RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 TMEM223A0PJW6 202 aa6.65□□□□□ -1.35
C11orf54-201ENST00000331239 PAX4O43316 350 aa6.65□□□□□ -1.35
C11orf54-201ENST00000331239 ZNF22P17026 224 aaPredicted RBP6.65□□□□□ -1.35
C11orf54-201ENST00000331239 MRPL23Q16540 153 aaKnown RBP6.65□□□□□ -1.35
C11orf54-201ENST00000331239 GAGE13Q4V321 117 aa6.65□□□□□ -1.35
C11orf54-201ENST00000331239 DEFB131BA0A096LNP1 70 aa6.64□□□□□ -1.35
C11orf54-201ENST00000331239 LEPROTO15243 131 aa6.64□□□□□ -1.35
C11orf54-201ENST00000331239 APOMO95445 188 aa6.64□□□□□ -1.35
C11orf54-201ENST00000331239 IGHV3-30P01768 117 aa6.64□□□□□ -1.35
C11orf54-201ENST00000331239 IGHV3-30-5P0DP03 117 aa6.64□□□□□ -1.35
C11orf54-201ENST00000331239 GTSF1LQ9H1H1 148 aa6.64□□□□□ -1.35
C11orf54-201ENST00000331239 DNAH9Q9NYC9 4486 aa6.64□□□□□ -1.35
C11orf54-201ENST00000331239 NUPR2A6NF83 97 aa6.64□□□□□ -1.35
C11orf54-201ENST00000331239 F5H768 121 aa6.64□□□□□ -1.35
C11orf54-201ENST00000331239 UBE2D3P61077 147 aa6.64□□□□□ -1.35
C11orf54-201ENST00000331239 UBE2D2P62837 147 aa6.64□□□□□ -1.35
C11orf54-201ENST00000331239 LYRM7Q5U5X0 104 aa6.64□□□□□ -1.35
C11orf54-201ENST00000331239 PRO0461Q9UI25 63 aa6.64□□□□□ -1.35
C11orf54-201ENST00000331239 PYGO1Q9Y3Y4 419 aa6.64□□□□□ -1.35
C11orf54-201ENST00000331239 A0A0J9YXV3 536 aa6.63□□□□□ -1.35
C11orf54-201ENST00000331239 NANOS2P60321 138 aaKnown RBP6.63□□□□□ -1.35
C11orf54-201ENST00000331239 Q6ZTC4 211 aa6.63□□□□□ -1.35
C11orf54-201ENST00000331239 KLK5Q9Y337 293 aaPredicted RBP6.63□□□□□ -1.35
C11orf54-201ENST00000331239 ICOSQ9Y6W8 199 aa6.63□□□□□ -1.35
C11orf54-201ENST00000331239 J3QR89 54 aa6.62□□□□□ -1.35
C11orf54-201ENST00000331239 GAGE5Q13069 117 aa6.62□□□□□ -1.35
C11orf54-201ENST00000331239 GAGE6Q13070 117 aa6.62□□□□□ -1.35
C11orf54-201ENST00000331239 Q6ZSN1 163 aa6.62□□□□□ -1.35
C11orf54-201ENST00000331239 CSDC2Q9Y534 153 aaKnown RBP6.62□□□□□ -1.35
C11orf54-201ENST00000331239 LOC107984156A0A0G2JMH3 177 aa6.62□□□□□ -1.35
C11orf54-201ENST00000331239 H7C423 109 aa6.62□□□□□ -1.35
C11orf54-201ENST00000331239 ETDBQ3ZM63 59 aa6.62□□□□□ -1.35
C11orf54-201ENST00000331239 ARL17AQ8IVW1 177 aa6.62□□□□□ -1.35
C11orf54-201ENST00000331239 VSIG2Q96IQ7 327 aa6.62□□□□□ -1.35
C11orf54-201ENST00000331239 IGHV3-64A0A075B6Q5 118 aa6.61□□□□□ -1.35
C11orf54-201ENST00000331239 J3QL48 77 aa6.61□□□□□ -1.35
C11orf54-201ENST00000331239 HUWE1Q7Z6Z7 4374 aaKnown RBP6.61□□□□□ -1.35
C11orf54-201ENST00000331239 CEMP1Q6PRD7 247 aaPredicted RBP6.61□□□□□ -1.35
C11orf54-201ENST00000331239 SFTA2Q6UW10 78 aa6.61□□□□□ -1.35
C11orf54-201ENST00000331239 C10orf126Q8N4M7 172 aa6.61□□□□□ -1.35
C11orf54-201ENST00000331239 CFC1BP0CG36 223 aa6.6□□□□□ -1.35
C11orf54-201ENST00000331239 CFC1P0CG37 223 aa6.6□□□□□ -1.35
C11orf54-201ENST00000331239 GYPEP15421 78 aa6.6□□□□□ -1.35
C11orf54-201ENST00000331239 MRPS36P82909 103 aaKnown RBP6.6□□□□□ -1.35
C11orf54-201ENST00000331239 WWC2-AS2Q96NR7 200 aa6.6□□□□□ -1.35
C11orf54-201ENST00000331239 SPANXA1Q9NS26 97 aa6.6□□□□□ -1.35
C11orf54-201ENST00000331239 ATP6V0E2Q8NHE4 81 aa6.6□□□□□ -1.35
C11orf54-201ENST00000331239 FAM104AQ969W3 186 aa6.6□□□□□ -1.35
C11orf54-201ENST00000331239 TIMM21Q9BVV7 248 aa6.6□□□□□ -1.35
C11orf54-201ENST00000331239 TENM3Q9P273 2699 aa6.6□□□□□ -1.35
C11orf54-201ENST00000331239 PSMB2P49721 201 aa6.59□□□□□ -1.35
C11orf54-201ENST00000331239 CHCHD7Q9BUK0 85 aa6.59□□□□□ -1.35
C11orf54-201ENST00000331239 PRO1854Q9UHT4 67 aa6.59□□□□□ -1.35
C11orf54-201ENST00000331239 PRKDCP78527 4128 aaKnown RBP6.59□□□□□ -1.35
C11orf54-201ENST00000331239 IGHV3-30-3P0DP02 117 aa6.59□□□□□ -1.35
C11orf54-201ENST00000331239 Q9UF83 564 aa6.59□□□□□ -1.35
C11orf54-201ENST00000331239 RNASE13Q5GAN3 156 aaKnown RBP6.58□□□□□ -1.36
C11orf54-201ENST00000331239 PPDPFQ9H3Y8 114 aa6.58□□□□□ -1.36
C11orf54-201ENST00000331239 ERG28Q9UKR5 140 aa6.58□□□□□ -1.36
C11orf54-201ENST00000331239 UBE2D4Q9Y2X8 147 aa6.58□□□□□ -1.36
C11orf54-201ENST00000331239 TRBV20-1A0A075B6N2 111 aa6.58□□□□□ -1.36
C11orf54-201ENST00000331239 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.58□□□□□ -1.36
C11orf54-201ENST00000331239 A0A0J9YXY3 114 aa6.58□□□□□ -1.36
C11orf54-201ENST00000331239 IGKV2-29A2NJV5 120 aaPredicted RBP6.58□□□□□ -1.36
C11orf54-201ENST00000331239 C3orf84H3BNL1 204 aa6.58□□□□□ -1.36
C11orf54-201ENST00000331239 Q6ZUT4 128 aa6.58□□□□□ -1.36
C11orf54-201ENST00000331239 A0A096LPF7 62 aa6.57□□□□□ -1.36
C11orf54-201ENST00000331239 A0A0B4J2C4 111 aa6.57□□□□□ -1.36
C11orf54-201ENST00000331239 TINCRA0A1B0GVN0 87 aa6.57□□□□□ -1.36
C11orf54-201ENST00000331239 GAGE12JA6NER3 117 aa6.57□□□□□ -1.36
C11orf54-201ENST00000331239 HTN3P15516 51 aa6.57□□□□□ -1.36
C11orf54-201ENST00000331239 SMCPP49901 116 aaPredicted RBP6.57□□□□□ -1.36
C11orf54-201ENST00000331239 GAGE4Q13068 117 aa6.57□□□□□ -1.36
C11orf54-201ENST00000331239 IGHV1-58A0A0C4DH39 117 aa6.57□□□□□ -1.36
C11orf54-201ENST00000331239 TCL1BO95988 128 aa6.57□□□□□ -1.36
C11orf54-201ENST00000331239 LELP1Q5T871 98 aa6.57□□□□□ -1.36
C11orf54-201ENST00000331239 TRAV8-3A0A0A6YYJ7 113 aa6.56□□□□□ -1.36
C11orf54-201ENST00000331239 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.56□□□□□ -1.36
C11orf54-201ENST00000331239 IGHV3-38A0A0C4DH36 116 aa6.56□□□□□ -1.36
C11orf54-201ENST00000331239 MUSTN1Q8IVN3 82 aa6.56□□□□□ -1.36
C11orf54-201ENST00000331239 MUC7Q8TAX7 377 aa6.56□□□□□ -1.36
C11orf54-201ENST00000331239 TRBV6-8A0A0A6YYG3 113 aa6.56□□□□□ -1.36
C11orf54-201ENST00000331239 GAGE12HA6NDE8 117 aa6.56□□□□□ -1.36
C11orf54-201ENST00000331239 EIF4EBP3O60516 100 aaPredicted RBP6.56□□□□□ -1.36
C11orf54-201ENST00000331239 IGHV3-33P01772 117 aa6.56□□□□□ -1.36
C11orf54-201ENST00000331239 LINC00528Q8N1L1 170 aa6.56□□□□□ -1.36
C11orf54-201ENST00000331239 NDUFA12Q9UI09 145 aa6.56□□□□□ -1.36
C11orf54-201ENST00000331239 COL7A1Q02388 2944 aa6.56□□□□□ -1.36
C11orf54-201ENST00000331239 SCGB1C2P0DMR2 95 aa6.55□□□□□ -1.36
C11orf54-201ENST00000331239 UPK3BQ9BT76 320 aa6.55□□□□□ -1.36
C11orf54-201ENST00000331239 STAB2Q8WWQ8 2551 aa6.55□□□□□ -1.36
C11orf54-201ENST00000331239 B5MCH6 92 aa6.55□□□□□ -1.36
C11orf54-201ENST00000331239 SPINK8P0C7L1 97 aa6.55□□□□□ -1.36
C11orf54-201ENST00000331239 SEC61GP60059 68 aa6.55□□□□□ -1.36
C11orf54-201ENST00000331239 FOXI1Q12951 378 aa6.55□□□□□ -1.36
C11orf54-201ENST00000331239 LYPD5Q6UWN5 251 aa6.55□□□□□ -1.36
C11orf54-201ENST00000331239 LITAFQ99732 161 aa6.55□□□□□ -1.36
C11orf54-201ENST00000331239 TMEM243Q9BU79 118 aa6.55□□□□□ -1.36
C11orf54-201ENST00000331239 APLNQ9ULZ1 77 aa6.54□□□□□ -1.36
C11orf54-201ENST00000331239 LOC100131303A0A0U1RQF7 123 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms