□□□□□ -0.87
DDX55-202ENST00000354291 TMEM136Q6ZRR5 245 aa9.61□□□□□ -0.87
DDX55-202ENST00000354291 ORMDL3Q8N138 153 aa9.61□□□□□ -0.87
DDX55-202ENST00000354291 OR10D4PQ8NGN7 298 aa9.6□□□□□ -0.87
DDX55-202ENST00000354291 F8WDY8 70 aa9.59□□□□□ -0.87
DDX55-202ENST00000354291 RNF151Q2KHN1 245 aa9.59□□□□□ -0.87
DDX55-202ENST00000354291 FAM104AQ969W3 186 aa9.59□□□□□ -0.87
DDX55-202ENST00000354291 PRELID3AQ96N28 172 aa9.59□□□□□ -0.87
DDX55-202ENST00000354291 IGHV3OR16-9A0A0B4J2B5 98 aa9.58□□□□□ -0.88
DDX55-202ENST00000354291 A0A1W2PNN7 141 aa9.58□□□□□ -0.88
DDX55-202ENST00000354291 SPAG11BQ08648 103 aa9.58□□□□□ -0.88
DDX55-202ENST00000354291 PNRC1Q12796 327 aaPredicted RBP9.58□□□□□ -0.88
DDX55-202ENST00000354291 DIRC1Q969H9 104 aa9.58□□□□□ -0.88
DDX55-202ENST00000354291 OPRPNQ99935 248 aaPredicted RBP9.58□□□□□ -0.88
DDX55-202ENST00000354291 IFITM10A6NMD0 228 aa9.57□□□□□ -0.88
DDX55-202ENST00000354291 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.57□□□□□ -0.88
DDX55-202ENST00000354291 IFI27P40305 119 aaPredicted RBP9.57□□□□□ -0.88
DDX55-202ENST00000354291 RAB14P61106 215 aa9.57□□□□□ -0.88
DDX55-202ENST00000354291 LAMTOR2Q9Y2Q5 125 aa9.57□□□□□ -0.88
DDX55-202ENST00000354291 PRSS47A8MTI9 375 aa9.56□□□□□ -0.88
DDX55-202ENST00000354291 MT-ND4LP03901 98 aa9.56□□□□□ -0.88
DDX55-202ENST00000354291 RPL18AQ02543 176 aaKnown RBP9.56□□□□□ -0.88
DDX55-202ENST00000354291 ORAOV1Q8WV07 137 aa9.56□□□□□ -0.88
DDX55-202ENST00000354291 ANAPC16Q96DE5 110 aa9.56□□□□□ -0.88
DDX55-202ENST00000354291 PYGO1Q9Y3Y4 419 aa9.56□□□□□ -0.88
DDX55-202ENST00000354291 IMMP2LQ96T52 175 aa9.55□□□□□ -0.88
DDX55-202ENST00000354291 MRPL35Q9NZE8 188 aaKnown RBP9.55□□□□□ -0.88
DDX55-202ENST00000354291 IGLV1-50A0A075B6I6 118 aa9.54□□□□□ -0.88
DDX55-202ENST00000354291 TGIF2-C20orf24A0A0A6YYL0 155 aa9.54□□□□□ -0.88
DDX55-202ENST00000354291 NDUFA1O15239 70 aa9.54□□□□□ -0.88
DDX55-202ENST00000354291 C9orf116Q5BN46 136 aaPredicted RBP9.54□□□□□ -0.88
DDX55-202ENST00000354291 CRCT1Q9UGL9 99 aa9.54□□□□□ -0.88
DDX55-202ENST00000354291 IGLV7-43P04211 117 aa9.53□□□□□ -0.88
DDX55-202ENST00000354291 PHF5AQ7RTV0 110 aaKnown RBP9.53□□□□□ -0.88
DDX55-202ENST00000354291 TMEM141Q96I45 108 aa9.53□□□□□ -0.88
DDX55-202ENST00000354291 MAP1LC3AQ9H492 121 aa9.53□□□□□ -0.88
DDX55-202ENST00000354291 A0A087WZ39 114 aa9.52□□□□□ -0.89
DDX55-202ENST00000354291 LOC389332A0A1B0GUA5 103 aa9.52□□□□□ -0.89
DDX55-202ENST00000354291 H0Y9J4 135 aa9.52□□□□□ -0.89
DDX55-202ENST00000354291 TSPAN13O95857 204 aa9.52□□□□□ -0.89
DDX55-202ENST00000354291 UBE2D1P51668 147 aa9.52□□□□□ -0.89
DDX55-202ENST00000354291 IGLV4-3A0A075B6K6 122 aa9.51□□□□□ -0.89
DDX55-202ENST00000354291 LINC00242Q5T6M2 205 aa9.51□□□□□ -0.89
DDX55-202ENST00000354291 TEX43Q6ZNM6 134 aa9.51□□□□□ -0.89
DDX55-202ENST00000354291 Q8N8P6 123 aa9.51□□□□□ -0.89
DDX55-202ENST00000354291 TLX1NBP0CAT3 122 aa9.5□□□□□ -0.89
DDX55-202ENST00000354291 UNQ6190/PRO20217Q6UXQ8 127 aa9.5□□□□□ -0.89
DDX55-202ENST00000354291 CYSLTR1Q9Y271 337 aa9.5□□□□□ -0.89
DDX55-202ENST00000354291 K7EMI3 77 aa9.49□□□□□ -0.89
DDX55-202ENST00000354291 ORMDL2Q53FV1 153 aa9.49□□□□□ -0.89
DDX55-202ENST00000354291 C10orf25Q5T742 122 aa9.49□□□□□ -0.89
DDX55-202ENST00000354291 C2orf66Q6UXQ4 117 aa9.49□□□□□ -0.89
DDX55-202ENST00000354291 Q6ZN92 141 aa9.49□□□□□ -0.89
DDX55-202ENST00000354291 C2orf88Q9BSF0 95 aa9.49□□□□□ -0.89
DDX55-202ENST00000354291 NPSP0C0P6 89 aa9.48□□□□□ -0.89
DDX55-202ENST00000354291 KIAA0087Q14695 138 aa9.48□□□□□ -0.89
DDX55-202ENST00000354291 LINC01561Q8N1V8 128 aa9.48□□□□□ -0.89
DDX55-202ENST00000354291 CTDSP1Q9GZU7 261 aa9.48□□□□□ -0.89
DDX55-202ENST00000354291 VCX2Q9H322 139 aa9.48□□□□□ -0.89
DDX55-202ENST00000354291 C6orf48Q9UBA6 75 aa9.48□□□□□ -0.89
DDX55-202ENST00000354291 KRTAP1-4P0C5Y4 121 aa9.47□□□□□ -0.89
DDX55-202ENST00000354291 G0S2P27469 103 aa9.47□□□□□ -0.89
DDX55-202ENST00000354291 LCE2DQ5TA82 110 aaPredicted RBP9.47□□□□□ -0.89
DDX55-202ENST00000354291 NXT2Q9NPJ8 142 aaKnown RBP9.47□□□□□ -0.89
DDX55-202ENST00000354291 TRBV30A0A0K0K1B3 111 aa9.46□□□□□ -0.9
DDX55-202ENST00000354291 RPL13AP40429 203 aaKnown RBP9.46□□□□□ -0.9
DDX55-202ENST00000354291 CLLU1Q5K131 121 aa9.46□□□□□ -0.9
DDX55-202ENST00000354291 AMELXQ99217 191 aa9.46□□□□□ -0.9
DDX55-202ENST00000354291 MUC17Q685J3 4493 aa9.45□□□□□ -0.9
DDX55-202ENST00000354291 GAGE2EQ4V326 116 aa9.45□□□□□ -0.9
DDX55-202ENST00000354291 PAPPA-AS1Q5QFB9 102 aa9.45□□□□□ -0.9
DDX55-202ENST00000354291 PACRGQ96M98 296 aaPredicted RBP9.45□□□□□ -0.9
DDX55-202ENST00000354291 GAGE2DQ9UEU5 116 aa9.45□□□□□ -0.9
DDX55-202ENST00000354291 IGIPA6NJ69 53 aa9.44□□□□□ -0.9
DDX55-202ENST00000354291 LINC00173Q6ZV60 143 aa9.44□□□□□ -0.9
DDX55-202ENST00000354291 FAM168BA1KXE4 195 aa9.43□□□□□ -0.9
DDX55-202ENST00000354291 NDUFC2-KCTD14E9PQ53 114 aa9.43□□□□□ -0.9
DDX55-202ENST00000354291 SEC11AP67812 179 aa9.43□□□□□ -0.9
DDX55-202ENST00000354291 UQCC3Q6UW78 93 aa9.43□□□□□ -0.9
DDX55-202ENST00000354291 C2orf82Q6UX34 121 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms