RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 MIAQ16674 131 aa4.18□□□□□ -1.74
SMG1-201ENST00000330588 Q6ZSA8 131 aa4.18□□□□□ -1.74
SMG1-201ENST00000330588 STPG4Q8N801 248 aa4.18□□□□□ -1.74
SMG1-201ENST00000330588 YPEL4Q96NS1 127 aa4.18□□□□□ -1.74
SMG1-201ENST00000330588 PRR34Q9NV39 138 aa4.18□□□□□ -1.74
SMG1-201ENST00000330588 DNAH10Q8IVF4 4471 aa4.17□□□□□ -1.74
SMG1-201ENST00000330588 IGHV1-24A0A0C4DH33 117 aa4.17□□□□□ -1.74
SMG1-201ENST00000330588 A8MWL6 223 aa4.17□□□□□ -1.74
SMG1-201ENST00000330588 NTF3P20783 257 aa4.17□□□□□ -1.74
SMG1-201ENST00000330588 RASL11AQ6T310 242 aa4.17□□□□□ -1.74
SMG1-201ENST00000330588 LYZL1Q6UWQ5 148 aa4.17□□□□□ -1.74
SMG1-201ENST00000330588 GFRA4Q9GZZ7 299 aa4.17□□□□□ -1.74
SMG1-201ENST00000330588 KLK12Q9UKR0 248 aa4.17□□□□□ -1.74
SMG1-201ENST00000330588 FAT2Q9NYQ8 4349 aa4.16□□□□□ -1.74
SMG1-201ENST00000330588 EPM2AB3EWF7 344 aa4.16□□□□□ -1.74
SMG1-201ENST00000330588 H7C423 109 aa4.16□□□□□ -1.74
SMG1-201ENST00000330588 HIST1H2BKO60814 126 aa4.16□□□□□ -1.74
SMG1-201ENST00000330588 NCR2O95944 276 aa4.16□□□□□ -1.74
SMG1-201ENST00000330588 CRPP02741 224 aa4.16□□□□□ -1.74
SMG1-201ENST00000330588 HIST1H2BJP06899 126 aa4.16□□□□□ -1.74
SMG1-201ENST00000330588 HIST1H2BOP23527 126 aa4.16□□□□□ -1.74
SMG1-201ENST00000330588 HIST1H2BBP33778 126 aa4.16□□□□□ -1.74
SMG1-201ENST00000330588 HIST1H2BDP58876 126 aa4.16□□□□□ -1.74
SMG1-201ENST00000330588 HIST1H2BCP62807 126 aa4.16□□□□□ -1.74
SMG1-201ENST00000330588 HIST2H2BEQ16778 126 aa4.16□□□□□ -1.74
SMG1-201ENST00000330588 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.16□□□□□ -1.74
SMG1-201ENST00000330588 NTM-AS1Q6ZSK4 140 aa4.16□□□□□ -1.74
SMG1-201ENST00000330588 HIST1H2BHQ93079 126 aa4.16□□□□□ -1.74
SMG1-201ENST00000330588 TMEM101Q96IK0 257 aa4.16□□□□□ -1.74
SMG1-201ENST00000330588 HIST1H2BNQ99877 126 aa4.16□□□□□ -1.74
SMG1-201ENST00000330588 HIST1H2BMQ99879 126 aa4.16□□□□□ -1.74
SMG1-201ENST00000330588 SMDT1Q9H4I9 107 aa4.16□□□□□ -1.74
SMG1-201ENST00000330588 CYSLTR1Q9Y271 337 aa4.16□□□□□ -1.74
SMG1-201ENST00000330588 IGKV2D-24A0A075B6R9 120 aa4.15□□□□□ -1.74
SMG1-201ENST00000330588 TRAV8-4A0A0B4J246 113 aa4.15□□□□□ -1.74
SMG1-201ENST00000330588 MGPP08493 103 aa4.15□□□□□ -1.74
SMG1-201ENST00000330588 MPV17L2Q567V2 206 aa4.15□□□□□ -1.74
SMG1-201ENST00000330588 C1orf195Q5TG92 126 aa4.15□□□□□ -1.74
SMG1-201ENST00000330588 ENHOQ6UWT2 76 aa4.15□□□□□ -1.74
SMG1-201ENST00000330588 TEX43Q6ZNM6 134 aa4.15□□□□□ -1.74
SMG1-201ENST00000330588 CHCHD5Q9BSY4 110 aa4.15□□□□□ -1.74
SMG1-201ENST00000330588 TMEM243Q9BU79 118 aa4.15□□□□□ -1.74
SMG1-201ENST00000330588 OSTCQ9NRP0 149 aa4.15□□□□□ -1.74
SMG1-201ENST00000330588 MUC21A0A0G2JKD1 596 aa4.14□□□□□ -1.75
SMG1-201ENST00000330588 TRBV6-5A0A0K0K1A5 114 aa4.14□□□□□ -1.75
SMG1-201ENST00000330588 MUC21A0A140T8X8 626 aa4.14□□□□□ -1.75
SMG1-201ENST00000330588 ANGP03950 147 aaKnown RBP4.14□□□□□ -1.75
SMG1-201ENST00000330588 UBE2WQ96B02 151 aa4.14□□□□□ -1.75
SMG1-201ENST00000330588 TMEM18Q96B42 140 aa4.14□□□□□ -1.75
SMG1-201ENST00000330588 RNASE7Q9H1E1 156 aaKnown RBP4.14□□□□□ -1.75
SMG1-201ENST00000330588 UQCR10Q9UDW1 63 aa4.14□□□□□ -1.75
SMG1-201ENST00000330588 DNAH17Q9UFH2 4485 aa4.14□□□□□ -1.75
SMG1-201ENST00000330588 C9JAW5 83 aa4.14□□□□□ -1.75
SMG1-201ENST00000330588 TMEM262E9PQX1 116 aa4.14□□□□□ -1.75
SMG1-201ENST00000330588 OXTP01178 125 aa4.14□□□□□ -1.75
SMG1-201ENST00000330588 WFDC2Q14508 124 aa4.14□□□□□ -1.75
SMG1-201ENST00000330588 TWIST1Q15672 202 aa4.14□□□□□ -1.75
SMG1-201ENST00000330588 Q5VSD8 79 aa4.14□□□□□ -1.75
SMG1-201ENST00000330588 KRTAP26-1Q6PEX3 210 aa4.14□□□□□ -1.75
SMG1-201ENST00000330588 TSKUQ8WUA8 353 aa4.14□□□□□ -1.75
SMG1-201ENST00000330588 GTSF1Q8WW33 167 aa4.14□□□□□ -1.75
SMG1-201ENST00000330588 BORCS7Q96B45 105 aa4.14□□□□□ -1.75
SMG1-201ENST00000330588 SMIM7Q9BQ49 75 aa4.14□□□□□ -1.75
SMG1-201ENST00000330588 EIF5A2Q9GZV4 153 aaKnown RBP4.14□□□□□ -1.75
SMG1-201ENST00000330588 PPP1R17O96001 155 aa4.13□□□□□ -1.75
SMG1-201ENST00000330588 SRP19P09132 144 aaKnown RBP4.13□□□□□ -1.75
SMG1-201ENST00000330588 PKD1P98161 4303 aa4.13□□□□□ -1.75
SMG1-201ENST00000330588 REG3AQ06141 175 aa4.13□□□□□ -1.75
SMG1-201ENST00000330588 BATFQ16520 125 aa4.13□□□□□ -1.75
SMG1-201ENST00000330588 TMEM191AQ9H0A3 160 aa4.13□□□□□ -1.75
SMG1-201ENST00000330588 DNAH2Q9P225 4427 aa4.13□□□□□ -1.75
SMG1-201ENST00000330588 A0A1B0GUT8 65 aa4.12□□□□□ -1.75
SMG1-201ENST00000330588 ZNF727A8MUV8 499 aa4.12□□□□□ -1.75
SMG1-201ENST00000330588 C10orf25Q5T742 122 aa4.12□□□□□ -1.75
SMG1-201ENST00000330588 C20orf203Q8NBC4 194 aa4.12□□□□□ -1.75
SMG1-201ENST00000330588 IMMP2LQ96T52 175 aa4.12□□□□□ -1.75
SMG1-201ENST00000330588 PKHD1P08F94 4074 aa4.12□□□□□ -1.75
SMG1-201ENST00000330588 C7orf77A4D0Y5 90 aa4.11□□□□□ -1.75
SMG1-201ENST00000330588 UBE2L6O14933 153 aa4.11□□□□□ -1.75
SMG1-201ENST00000330588 INAFM2P0DMQ5 153 aa4.11□□□□□ -1.75
SMG1-201ENST00000330588 FUSP35637 526 aaKnown RBP eCLIP4.11□□□□□ -1.75
SMG1-201ENST00000330588 RPS10P46783 165 aaKnown RBP4.11□□□□□ -1.75
SMG1-201ENST00000330588 CNBPP62633 177 aaKnown RBP4.11□□□□□ -1.75
SMG1-201ENST00000330588 MRPL54Q6P161 138 aaKnown RBP4.11□□□□□ -1.75
SMG1-201ENST00000330588 Q6Q795 121 aa4.11□□□□□ -1.75
SMG1-201ENST00000330588 LINC00269Q8N2A0 174 aa4.11□□□□□ -1.75
SMG1-201ENST00000330588 VAMP8Q9BV40 100 aa4.11□□□□□ -1.75
SMG1-201ENST00000330588 SPANXDQ9BXN6 97 aa4.11□□□□□ -1.75
SMG1-201ENST00000330588 RPS10P5Q9NQ39 176 aa4.11□□□□□ -1.75
SMG1-201ENST00000330588 TRBV27A0A0K0K1C4 114 aa4.1□□□□□ -1.75
SMG1-201ENST00000330588 SDHAF1A6NFY7 115 aa4.1□□□□□ -1.75
SMG1-201ENST00000330588 HIGD1CA8MV81 97 aa4.1□□□□□ -1.75
SMG1-201ENST00000330588 I3L3M4 83 aa4.1□□□□□ -1.75
SMG1-201ENST00000330588 TAX1BP3O14907 124 aa4.1□□□□□ -1.75
SMG1-201ENST00000330588 LECT2O14960 151 aa4.1□□□□□ -1.75
SMG1-201ENST00000330588 RIGQ13278 110 aa4.1□□□□□ -1.75
SMG1-201ENST00000330588 C9orf163Q8N9P6 203 aa4.1□□□□□ -1.75
SMG1-201ENST00000330588 PLEKHB2Q96CS7 222 aa4.1□□□□□ -1.75
SMG1-201ENST00000330588 CHAC1Q9BUX1 264 aa4.1□□□□□ -1.75
SMG1-201ENST00000330588 V9GYV3 84 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms