RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 Q8N814 137 aa10.88□□□□□ -0.67
SCN3B-201ENST00000299333 UBE2D3P61077 147 aa10.88□□□□□ -0.67
SCN3B-201ENST00000299333 IGIPA6NJ69 53 aa10.87□□□□□ -0.67
SCN3B-201ENST00000299333 COX17Q14061 63 aa10.87□□□□□ -0.67
SCN3B-201ENST00000299333 LINC00482Q8N8I6 264 aa10.87□□□□□ -0.67
SCN3B-201ENST00000299333 ZNF106Q9H2Y7 1883 aaKnown RBP10.87□□□□□ -0.67
SCN3B-201ENST00000299333 EDN2P20800 178 aa10.86□□□□□ -0.67
SCN3B-201ENST00000299333 C8orf87E5RJ46 101 aa10.86□□□□□ -0.67
SCN3B-201ENST00000299333 DAZAP2Q15038 168 aaPredicted RBP10.86□□□□□ -0.67
SCN3B-201ENST00000299333 ZNF843Q8N446 348 aa10.86□□□□□ -0.67
SCN3B-201ENST00000299333 PLXNB1O43157 2135 aa10.86□□□□□ -0.67
SCN3B-201ENST00000299333 LMO4P61968 165 aa10.86□□□□□ -0.67
SCN3B-201ENST00000299333 CDIP1Q9H305 208 aa10.86□□□□□ -0.67
SCN3B-201ENST00000299333 IGLV4-69A0A075B6H9 119 aa10.85□□□□□ -0.67
SCN3B-201ENST00000299333 TSPEAR-AS2P59090 65 aa10.85□□□□□ -0.67
SCN3B-201ENST00000299333 C10orf99Q6UWK7 81 aa10.85□□□□□ -0.67
SCN3B-201ENST00000299333 ZNF706Q9Y5V0 76 aaPredicted RBP10.85□□□□□ -0.67
SCN3B-201ENST00000299333 NCOA6Q14686 2063 aaPredicted RBP10.84□□□□□ -0.67
SCN3B-201ENST00000299333 LINC01547P58512 204 aaPredicted RBP10.84□□□□□ -0.67
SCN3B-201ENST00000299333 HILS1P60008 231 aa10.84□□□□□ -0.67
SCN3B-201ENST00000299333 SPINK1P00995 79 aa10.84□□□□□ -0.67
SCN3B-201ENST00000299333 RPL28P46779 137 aaKnown RBP10.84□□□□□ -0.67
SCN3B-201ENST00000299333 Q8IZM0 81 aa10.84□□□□□ -0.67
SCN3B-201ENST00000299333 CDC42SE2Q9NRR3 84 aa10.84□□□□□ -0.67
SCN3B-201ENST00000299333 Q9UF83 564 aa10.83□□□□□ -0.68
SCN3B-201ENST00000299333 KLLNB2CW77 178 aa10.83□□□□□ -0.68
SCN3B-201ENST00000299333 C1orf137Q5JT78 98 aa10.83□□□□□ -0.68
SCN3B-201ENST00000299333 LINC00242Q5T6M2 205 aa10.82□□□□□ -0.68
SCN3B-201ENST00000299333 PRR3P79522 188 aaKnown RBP10.82□□□□□ -0.68
SCN3B-201ENST00000299333 CYSRT1A8MQ03 144 aa10.82□□□□□ -0.68
SCN3B-201ENST00000299333 ADAMTSL4-AS1Q5T5F5 129 aa10.82□□□□□ -0.68
SCN3B-201ENST00000299333 F8WDY8 70 aa10.81□□□□□ -0.68
SCN3B-201ENST00000299333 CD164Q04900 197 aa10.81□□□□□ -0.68
SCN3B-201ENST00000299333 C9orf116Q5BN46 136 aaPredicted RBP10.8□□□□□ -0.68
SCN3B-201ENST00000299333 Q6YL49 198 aa10.8□□□□□ -0.68
SCN3B-201ENST00000299333 NOTCH4Q99466 2003 aa10.8□□□□□ -0.68
SCN3B-201ENST00000299333 H0Y9P7 68 aa10.8□□□□□ -0.68
SCN3B-201ENST00000299333 CNFNQ9BYD5 112 aa10.8□□□□□ -0.68
SCN3B-201ENST00000299333 X6R8D5 127 aa10.8□□□□□ -0.68
SCN3B-201ENST00000299333 MED12LQ86YW9 2145 aa10.8□□□□□ -0.68
SCN3B-201ENST00000299333 C10orf25Q5T742 122 aa10.8□□□□□ -0.68
SCN3B-201ENST00000299333 TRBV10-3A0A0K0K1G6 114 aa10.8□□□□□ -0.68
SCN3B-201ENST00000299333 SMIM1B2RUZ4 78 aa10.8□□□□□ -0.68
SCN3B-201ENST00000299333 COX6A2Q02221 97 aa10.79□□□□□ -0.68
SCN3B-201ENST00000299333 LINC00575Q6W349 94 aa10.79□□□□□ -0.68
SCN3B-201ENST00000299333 C7orf33Q8WU49 177 aa10.79□□□□□ -0.68
SCN3B-201ENST00000299333 A0A1W2PNU3 283 aaPredicted RBP10.78□□□□□ -0.68
SCN3B-201ENST00000299333 UNQ6190/PRO20217Q6UXQ8 127 aa10.78□□□□□ -0.68
SCN3B-201ENST00000299333 ZNF580Q9UK33 172 aa10.78□□□□□ -0.68
SCN3B-201ENST00000299333 SORL1Q92673 2214 aa10.78□□□□□ -0.68
SCN3B-201ENST00000299333 LELP1Q5T871 98 aa10.78□□□□□ -0.68
SCN3B-201ENST00000299333 IL17DQ8TAD2 202 aa10.78□□□□□ -0.68
SCN3B-201ENST00000299333 LINC00846Q9NV44 126 aa10.78□□□□□ -0.68
SCN3B-201ENST00000299333 RETNLBQ9BQ08 111 aa10.77□□□□□ -0.68
SCN3B-201ENST00000299333 TANC2Q9HCD6 1990 aa10.77□□□□□ -0.69
SCN3B-201ENST00000299333 HCG22E2RYF7 251 aa10.77□□□□□ -0.69
SCN3B-201ENST00000299333 IGHV6-1A0A0B4J1U7 121 aa10.77□□□□□ -0.69
SCN3B-201ENST00000299333 PRR14LQ5THK1 2151 aa10.76□□□□□ -0.69
SCN3B-201ENST00000299333 FBXL19-AS1Q494R0 122 aa10.76□□□□□ -0.69
SCN3B-201ENST00000299333 KPRPQ5T749 579 aaPredicted RBP10.76□□□□□ -0.69
SCN3B-201ENST00000299333 IGLV2-18A0A075B6J9 118 aa10.75□□□□□ -0.69
SCN3B-201ENST00000299333 KIAA1549LQ6ZVL6 1849 aa10.75□□□□□ -0.69
SCN3B-201ENST00000299333 KIAA1549Q9HCM3 1950 aa10.75□□□□□ -0.69
SCN3B-201ENST00000299333 A0A1B0GU69 56 aa10.75□□□□□ -0.69
SCN3B-201ENST00000299333 hDV103S1A0JD37 113 aa10.75□□□□□ -0.69
SCN3B-201ENST00000299333 PCDH15Q96QU1 1955 aa10.75□□□□□ -0.69
SCN3B-201ENST00000299333 DEFB116Q30KQ4 102 aa10.74□□□□□ -0.69
SCN3B-201ENST00000299333 MUC7Q8TAX7 377 aa10.74□□□□□ -0.69
SCN3B-201ENST00000299333 PTPRQQ9UMZ3 2332 aa10.74□□□□□ -0.69
SCN3B-201ENST00000299333 PLA2G1BP04054 148 aaKnown RBP10.73□□□□□ -0.69
SCN3B-201ENST00000299333 ARHGAP32A7KAX9 2087 aa10.72□□□□□ -0.69
SCN3B-201ENST00000299333 CHCHD7Q9BUK0 85 aa10.72□□□□□ -0.69
SCN3B-201ENST00000299333 KIF26AQ9ULI4 1882 aaPredicted RBP10.72□□□□□ -0.69
SCN3B-201ENST00000299333 A0A096LNJ9 63 aa10.72□□□□□ -0.69
SCN3B-201ENST00000299333 Q8NA96 180 aa10.72□□□□□ -0.69
SCN3B-201ENST00000299333 ATP11AUNQ6ZP68 121 aa10.72□□□□□ -0.69
SCN3B-201ENST00000299333 C18orf65Q6ZTR6 163 aa10.71□□□□□ -0.69
SCN3B-201ENST00000299333 FSTL3O95633 263 aa10.71□□□□□ -0.7
SCN3B-201ENST00000299333 TMEM131Q92545 1883 aa10.71□□□□□ -0.7
SCN3B-201ENST00000299333 M0R2N4 97 aa10.7□□□□□ -0.7
SCN3B-201ENST00000299333 TRAV10A0A0B4J240 114 aa10.7□□□□□ -0.7
SCN3B-201ENST00000299333 C19orf84I3L1E1 186 aa10.69□□□□□ -0.7
SCN3B-201ENST00000299333 FAM208BQ5VWN6 2430 aa10.69□□□□□ -0.7
SCN3B-201ENST00000299333 A0A087WSZ3 146 aa10.69□□□□□ -0.7
SCN3B-201ENST00000299333 MRGPRG-AS1Q2M3A8 158 aa10.68□□□□□ -0.7
SCN3B-201ENST00000299333 ADAMTS9Q9P2N4 1935 aa10.68□□□□□ -0.7
SCN3B-201ENST00000299333 IGLV4-60A0A075B6I1 120 aa10.68□□□□□ -0.7
SCN3B-201ENST00000299333 REG3GQ6UW15 175 aa10.68□□□□□ -0.7
SCN3B-201ENST00000299333 PSMG3-AS1Q96PY0 264 aa10.68□□□□□ -0.7
SCN3B-201ENST00000299333 COL4A4P53420 1690 aaPredicted RBP10.68□□□□□ -0.7
SCN3B-201ENST00000299333 EGFEM1PQ0D2K5 195 aa10.68□□□□□ -0.7
SCN3B-201ENST00000299333 LINC01561Q8N1V8 128 aa10.68□□□□□ -0.7
SCN3B-201ENST00000299333 CIRBP-AS1Q8TBR5 109 aa10.67□□□□□ -0.7
SCN3B-201ENST00000299333 LTBP2Q14767 1821 aa10.67□□□□□ -0.7
SCN3B-201ENST00000299333 A8MTW9 85 aa10.67□□□□□ -0.7
SCN3B-201ENST00000299333 C1orf64Q8NEQ6 169 aa10.66□□□□□ -0.7
SCN3B-201ENST00000299333 AMELXQ99217 191 aa10.66□□□□□ -0.7
SCN3B-201ENST00000299333 ZNF702PQ9H963 129 aa10.66□□□□□ -0.7
SCN3B-201ENST00000299333 HCFC1P51610 2035 aa10.66□□□□□ -0.7
SCN3B-201ENST00000299333 C6orf223Q8N319 242 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms