RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 UBE2D2P62837 147 aa8.74□□□□□ -1.01
AMBRA1-201ENST00000314845 CLUHP3Q96NS8 147 aa8.74□□□□□ -1.01
AMBRA1-201ENST00000314845 CENPFP49454 3210 aa8.74□□□□□ -1.01
AMBRA1-201ENST00000314845 IGLV1-51P01701 117 aa8.74□□□□□ -1.01
AMBRA1-201ENST00000314845 YPEL4Q96NS1 127 aa8.74□□□□□ -1.01
AMBRA1-201ENST00000314845 SMR3AQ99954 134 aa8.74□□□□□ -1.01
AMBRA1-201ENST00000314845 TP73-AS1Q9UF72 201 aa8.74□□□□□ -1.01
AMBRA1-201ENST00000314845 MUC7Q8TAX7 377 aa8.74□□□□□ -1.01
AMBRA1-201ENST00000314845 MTORP42345 2549 aa8.74□□□□□ -1.01
AMBRA1-201ENST00000314845 TRAV23DV6A0A075B6W5 121 aa8.73□□□□□ -1.01
AMBRA1-201ENST00000314845 M0R378 163 aa8.73□□□□□ -1.01
AMBRA1-201ENST00000314845 TRIAP1O43715 76 aa8.73□□□□□ -1.01
AMBRA1-201ENST00000314845 PRM2P04554 102 aa8.73□□□□□ -1.01
AMBRA1-201ENST00000314845 UQCRQO14949 82 aa8.72□□□□□ -1.01
AMBRA1-201ENST00000314845 NDUFV3P56181 108 aaKnown RBP8.72□□□□□ -1.01
AMBRA1-201ENST00000314845 MRPS12O15235 138 aaKnown RBP8.72□□□□□ -1.01
AMBRA1-201ENST00000314845 UPK3BQ9BT76 320 aa8.72□□□□□ -1.01
AMBRA1-201ENST00000314845 CHCHD7Q9BUK0 85 aa8.72□□□□□ -1.01
AMBRA1-201ENST00000314845 ATP5EP2Q5VTU8 51 aa8.72□□□□□ -1.01
AMBRA1-201ENST00000314845 A0A0J9YWU9 116 aa8.71□□□□□ -1.01
AMBRA1-201ENST00000314845 IGKV4-1P06312 121 aa8.71□□□□□ -1.01
AMBRA1-201ENST00000314845 LOC107984640A0A0U1RRK4 108 aa8.71□□□□□ -1.02
AMBRA1-201ENST00000314845 SLPIP03973 132 aa8.71□□□□□ -1.02
AMBRA1-201ENST00000314845 UBE2D1P51668 147 aa8.71□□□□□ -1.02
AMBRA1-201ENST00000314845 NANOS2P60321 138 aaKnown RBP8.71□□□□□ -1.02
AMBRA1-201ENST00000314845 A8MZ25 164 aa8.71□□□□□ -1.02
AMBRA1-201ENST00000314845 LINC00526Q96FQ7 95 aa8.71□□□□□ -1.02
AMBRA1-201ENST00000314845 CDC42SE2Q9NRR3 84 aa8.71□□□□□ -1.02
AMBRA1-201ENST00000314845 DHRS4-AS1Q9P1J3 65 aa8.71□□□□□ -1.02
AMBRA1-201ENST00000314845 TEX49A0A1B0GTD5 131 aa8.7□□□□□ -1.02
AMBRA1-201ENST00000314845 PRB2P02812 416 aaPredicted RBP8.7□□□□□ -1.02
AMBRA1-201ENST00000314845 M0R2N4 97 aa8.7□□□□□ -1.02
AMBRA1-201ENST00000314845 Q8IZM0 81 aa8.7□□□□□ -1.02
AMBRA1-201ENST00000314845 IGKV2-28A0A075B6P5 120 aa8.7□□□□□ -1.02
AMBRA1-201ENST00000314845 IGKV2D-28P01615 120 aa8.7□□□□□ -1.02
AMBRA1-201ENST00000314845 COX17Q14061 63 aa8.7□□□□□ -1.02
AMBRA1-201ENST00000314845 C16orf95Q9H693 158 aa8.7□□□□□ -1.02
AMBRA1-201ENST00000314845 ZNF706Q9Y5V0 76 aaPredicted RBP8.7□□□□□ -1.02
AMBRA1-201ENST00000314845 PTPRSQ13332 1948 aa8.69□□□□□ -1.02
AMBRA1-201ENST00000314845 CCKP06307 115 aa8.69□□□□□ -1.02
AMBRA1-201ENST00000314845 LY6G6CO95867 125 aa8.69□□□□□ -1.02
AMBRA1-201ENST00000314845 COL5A1P20908 1838 aaPredicted RBP8.69□□□□□ -1.02
AMBRA1-201ENST00000314845 Q6ZQY7 126 aa8.69□□□□□ -1.02
AMBRA1-201ENST00000314845 LINC00474Q9P2X8 69 aa8.68□□□□□ -1.02
AMBRA1-201ENST00000314845 C1orf158Q8N1D5 194 aa8.68□□□□□ -1.02
AMBRA1-201ENST00000314845 GAS8-AS1O95177 125 aa8.67□□□□□ -1.02
AMBRA1-201ENST00000314845 BRK1Q8WUW1 75 aa8.67□□□□□ -1.02
AMBRA1-201ENST00000314845 MT-ATP8P03928 68 aa8.66□□□□□ -1.02
AMBRA1-201ENST00000314845 EDN2P20800 178 aa8.66□□□□□ -1.02
AMBRA1-201ENST00000314845 CEP350Q5VT06 3117 aa8.66□□□□□ -1.02
AMBRA1-201ENST00000314845 NUPR2A6NF83 97 aa8.66□□□□□ -1.02
AMBRA1-201ENST00000314845 IGIPA6NJ69 53 aa8.66□□□□□ -1.02
AMBRA1-201ENST00000314845 SEC61GP60059 68 aa8.66□□□□□ -1.02
AMBRA1-201ENST00000314845 DNAH12Q6ZR08 3092 aa8.66□□□□□ -1.02
AMBRA1-201ENST00000314845 CYSRT1A8MQ03 144 aa8.65□□□□□ -1.02
AMBRA1-201ENST00000314845 LINC00242Q5T6M2 205 aa8.65□□□□□ -1.02
AMBRA1-201ENST00000314845 USP17L23D6RBM5 183 aa8.65□□□□□ -1.03
AMBRA1-201ENST00000314845 EGFEM1PQ0D2K5 195 aa8.64□□□□□ -1.03
AMBRA1-201ENST00000314845 ATG2AQ2TAZ0 1938 aa8.64□□□□□ -1.03
AMBRA1-201ENST00000314845 ZNF73O43830 326 aaPredicted RBP8.64□□□□□ -1.03
AMBRA1-201ENST00000314845 SDIM1Q6ZPB5 146 aa8.64□□□□□ -1.03
AMBRA1-201ENST00000314845 LST1O00453 97 aa8.64□□□□□ -1.03
AMBRA1-201ENST00000314845 CASC2Q6XLA1 102 aa8.64□□□□□ -1.03
AMBRA1-201ENST00000314845 COX8CQ7Z4L0 72 aa8.64□□□□□ -1.03
AMBRA1-201ENST00000314845 PPDPFQ9H3Y8 114 aa8.63□□□□□ -1.03
AMBRA1-201ENST00000314845 SCXQ7RTU7 201 aa8.63□□□□□ -1.03
AMBRA1-201ENST00000314845 C3orf22Q8N5N4 141 aa8.63□□□□□ -1.03
AMBRA1-201ENST00000314845 POM121L12Q8N7R1 296 aa8.63□□□□□ -1.03
AMBRA1-201ENST00000314845 POLQO75417 2590 aa8.63□□□□□ -1.03
AMBRA1-201ENST00000314845 SMIM11BQ8TCY0 68 aa8.63□□□□□ -1.03
AMBRA1-201ENST00000314845 C2orf91Q6ZV80 131 aa8.62□□□□□ -1.03
AMBRA1-201ENST00000314845 C20orf197Q8N268 126 aa8.62□□□□□ -1.03
AMBRA1-201ENST00000314845 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.62□□□□□ -1.03
AMBRA1-201ENST00000314845 MRPL55Q7Z7F7 128 aaKnown RBP8.62□□□□□ -1.03
AMBRA1-201ENST00000314845 ENHOQ6UWT2 76 aa8.62□□□□□ -1.03
AMBRA1-201ENST00000314845 FAM236DA0A1B0GTK5 79 aa8.62□□□□□ -1.03
AMBRA1-201ENST00000314845 FAM236CP0DP71 79 aa8.62□□□□□ -1.03
AMBRA1-201ENST00000314845 IMUPQ9GZP8 106 aa8.62□□□□□ -1.03
AMBRA1-201ENST00000314845 RETNQ9HD89 108 aa8.62□□□□□ -1.03
AMBRA1-201ENST00000314845 C3orf84H3BNL1 204 aa8.61□□□□□ -1.03
AMBRA1-201ENST00000314845 UNQ6190/PRO20217Q6UXQ8 127 aa8.61□□□□□ -1.03
AMBRA1-201ENST00000314845 FAM240AA0A1B0GVK7 77 aa8.6□□□□□ -1.03
AMBRA1-201ENST00000314845 RPL37AP8A6NKH3 93 aa8.6□□□□□ -1.03
AMBRA1-201ENST00000314845 FHL2Q14192 279 aa8.6□□□□□ -1.03
AMBRA1-201ENST00000314845 Q6ZTC4 211 aa8.6□□□□□ -1.03
AMBRA1-201ENST00000314845 CSDC2Q9Y534 153 aaKnown RBP8.6□□□□□ -1.03
AMBRA1-201ENST00000314845 PLAC8L1A1L4L8 177 aa8.6□□□□□ -1.03
AMBRA1-201ENST00000314845 BEAN1Q3B7T3 259 aa8.6□□□□□ -1.03
AMBRA1-201ENST00000314845 SVIPQ8NHG7 77 aa8.6□□□□□ -1.03
AMBRA1-201ENST00000314845 SMIM1B2RUZ4 78 aa8.6□□□□□ -1.03
AMBRA1-201ENST00000314845 SPINK6Q6UWN8 80 aa8.6□□□□□ -1.03
AMBRA1-201ENST00000314845 WFDC10BQ8IUB3 73 aa8.58□□□□□ -1.04
AMBRA1-201ENST00000314845 NDUFC2-KCTD14E9PQ53 114 aa8.58□□□□□ -1.04
AMBRA1-201ENST00000314845 V9GYY9 64 aa8.58□□□□□ -1.04
AMBRA1-201ENST00000314845 EPG5Q9HCE0 2579 aa8.57□□□□□ -1.04
AMBRA1-201ENST00000314845 RAI1Q7Z5J4 1906 aaPredicted RBP8.57□□□□□ -1.04
AMBRA1-201ENST00000314845 ATP5EP56381 51 aaPredicted RBP8.57□□□□□ -1.04
AMBRA1-201ENST00000314845 IGLV4-60A0A075B6I1 120 aa8.57□□□□□ -1.04
AMBRA1-201ENST00000314845 M0QXV9 152 aa8.56□□□□□ -1.04
AMBRA1-201ENST00000314845 RPL28P46779 137 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms