RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 HRCT1Q6UXD1 115 aa13.06□□□□□ -0.32
SPSB4-201ENST00000310546 PRIMA1Q86XR5 153 aa13.06□□□□□ -0.32
SPSB4-201ENST00000310546 CHCHD7Q9BUK0 85 aa13.06□□□□□ -0.32
SPSB4-201ENST00000310546 MOB4Q9Y3A3 225 aa13.06□□□□□ -0.32
SPSB4-201ENST00000310546 WIPF1O43516 503 aa13.06□□□□□ -0.32
SPSB4-201ENST00000310546 WNK1Q9H4A3 2382 aa13.06□□□□□ -0.32
SPSB4-201ENST00000310546 PIK3CD-AS1Q5SR53 167 aa13.06□□□□□ -0.32
SPSB4-201ENST00000310546 C9orf129Q5T035 196 aaKnown RBP13.06□□□□□ -0.32
SPSB4-201ENST00000310546 DGAT2L7PQ6IED9 249 aa13.06□□□□□ -0.32
SPSB4-201ENST00000310546 SERP2Q8N6R1 65 aa13.06□□□□□ -0.32
SPSB4-201ENST00000310546 PRM2P04554 102 aa13.05□□□□□ -0.32
SPSB4-201ENST00000310546 C19orf54Q5BKX5 351 aa13.05□□□□□ -0.32
SPSB4-201ENST00000310546 FAM222AQ5U5X8 452 aa13.04□□□□□ -0.32
SPSB4-201ENST00000310546 NIPBLQ6KC79 2804 aaeCLIP13.04□□□□□ -0.32
SPSB4-201ENST00000310546 SYNJ2BPP57105 145 aa13.03□□□□□ -0.32
SPSB4-201ENST00000310546 Q6ZSN1 163 aa13.03□□□□□ -0.32
SPSB4-201ENST00000310546 LINC00846Q9NV44 126 aa13.03□□□□□ -0.32
SPSB4-201ENST00000310546 USMG5Q96IX5 58 aa13.02□□□□□ -0.33
SPSB4-201ENST00000310546 HIST2H2BDQ6DRA6 164 aa13.02□□□□□ -0.33
SPSB4-201ENST00000310546 SNRPD3P62318 126 aaKnown RBP13.01□□□□□ -0.33
SPSB4-201ENST00000310546 COPS9Q8WXC6 57 aa13.01□□□□□ -0.33
SPSB4-201ENST00000310546 USP17L23D6RBM5 183 aa13.01□□□□□ -0.33
SPSB4-201ENST00000310546 F5H768 121 aa13.01□□□□□ -0.33
SPSB4-201ENST00000310546 UPK3BQ9BT76 320 aa13.01□□□□□ -0.33
SPSB4-201ENST00000310546 LINC01561Q8N1V8 128 aa13□□□□□ -0.33
SPSB4-201ENST00000310546 H3BUX3 64 aa13□□□□□ -0.33
SPSB4-201ENST00000310546 MSMBP08118 114 aa12.99□□□□□ -0.33
SPSB4-201ENST00000310546 BLCAPP62952 87 aa12.99□□□□□ -0.33
SPSB4-201ENST00000310546 IGHV3OR16-12A0A075B7B8 117 aa12.98□□□□□ -0.33
SPSB4-201ENST00000310546 A0A087WYN8 130 aa12.98□□□□□ -0.33
SPSB4-201ENST00000310546 PDZD2O15018 2839 aa12.98□□□□□ -0.33
SPSB4-201ENST00000310546 IGLV5-45A0A087WSX0 123 aa12.97□□□□□ -0.33
SPSB4-201ENST00000310546 LINC00242Q5T6M2 205 aa12.97□□□□□ -0.33
SPSB4-201ENST00000310546 IGLV5-39A0A0G2JS06 123 aa12.97□□□□□ -0.33
SPSB4-201ENST00000310546 Q5XG85 94 aa12.97□□□□□ -0.33
SPSB4-201ENST00000310546 JMJD1CQ15652 2540 aa12.97□□□□□ -0.33
SPSB4-201ENST00000310546 RBMY1A1P0DJD3 496 aaKnown RBP12.96□□□□□ -0.33
SPSB4-201ENST00000310546 RBMY1CP0DJD4 496 aa12.96□□□□□ -0.33
SPSB4-201ENST00000310546 RBMY1FQ15415 496 aaKnown RBP12.96□□□□□ -0.33
SPSB4-201ENST00000310546 SMIM1B2RUZ4 78 aa12.96□□□□□ -0.33
SPSB4-201ENST00000310546 CRPP02741 224 aa12.96□□□□□ -0.33
SPSB4-201ENST00000310546 Q6JHZ5 121 aa12.96□□□□□ -0.33
SPSB4-201ENST00000310546 NCR3O14931 201 aa12.95□□□□□ -0.34
SPSB4-201ENST00000310546 FHL2Q14192 279 aa12.94□□□□□ -0.34
SPSB4-201ENST00000310546 Q96MF0 132 aa12.94□□□□□ -0.34
SPSB4-201ENST00000310546 RPL28P46779 137 aaKnown RBP12.94□□□□□ -0.34
SPSB4-201ENST00000310546 LINC00337Q8N6G1 96 aa12.94□□□□□ -0.34
SPSB4-201ENST00000310546 TRAV13-2A0A0B4J235 113 aa12.93□□□□□ -0.34
SPSB4-201ENST00000310546 B4DSR2 109 aa12.93□□□□□ -0.34
SPSB4-201ENST00000310546 HILS1P60008 231 aa12.92□□□□□ -0.34
SPSB4-201ENST00000310546 ZNF415Q09FC8 603 aa12.92□□□□□ -0.34
SPSB4-201ENST00000310546 WFDC9Q8NEX5 89 aa12.92□□□□□ -0.34
SPSB4-201ENST00000310546 OTOGQ6ZRI0 2925 aa12.92□□□□□ -0.34
SPSB4-201ENST00000310546 IGHV4-59P01825 116 aa12.92□□□□□ -0.34
SPSB4-201ENST00000310546 C10orf99Q6UWK7 81 aa12.91□□□□□ -0.34
SPSB4-201ENST00000310546 WFDC11Q8NEX6 87 aa12.91□□□□□ -0.34
SPSB4-201ENST00000310546 K7EMT4 169 aa12.91□□□□□ -0.34
SPSB4-201ENST00000310546 SLPIP03973 132 aa12.91□□□□□ -0.34
SPSB4-201ENST00000310546 SMIM11BQ8TCY0 68 aa12.91□□□□□ -0.34
SPSB4-201ENST00000310546 LECT2O14960 151 aa12.9□□□□□ -0.34
SPSB4-201ENST00000310546 K7EQG2 157 aa12.9□□□□□ -0.34
SPSB4-201ENST00000310546 DEFB112Q30KQ8 113 aa12.9□□□□□ -0.34
SPSB4-201ENST00000310546 SND1-IT1Q9HBX3 110 aa12.89□□□□□ -0.35
SPSB4-201ENST00000310546 TRAV23DV6A0A075B6W5 121 aa12.89□□□□□ -0.35
SPSB4-201ENST00000310546 H3BUA1 57 aa12.89□□□□□ -0.35
SPSB4-201ENST00000310546 MIR7-3HGQ8N6C7 128 aa12.89□□□□□ -0.35
SPSB4-201ENST00000310546 IGKV2-28A0A075B6P5 120 aa12.88□□□□□ -0.35
SPSB4-201ENST00000310546 IGKV2D-28P01615 120 aa12.88□□□□□ -0.35
SPSB4-201ENST00000310546 GHRHP01286 108 aa12.88□□□□□ -0.35
SPSB4-201ENST00000310546 DEFB113Q30KQ7 82 aa12.88□□□□□ -0.35
SPSB4-201ENST00000310546 PF4P02776 101 aa12.87□□□□□ -0.35
SPSB4-201ENST00000310546 FN1P02751 2386 aaKnown RBP12.87□□□□□ -0.35
SPSB4-201ENST00000310546 OVOL2Q9BRP0 275 aa12.87□□□□□ -0.35
SPSB4-201ENST00000310546 HIVEP2P31629 2446 aa12.87□□□□□ -0.35
SPSB4-201ENST00000310546 IGLV1-40P01703 118 aa12.86□□□□□ -0.35
SPSB4-201ENST00000310546 TOMM7Q9P0U1 55 aa12.86□□□□□ -0.35
SPSB4-201ENST00000310546 C20orf197Q8N268 126 aa12.85□□□□□ -0.35
SPSB4-201ENST00000310546 LINC01356Q8N9X3 169 aa12.85□□□□□ -0.35
SPSB4-201ENST00000310546 AKAP9Q99996 3911 aa12.85□□□□□ -0.35
SPSB4-201ENST00000310546 IGHV3-53P01767 116 aa12.85□□□□□ -0.35
SPSB4-201ENST00000310546 RPL36AP83881 106 aaKnown RBP12.85□□□□□ -0.35
SPSB4-201ENST00000310546 RPL36ALQ969Q0 106 aaKnown RBP12.85□□□□□ -0.35
SPSB4-201ENST00000310546 TMEM243Q9BU79 118 aa12.85□□□□□ -0.35
SPSB4-201ENST00000310546 A0A096LNT2 108 aa12.84□□□□□ -0.35
SPSB4-201ENST00000310546 CFHR3Q02985 330 aa12.84□□□□□ -0.35
SPSB4-201ENST00000310546 OBSCN-AS1Q96MR7 158 aa12.84□□□□□ -0.35
SPSB4-201ENST00000310546 TEP1Q99973 2627 aaKnown RBP12.84□□□□□ -0.35
SPSB4-201ENST00000310546 LINC00158P58513 81 aa12.84□□□□□ -0.35
SPSB4-201ENST00000310546 CR1P17927 2039 aa12.83□□□□□ -0.36
SPSB4-201ENST00000310546 DSCR9P59020 149 aa12.83□□□□□ -0.36
SPSB4-201ENST00000310546 SETXQ7Z333 2677 aaKnown RBP12.83□□□□□ -0.36
SPSB4-201ENST00000310546 FAM19A1Q7Z5A9 133 aa12.82□□□□□ -0.36
SPSB4-201ENST00000310546 H0YGX0 51 aa12.82□□□□□ -0.36
SPSB4-201ENST00000310546 IGHV4-31P0DP07 118 aa12.82□□□□□ -0.36
SPSB4-201ENST00000310546 RBMY1BA6NDE4 496 aaKnown RBP12.82□□□□□ -0.36
SPSB4-201ENST00000310546 RBMY1EA6NEQ0 496 aaKnown RBP12.82□□□□□ -0.36
SPSB4-201ENST00000310546 RBMY1DP0C7P1 496 aaKnown RBP12.82□□□□□ -0.36
SPSB4-201ENST00000310546 PFN2P35080 140 aa12.81□□□□□ -0.36
SPSB4-201ENST00000310546 ENHOQ6UWT2 76 aa12.81□□□□□ -0.36
SPSB4-201ENST00000310546 C11orf44Q8N8P7 122 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms