RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 TRAV13-1A0A0B4J241 112 aa5.42□□□□□ -1.54
ATXN3-201ENST00000340660 UPK1BO75841 260 aa5.42□□□□□ -1.54
ATXN3-201ENST00000340660 AQP4P55087 323 aa5.42□□□□□ -1.54
ATXN3-201ENST00000340660 HBG1P69891 147 aa5.42□□□□□ -1.54
ATXN3-201ENST00000340660 HBG2P69892 147 aa5.42□□□□□ -1.54
ATXN3-201ENST00000340660 KIAA0087Q14695 138 aa5.42□□□□□ -1.54
ATXN3-201ENST00000340660 ATP6V1FQ16864 119 aa5.42□□□□□ -1.54
ATXN3-201ENST00000340660 PQLC2Q6ZP29 291 aa5.42□□□□□ -1.54
ATXN3-201ENST00000340660 FAM19A1Q7Z5A9 133 aa5.42□□□□□ -1.54
ATXN3-201ENST00000340660 PAM16Q9Y3D7 125 aa5.42□□□□□ -1.54
ATXN3-201ENST00000340660 LSM5Q9Y4Y9 91 aaKnown RBP5.42□□□□□ -1.54
ATXN3-201ENST00000340660 AHNAK2Q8IVF2 5795 aa5.41□□□□□ -1.54
ATXN3-201ENST00000340660 ZNF727A8MUV8 499 aa5.41□□□□□ -1.54
ATXN3-201ENST00000340660 CTDSP2O14595 271 aa5.41□□□□□ -1.54
ATXN3-201ENST00000340660 RNASE13Q5GAN3 156 aaKnown RBP5.41□□□□□ -1.54
ATXN3-201ENST00000340660 CBLN2Q8IUK8 224 aa5.41□□□□□ -1.54
ATXN3-201ENST00000340660 MRPS26Q9BYN8 205 aaKnown RBP5.41□□□□□ -1.54
ATXN3-201ENST00000340660 C9orf170A2RU37 121 aa5.4□□□□□ -1.54
ATXN3-201ENST00000340660 HMGB3O15347 200 aaKnown RBP5.4□□□□□ -1.54
ATXN3-201ENST00000340660 FOXA3P55318 350 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-201ENST00000340660 RPL32P62910 135 aaKnown RBP5.4□□□□□ -1.54
ATXN3-201ENST00000340660 MRPS10P82664 201 aaKnown RBP5.4□□□□□ -1.54
ATXN3-201ENST00000340660 KRTAP5-10Q6L8G5 202 aa5.4□□□□□ -1.54
ATXN3-201ENST00000340660 MRPL52Q86TS9 123 aaKnown RBP5.4□□□□□ -1.54
ATXN3-201ENST00000340660 MCFD2Q8NI22 146 aa5.4□□□□□ -1.54
ATXN3-201ENST00000340660 KCNIP2Q9NS61 270 aa5.4□□□□□ -1.54
ATXN3-201ENST00000340660 CHTOPQ9Y3Y2 248 aaKnown RBP5.4□□□□□ -1.54
ATXN3-201ENST00000340660 NCS1P62166 190 aa5.39□□□□□ -1.55
ATXN3-201ENST00000340660 STX12Q86Y82 276 aa5.39□□□□□ -1.55
ATXN3-201ENST00000340660 GNB1LQ9BYB4 327 aa5.39□□□□□ -1.55
ATXN3-201ENST00000340660 WDR61Q9GZS3 305 aaKnown RBP5.39□□□□□ -1.55
ATXN3-201ENST00000340660 IGKV2-28A0A075B6P5 120 aa5.38□□□□□ -1.55
ATXN3-201ENST00000340660 IGKV2D-28P01615 120 aa5.38□□□□□ -1.55
ATXN3-201ENST00000340660 CXCL1P09341 107 aa5.38□□□□□ -1.55
ATXN3-201ENST00000340660 MOBPQ13875 183 aa5.38□□□□□ -1.55
ATXN3-201ENST00000340660 CCDC32Q9BV29 185 aa5.38□□□□□ -1.55
ATXN3-201ENST00000340660 HIGD2AQ9BW72 106 aa5.38□□□□□ -1.55
ATXN3-201ENST00000340660 VCXQ9H320 206 aa5.38□□□□□ -1.55
ATXN3-201ENST00000340660 IGHV3OR16-9A0A0B4J2B5 98 aa5.36□□□□□ -1.55
ATXN3-201ENST00000340660 TMEM238C9JI98 176 aa5.36□□□□□ -1.55
ATXN3-201ENST00000340660 ARL14EPLP0DKL9 152 aa5.36□□□□□ -1.55
ATXN3-201ENST00000340660 CNBD2Q96M20 576 aa5.36□□□□□ -1.55
ATXN3-201ENST00000340660 KRTAP5-4Q6L8H1 288 aa5.35□□□□□ -1.55
ATXN3-201ENST00000340660 KRTAP4-4Q9BYR3 166 aa5.35□□□□□ -1.55
ATXN3-201ENST00000340660 TMEM126AQ9H061 195 aa5.35□□□□□ -1.55
ATXN3-201ENST00000340660 GEMIN7Q9H840 131 aaKnown RBP5.35□□□□□ -1.55
ATXN3-201ENST00000340660 C17orf112F2Z3M2 114 aa5.34□□□□□ -1.55
ATXN3-201ENST00000340660 SCO1O75880 301 aa5.34□□□□□ -1.55
ATXN3-201ENST00000340660 GATD1Q8NB37 220 aa5.34□□□□□ -1.55
ATXN3-201ENST00000340660 RPL39LQ96EH5 51 aaKnown RBP5.34□□□□□ -1.55
ATXN3-201ENST00000340660 MRAP2Q96G30 205 aa5.34□□□□□ -1.55
ATXN3-201ENST00000340660 IGLV9-49A0A0B4J1Y8 123 aa5.33□□□□□ -1.56
ATXN3-201ENST00000340660 KRTAP5-7Q6L8G8 165 aa5.33□□□□□ -1.56
ATXN3-201ENST00000340660 SSBP3-AS1Q7Z2R9 100 aa5.33□□□□□ -1.56
ATXN3-201ENST00000340660 SVIPQ8NHG7 77 aa5.33□□□□□ -1.56
ATXN3-201ENST00000340660 ZFP30Q9Y2G7 519 aa5.33□□□□□ -1.56
ATXN3-201ENST00000340660 NEDD8Q15843 81 aa5.32□□□□□ -1.56
ATXN3-201ENST00000340660 PAPPA-AS1Q5QFB9 102 aa5.32□□□□□ -1.56
ATXN3-201ENST00000340660 ZNF706Q9Y5V0 76 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-201ENST00000340660 SDHAF1A6NFY7 115 aa5.31□□□□□ -1.56
ATXN3-201ENST00000340660 M0R378 163 aa5.31□□□□□ -1.56
ATXN3-201ENST00000340660 PEX7O00628 323 aa5.31□□□□□ -1.56
ATXN3-201ENST00000340660 NOL3O60936 208 aaKnown RBP5.31□□□□□ -1.56
ATXN3-201ENST00000340660 HMCN1Q96RW7 5635 aa5.31□□□□□ -1.56
ATXN3-201ENST00000340660 A0A1W2PPV4 95 aa5.3□□□□□ -1.56
ATXN3-201ENST00000340660 PVALBP20472 110 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-201ENST00000340660 GCHFRP30047 84 aa5.3□□□□□ -1.56
ATXN3-201ENST00000340660 KIAA1644Q3SXP7 199 aa5.3□□□□□ -1.56
ATXN3-201ENST00000340660 Q6ZUT4 128 aa5.3□□□□□ -1.56
ATXN3-201ENST00000340660 LINC01551Q86U37 167 aa5.3□□□□□ -1.56
ATXN3-201ENST00000340660 TMEM242Q9NWH2 141 aa5.3□□□□□ -1.56
ATXN3-201ENST00000340660 SPRR5A0A1B0GTR4 108 aa5.29□□□□□ -1.56
ATXN3-201ENST00000340660 DEFA1P59665 94 aa5.29□□□□□ -1.56
ATXN3-201ENST00000340660 LINC00483Q53H64 154 aa5.29□□□□□ -1.56
ATXN3-201ENST00000340660 LCE3CQ5T5A8 94 aa5.29□□□□□ -1.56
ATXN3-201ENST00000340660 FAM231DQ6ZW35 169 aa5.29□□□□□ -1.56
ATXN3-201ENST00000340660 RNASE7Q9H1E1 156 aaKnown RBP5.29□□□□□ -1.56
ATXN3-201ENST00000340660 I3L3M4 83 aa5.28□□□□□ -1.56
ATXN3-201ENST00000340660 LTAP01374 205 aa5.28□□□□□ -1.56
ATXN3-201ENST00000340660 STAG3L2P0CL84 134 aa5.28□□□□□ -1.56
ATXN3-201ENST00000340660 STAG3L3P0CL85 134 aa5.28□□□□□ -1.56
ATXN3-201ENST00000340660 MZT2BQ6NZ67 158 aa5.28□□□□□ -1.56
ATXN3-201ENST00000340660 PMCHP20382 165 aa5.27□□□□□ -1.57
ATXN3-201ENST00000340660 VBP1P61758 197 aa5.27□□□□□ -1.57
ATXN3-201ENST00000340660 CSDC2Q9Y534 153 aaKnown RBP5.27□□□□□ -1.57
ATXN3-201ENST00000340660 C7orf77A4D0Y5 90 aa5.26□□□□□ -1.57
ATXN3-201ENST00000340660 NKAPP1Q8N9T2 125 aa5.26□□□□□ -1.57
ATXN3-201ENST00000340660 TPPP3Q9BW30 176 aa5.26□□□□□ -1.57
ATXN3-201ENST00000340660 TRBV20-1A0A075B6N2 111 aa5.25□□□□□ -1.57
ATXN3-201ENST00000340660 FAUP35544 74 aaKnown RBP5.25□□□□□ -1.57
ATXN3-201ENST00000340660 C6orf99Q4VX62 202 aa5.25□□□□□ -1.57
ATXN3-201ENST00000340660 FMC1Q96HJ9 113 aa5.25□□□□□ -1.57
ATXN3-201ENST00000340660 A0A1W2PRE2 83 aa5.24□□□□□ -1.57
ATXN3-201ENST00000340660 FAM25EA8MYX2 175 aa5.24□□□□□ -1.57
ATXN3-201ENST00000340660 IGLC6P0CF74 106 aa5.24□□□□□ -1.57
ATXN3-201ENST00000340660 TRGC1P0CF51 173 aa5.23□□□□□ -1.57
ATXN3-201ENST00000340660 CDC34P49427 236 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-201ENST00000340660 UBE2G1P62253 170 aa5.23□□□□□ -1.57
ATXN3-201ENST00000340660 HIST1H2BAQ96A08 127 aa5.23□□□□□ -1.57
ATXN3-201ENST00000340660 TIMM17AQ99595 171 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms