RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 Q6ZTI0 123 aa7.69□□□□□ -1.18
CAPRIN1-201ENST00000341394 WFDC10AQ9H1F0 79 aa7.69□□□□□ -1.18
CAPRIN1-201ENST00000341394 NBEAL1Q6ZS30 2694 aa7.69□□□□□ -1.18
CAPRIN1-201ENST00000341394 DEFB105AQ8NG35 78 aa7.69□□□□□ -1.18
CAPRIN1-201ENST00000341394 LINC01006Q8NI28 216 aa7.69□□□□□ -1.18
CAPRIN1-201ENST00000341394 Q9UF83 564 aa7.69□□□□□ -1.18
CAPRIN1-201ENST00000341394 TRBV10-2A0A0K0K1G8 114 aa7.68□□□□□ -1.18
CAPRIN1-201ENST00000341394 IGHV3-30P01768 117 aa7.68□□□□□ -1.18
CAPRIN1-201ENST00000341394 IGHV3-30-5P0DP03 117 aa7.68□□□□□ -1.18
CAPRIN1-201ENST00000341394 GPHB5Q86YW7 130 aa7.68□□□□□ -1.18
CAPRIN1-201ENST00000341394 WFDC9Q8NEX5 89 aa7.68□□□□□ -1.18
CAPRIN1-201ENST00000341394 CITED2Q99967 270 aaPredicted RBP7.68□□□□□ -1.18
CAPRIN1-201ENST00000341394 A0A0J9YX75 114 aa7.68□□□□□ -1.18
CAPRIN1-201ENST00000341394 POM121L12Q8N7R1 296 aa7.68□□□□□ -1.18
CAPRIN1-201ENST00000341394 TRAV23DV6A0A075B6W5 121 aa7.67□□□□□ -1.18
CAPRIN1-201ENST00000341394 DAZ2Q13117 558 aaKnown RBP7.67□□□□□ -1.18
CAPRIN1-201ENST00000341394 DAZ4Q86SG3 579 aaKnown RBP7.67□□□□□ -1.18
CAPRIN1-201ENST00000341394 DAZ3Q9NR90 486 aaKnown RBP7.67□□□□□ -1.18
CAPRIN1-201ENST00000341394 SCXQ7RTU7 201 aa7.67□□□□□ -1.18
CAPRIN1-201ENST00000341394 VSIG2Q96IQ7 327 aa7.67□□□□□ -1.18
CAPRIN1-201ENST00000341394 BRI3O95415 125 aa7.67□□□□□ -1.18
CAPRIN1-201ENST00000341394 KLK9Q2XQG4 91 aa7.67□□□□□ -1.18
CAPRIN1-201ENST00000341394 TIMM17AQ99595 171 aa7.67□□□□□ -1.18
CAPRIN1-201ENST00000341394 KLK5Q9Y337 293 aaPredicted RBP7.67□□□□□ -1.18
CAPRIN1-201ENST00000341394 IGHV1-58A0A0C4DH39 117 aa7.66□□□□□ -1.18
CAPRIN1-201ENST00000341394 TRBV6-1A0A0K0K1D8 114 aa7.66□□□□□ -1.18
CAPRIN1-201ENST00000341394 M0QY20 66 aa7.66□□□□□ -1.18
CAPRIN1-201ENST00000341394 LENEPQ9Y5L5 61 aa7.66□□□□□ -1.18
CAPRIN1-201ENST00000341394 LOC100131303A0A0U1RQF7 123 aa7.66□□□□□ -1.18
CAPRIN1-201ENST00000341394 NCR3O14931 201 aa7.66□□□□□ -1.18
CAPRIN1-201ENST00000341394 CCL24O00175 119 aa7.65□□□□□ -1.18
CAPRIN1-201ENST00000341394 HERVK_113P63121 156 aa7.65□□□□□ -1.18
CAPRIN1-201ENST00000341394 COX7B2Q8TF08 81 aa7.65□□□□□ -1.18
CAPRIN1-201ENST00000341394 hADV29S1A0JD25 119 aa7.65□□□□□ -1.18
CAPRIN1-201ENST00000341394 ADAMTSL4-AS1Q5T5F5 129 aa7.65□□□□□ -1.18
CAPRIN1-201ENST00000341394 Q8N2B8 174 aa7.65□□□□□ -1.18
CAPRIN1-201ENST00000341394 K7EMT4 169 aa7.65□□□□□ -1.19
CAPRIN1-201ENST00000341394 C4orf3Q8WVX3 66 aa7.65□□□□□ -1.19
CAPRIN1-201ENST00000341394 INAFM2P0DMQ5 153 aa7.64□□□□□ -1.19
CAPRIN1-201ENST00000341394 NOTCH1P46531 2555 aa7.64□□□□□ -1.19
CAPRIN1-201ENST00000341394 TRACP01848 142 aa7.64□□□□□ -1.19
CAPRIN1-201ENST00000341394 SS18Q15532 418 aa7.64□□□□□ -1.19
CAPRIN1-201ENST00000341394 TMEM223A0PJW6 202 aa7.63□□□□□ -1.19
CAPRIN1-201ENST00000341394 MRAPQ8TCY5 172 aa7.63□□□□□ -1.19
CAPRIN1-201ENST00000341394 A0A087WVE0 104 aa7.63□□□□□ -1.19
CAPRIN1-201ENST00000341394 SMCPP49901 116 aaPredicted RBP7.63□□□□□ -1.19
CAPRIN1-201ENST00000341394 GYPEP15421 78 aa7.63□□□□□ -1.19
CAPRIN1-201ENST00000341394 SPATA25Q9BR10 227 aa7.63□□□□□ -1.19
CAPRIN1-201ENST00000341394 TSHBP01222 138 aa7.62□□□□□ -1.19
CAPRIN1-201ENST00000341394 CRYGDP07320 174 aa7.62□□□□□ -1.19
CAPRIN1-201ENST00000341394 PRR3P79522 188 aaKnown RBP7.62□□□□□ -1.19
CAPRIN1-201ENST00000341394 MIAQ16674 131 aa7.62□□□□□ -1.19
CAPRIN1-201ENST00000341394 DCANP1Q8TF63 244 aa7.62□□□□□ -1.19
CAPRIN1-201ENST00000341394 IGLV4-69A0A075B6H9 119 aa7.61□□□□□ -1.19
CAPRIN1-201ENST00000341394 POLR2KP53803 58 aaKnown RBP7.61□□□□□ -1.19
CAPRIN1-201ENST00000341394 UBL5Q9BZL1 73 aa7.61□□□□□ -1.19
CAPRIN1-201ENST00000341394 IGLV2-18A0A075B6J9 118 aa7.61□□□□□ -1.19
CAPRIN1-201ENST00000341394 H7C423 109 aa7.61□□□□□ -1.19
CAPRIN1-201ENST00000341394 CDIP1Q9H305 208 aa7.61□□□□□ -1.19
CAPRIN1-201ENST00000341394 RBM3P98179 157 aaKnown RBP7.6□□□□□ -1.19
CAPRIN1-201ENST00000341394 IGIPA6NJ69 53 aa7.6□□□□□ -1.19
CAPRIN1-201ENST00000341394 LINC00308Q8TCZ7 52 aa7.6□□□□□ -1.19
CAPRIN1-201ENST00000341394 TRAV13-2A0A0B4J235 113 aa7.6□□□□□ -1.19
CAPRIN1-201ENST00000341394 C20orf197Q8N268 126 aa7.6□□□□□ -1.19
CAPRIN1-201ENST00000341394 SPANXA1Q9NS26 97 aa7.6□□□□□ -1.19
CAPRIN1-201ENST00000341394 RNF152Q8N8N0 203 aa7.59□□□□□ -1.19
CAPRIN1-201ENST00000341394 C16orf95Q9H693 158 aa7.59□□□□□ -1.19
CAPRIN1-201ENST00000341394 DEFB121Q5J5C9 76 aa7.59□□□□□ -1.19
CAPRIN1-201ENST00000341394 FBN1P35555 2871 aaKnown RBP7.59□□□□□ -1.19
CAPRIN1-201ENST00000341394 Q6ZSN1 163 aa7.59□□□□□ -1.19
CAPRIN1-201ENST00000341394 LOC107984640A0A0U1RRK4 108 aa7.58□□□□□ -1.2
CAPRIN1-201ENST00000341394 UBE2D1P51668 147 aa7.58□□□□□ -1.2
CAPRIN1-201ENST00000341394 RPL32P62910 135 aaKnown RBP7.58□□□□□ -1.2
CAPRIN1-201ENST00000341394 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.58□□□□□ -1.2
CAPRIN1-201ENST00000341394 XAGE1AQ9HD64 81 aa7.58□□□□□ -1.2
CAPRIN1-201ENST00000341394 K7EQG2 157 aa7.58□□□□□ -1.2
CAPRIN1-201ENST00000341394 COX6A2Q02221 97 aa7.58□□□□□ -1.2
CAPRIN1-201ENST00000341394 DEFB135Q30KP9 77 aa7.58□□□□□ -1.2
CAPRIN1-201ENST00000341394 ATP6V0E2Q8NHE4 81 aa7.58□□□□□ -1.2
CAPRIN1-201ENST00000341394 TMEM263Q8WUH6 116 aaKnown RBP7.58□□□□□ -1.2
CAPRIN1-201ENST00000341394 ZMAT4Q9H898 229 aa7.58□□□□□ -1.2
CAPRIN1-201ENST00000341394 A0A0B4J2C4 111 aa7.58□□□□□ -1.2
CAPRIN1-201ENST00000341394 TRBV27A0A0K0K1C4 114 aa7.58□□□□□ -1.2
CAPRIN1-201ENST00000341394 K7EQD1 137 aa7.58□□□□□ -1.2
CAPRIN1-201ENST00000341394 C1orf43Q9BWL3 253 aa7.58□□□□□ -1.2
CAPRIN1-201ENST00000341394 LINC00694P0DN24 101 aa7.57□□□□□ -1.2
CAPRIN1-201ENST00000341394 LINC00269Q8N2A0 174 aa7.57□□□□□ -1.2
CAPRIN1-201ENST00000341394 MAP6D1Q9H9H5 199 aa7.57□□□□□ -1.2
CAPRIN1-201ENST00000341394 ORMDL1Q9P0S3 153 aa7.57□□□□□ -1.2
CAPRIN1-201ENST00000341394 CNFNQ9BYD5 112 aa7.57□□□□□ -1.2
CAPRIN1-201ENST00000341394 RPL18AQ02543 176 aaKnown RBP7.56□□□□□ -1.2
CAPRIN1-201ENST00000341394 RBMY1FQ15415 496 aaKnown RBP7.56□□□□□ -1.2
CAPRIN1-201ENST00000341394 DNAJC30Q96LL9 226 aa7.56□□□□□ -1.2
CAPRIN1-201ENST00000341394 PKD1L1Q8TDX9 2849 aa7.56□□□□□ -1.2
CAPRIN1-201ENST00000341394 H3BT86 120 aa7.56□□□□□ -1.2
CAPRIN1-201ENST00000341394 ZNF561-AS1K7EIQ3 104 aa7.56□□□□□ -1.2
CAPRIN1-201ENST00000341394 KLK12Q9UKR0 248 aa7.56□□□□□ -1.2
CAPRIN1-201ENST00000341394 CYSRT1A8MQ03 144 aa7.55□□□□□ -1.2
CAPRIN1-201ENST00000341394 SHISA2Q6UWI4 295 aa7.55□□□□□ -1.2
CAPRIN1-201ENST00000341394 ENHOQ6UWT2 76 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms