RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 C2orf88Q9BSF0 95 aa11.76□□□□□ -0.53
TMEM88-201ENST00000301599 UQCR10Q9UDW1 63 aa11.76□□□□□ -0.53
TMEM88-201ENST00000301599 SDHAF1A6NFY7 115 aa11.75□□□□□ -0.53
TMEM88-201ENST00000301599 HSBP1L1C9JCN9 74 aa11.75□□□□□ -0.53
TMEM88-201ENST00000301599 CNBPP62633 177 aaKnown RBP11.75□□□□□ -0.53
TMEM88-201ENST00000301599 NXT2Q9NPJ8 142 aaKnown RBP11.75□□□□□ -0.53
TMEM88-201ENST00000301599 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.74□□□□□ -0.53
TMEM88-201ENST00000301599 KRTAP29-1A8MX34 341 aaPredicted RBP11.74□□□□□ -0.53
TMEM88-201ENST00000301599 I3L3M4 83 aa11.74□□□□□ -0.53
TMEM88-201ENST00000301599 CFAP161Q6P656 301 aa11.74□□□□□ -0.53
TMEM88-201ENST00000301599 MAP1LC3AQ9H492 121 aa11.74□□□□□ -0.53
TMEM88-201ENST00000301599 PAM16Q9Y3D7 125 aa11.74□□□□□ -0.53
TMEM88-201ENST00000301599 TRBV6-5A0A0K0K1A5 114 aa11.73□□□□□ -0.53
TMEM88-201ENST00000301599 SPATA45Q537H7 98 aa11.73□□□□□ -0.53
TMEM88-201ENST00000301599 IGKV3OR2-268A0A0C4DH90 116 aa11.72□□□□□ -0.53
TMEM88-201ENST00000301599 GAGE12HA6NDE8 117 aa11.72□□□□□ -0.53
TMEM88-201ENST00000301599 D6R8Y8 96 aa11.72□□□□□ -0.53
TMEM88-201ENST00000301599 SYS1-DBNDD2H3BUS1 97 aa11.72□□□□□ -0.53
TMEM88-201ENST00000301599 PPP1R17O96001 155 aa11.72□□□□□ -0.53
TMEM88-201ENST00000301599 KRTAP10-4P60372 401 aaPredicted RBP11.72□□□□□ -0.53
TMEM88-201ENST00000301599 MRPL51Q4U2R6 128 aaKnown RBP11.72□□□□□ -0.53
TMEM88-201ENST00000301599 URB1-AS1Q96HZ7 61 aa11.72□□□□□ -0.53
TMEM88-201ENST00000301599 ST20Q9HBF5 79 aa11.72□□□□□ -0.53
TMEM88-201ENST00000301599 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.71□□□□□ -0.53
TMEM88-201ENST00000301599 IGKV2-29A2NJV5 120 aaPredicted RBP11.71□□□□□ -0.53
TMEM88-201ENST00000301599 FGF6P10767 208 aa11.71□□□□□ -0.53
TMEM88-201ENST00000301599 AMN1Q8IY45 258 aa11.71□□□□□ -0.53
TMEM88-201ENST00000301599 DPH3Q96FX2 82 aa11.71□□□□□ -0.53
TMEM88-201ENST00000301599 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.71□□□□□ -0.53
TMEM88-201ENST00000301599 IGHV3-64A0A075B6Q5 118 aa11.7□□□□□ -0.54
TMEM88-201ENST00000301599 SLPIP03973 132 aa11.7□□□□□ -0.54
TMEM88-201ENST00000301599 MRAP2Q96G30 205 aa11.7□□□□□ -0.54
TMEM88-201ENST00000301599 LINC01546A6NGU7 62 aa11.69□□□□□ -0.54
TMEM88-201ENST00000301599 PRSS47A8MTI9 375 aa11.69□□□□□ -0.54
TMEM88-201ENST00000301599 K7EMI3 77 aa11.69□□□□□ -0.54
TMEM88-201ENST00000301599 HBDP02042 147 aa11.69□□□□□ -0.54
TMEM88-201ENST00000301599 ZNF25P17030 456 aaPredicted RBP11.69□□□□□ -0.54
TMEM88-201ENST00000301599 RPL37AP61513 92 aaKnown RBP11.69□□□□□ -0.54
TMEM88-201ENST00000301599 CHCHD10Q8WYQ3 142 aaPredicted RBP11.69□□□□□ -0.54
TMEM88-201ENST00000301599 TMEM101Q96IK0 257 aa11.69□□□□□ -0.54
TMEM88-201ENST00000301599 PMCHL2Q9BQD1 86 aa11.68□□□□□ -0.54
TMEM88-201ENST00000301599 LINC01549A6NIU2 74 aa11.67□□□□□ -0.54
TMEM88-201ENST00000301599 PANO1I0J062 215 aa11.67□□□□□ -0.54
TMEM88-201ENST00000301599 GAS8-AS1O95177 125 aa11.67□□□□□ -0.54
TMEM88-201ENST00000301599 IGLC3P0DOY3 106 aa11.67□□□□□ -0.54
TMEM88-201ENST00000301599 G0S2P27469 103 aa11.67□□□□□ -0.54
TMEM88-201ENST00000301599 POLR2KP53803 58 aaKnown RBP11.67□□□□□ -0.54
TMEM88-201ENST00000301599 C15orf56Q8N910 161 aa11.67□□□□□ -0.54
TMEM88-201ENST00000301599 OR5A1Q8NGJ0 315 aa11.67□□□□□ -0.54
TMEM88-201ENST00000301599 RNF185Q96GF1 192 aa11.67□□□□□ -0.54
TMEM88-201ENST00000301599 OXTP01178 125 aa11.66□□□□□ -0.54
TMEM88-201ENST00000301599 TSHBP01222 138 aa11.66□□□□□ -0.54
TMEM88-201ENST00000301599 IFI27P40305 119 aaPredicted RBP11.66□□□□□ -0.54
TMEM88-201ENST00000301599 HNRNPA3P51991 378 aaKnown RBP11.66□□□□□ -0.54
TMEM88-201ENST00000301599 CIRBPQ14011 172 aaKnown RBP11.66□□□□□ -0.54
TMEM88-201ENST00000301599 LINC01545Q5VT33 79 aa11.66□□□□□ -0.54
TMEM88-201ENST00000301599 TRBV27A0A0K0K1C4 114 aa11.65□□□□□ -0.54
TMEM88-201ENST00000301599 VCYO14598 125 aa11.64□□□□□ -0.55
TMEM88-201ENST00000301599 TNFRSF6BO95407 300 aa11.64□□□□□ -0.55
TMEM88-201ENST00000301599 Q8N8P6 123 aa11.64□□□□□ -0.55
TMEM88-201ENST00000301599 LINC00959A0A1B0GUT2 108 aa11.63□□□□□ -0.55
TMEM88-201ENST00000301599 FCER1GP30273 86 aa11.63□□□□□ -0.55
TMEM88-201ENST00000301599 HIGD2BQ4VC39 106 aa11.63□□□□□ -0.55
TMEM88-201ENST00000301599 Q6ZN92 141 aa11.63□□□□□ -0.55
TMEM88-201ENST00000301599 C20orf78Q9BR46 151 aa11.63□□□□□ -0.55
TMEM88-201ENST00000301599 LOC389332A0A1B0GUA5 103 aa11.62□□□□□ -0.55
TMEM88-201ENST00000301599 ATP5LO75964 103 aa11.62□□□□□ -0.55
TMEM88-201ENST00000301599 NPYP01303 97 aa11.62□□□□□ -0.55
TMEM88-201ENST00000301599 FOXI1Q12951 378 aa11.62□□□□□ -0.55
TMEM88-201ENST00000301599 SS18Q15532 418 aa11.62□□□□□ -0.55
TMEM88-201ENST00000301599 CDC42SE2Q9NRR3 84 aa11.62□□□□□ -0.55
TMEM88-201ENST00000301599 A0A087WYN8 130 aa11.61□□□□□ -0.55
TMEM88-201ENST00000301599 GVQW2A0A096LPI5 108 aaPredicted RBP11.61□□□□□ -0.55
TMEM88-201ENST00000301599 XCL1P47992 114 aa11.61□□□□□ -0.55
TMEM88-201ENST00000301599 COL5A1-AS1Q5SY13 56 aa11.61□□□□□ -0.55
TMEM88-201ENST00000301599 IFI27L1Q96BM0 104 aa11.61□□□□□ -0.55
TMEM88-201ENST00000301599 SNHG12Q9BXW3 62 aa11.61□□□□□ -0.55
TMEM88-201ENST00000301599 SMKR1H3BMG3 65 aa11.6□□□□□ -0.55
TMEM88-201ENST00000301599 CCL25O15444 150 aa11.6□□□□□ -0.55
TMEM88-201ENST00000301599 CHTF8P0CG12 524 aa11.6□□□□□ -0.55
TMEM88-201ENST00000301599 COX6A2Q02221 97 aa11.6□□□□□ -0.55
TMEM88-201ENST00000301599 SMAGPQ0VAQ4 97 aa11.6□□□□□ -0.55
TMEM88-201ENST00000301599 SPACA4Q8TDM5 124 aa11.6□□□□□ -0.55
TMEM88-201ENST00000301599 SUMO2P61956 95 aaKnown RBP11.59□□□□□ -0.55
TMEM88-201ENST00000301599 ORMDL2Q53FV1 153 aa11.59□□□□□ -0.55
TMEM88-201ENST00000301599 SLC25A34Q6PIV7 304 aa11.59□□□□□ -0.55
TMEM88-201ENST00000301599 IGHV1-58A0A0C4DH39 117 aa11.58□□□□□ -0.56
TMEM88-201ENST00000301599 CD164L2Q6UWJ8 174 aa11.58□□□□□ -0.56
TMEM88-201ENST00000301599 NRACQ8N912 160 aa11.58□□□□□ -0.56
TMEM88-201ENST00000301599 KIR2DL4Q99706 377 aa11.58□□□□□ -0.56
TMEM88-201ENST00000301599 PLAC8Q9NZF1 115 aa11.58□□□□□ -0.56
TMEM88-201ENST00000301599 RPL32P62910 135 aaKnown RBP11.57□□□□□ -0.56
TMEM88-201ENST00000301599 CSDC2Q9Y534 153 aaKnown RBP11.57□□□□□ -0.56
TMEM88-201ENST00000301599 LRP1Q07954 4544 aaKnown RBP11.57□□□□□ -0.56
TMEM88-201ENST00000301599 TCAPO15273 167 aa11.56□□□□□ -0.56
TMEM88-201ENST00000301599 ATOH7Q8N100 152 aa11.56□□□□□ -0.56
TMEM88-201ENST00000301599 MAJINQ3KP22 176 aa11.55□□□□□ -0.56
TMEM88-201ENST00000301599 SERTAD4-AS1Q5TG53 156 aa11.55□□□□□ -0.56
TMEM88-201ENST00000301599 PKIGQ9Y2B9 76 aa11.55□□□□□ -0.56
TMEM88-201ENST00000301599 A0A096LNJ9 63 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms