RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 RBMY1BA6NDE4 496 aaKnown RBP8.21□□□□□ -1.1
TRUB1-201ENST00000298746 RBMY1EA6NEQ0 496 aaKnown RBP8.21□□□□□ -1.1
TRUB1-201ENST00000298746 RBMY1DP0C7P1 496 aaKnown RBP8.21□□□□□ -1.1
TRUB1-201ENST00000298746 TMEM243Q9BU79 118 aa8.21□□□□□ -1.1
TRUB1-201ENST00000298746 ANKRD17O75179 2603 aaKnown RBP8.21□□□□□ -1.1
TRUB1-201ENST00000298746 NRGNQ92686 78 aa8.2□□□□□ -1.1
TRUB1-201ENST00000298746 A0A087WYN8 130 aa8.2□□□□□ -1.1
TRUB1-201ENST00000298746 CSDC2Q9Y534 153 aaKnown RBP8.2□□□□□ -1.1
TRUB1-201ENST00000298746 Q6ZTI0 123 aa8.2□□□□□ -1.1
TRUB1-201ENST00000298746 SMIM11BQ8TCY0 68 aa8.2□□□□□ -1.1
TRUB1-201ENST00000298746 C6orf226Q5I0X4 101 aa8.19□□□□□ -1.1
TRUB1-201ENST00000298746 COX7B2Q8TF08 81 aa8.19□□□□□ -1.1
TRUB1-201ENST00000298746 OVOL2Q9BRP0 275 aa8.19□□□□□ -1.1
TRUB1-201ENST00000298746 LINC00337Q8N6G1 96 aa8.19□□□□□ -1.1
TRUB1-201ENST00000298746 NOP10Q9NPE3 64 aaKnown RBP8.19□□□□□ -1.1
TRUB1-201ENST00000298746 PKD1L2Q7Z442 2459 aa8.19□□□□□ -1.1
TRUB1-201ENST00000298746 CXCL5P42830 114 aa8.19□□□□□ -1.1
TRUB1-201ENST00000298746 RPL18AQ02543 176 aaKnown RBP8.19□□□□□ -1.1
TRUB1-201ENST00000298746 CRYBG3Q68DQ2 2970 aa8.19□□□□□ -1.1
TRUB1-201ENST00000298746 TRGV4A0A0C4DH28 118 aa8.18□□□□□ -1.1
TRUB1-201ENST00000298746 IGLV5-39A0A0G2JS06 123 aa8.18□□□□□ -1.1
TRUB1-201ENST00000298746 MAP6D1Q9H9H5 199 aa8.18□□□□□ -1.1
TRUB1-201ENST00000298746 K7EQD1 137 aa8.18□□□□□ -1.1
TRUB1-201ENST00000298746 DSCR8Q96T75 97 aa8.18□□□□□ -1.1
TRUB1-201ENST00000298746 LINC00846Q9NV44 126 aa8.17□□□□□ -1.1
TRUB1-201ENST00000298746 ZANQ9Y493 2812 aa8.17□□□□□ -1.1
TRUB1-201ENST00000298746 TMEM89A2RUT3 159 aa8.17□□□□□ -1.1
TRUB1-201ENST00000298746 MTORP42345 2549 aa8.17□□□□□ -1.1
TRUB1-201ENST00000298746 WFDC9Q8NEX5 89 aa8.17□□□□□ -1.1
TRUB1-201ENST00000298746 ITPR1Q14643 2758 aa8.17□□□□□ -1.1
TRUB1-201ENST00000298746 IGLV5-45A0A087WSX0 123 aa8.16□□□□□ -1.1
TRUB1-201ENST00000298746 USP17L23D6RBM5 183 aa8.16□□□□□ -1.1
TRUB1-201ENST00000298746 H0YGX0 51 aa8.16□□□□□ -1.1
TRUB1-201ENST00000298746 CDC42SE2Q9NRR3 84 aa8.16□□□□□ -1.1
TRUB1-201ENST00000298746 SMIM9A6NGZ8 99 aa8.16□□□□□ -1.1
TRUB1-201ENST00000298746 PF4P02776 101 aa8.16□□□□□ -1.1
TRUB1-201ENST00000298746 FAM222AQ5U5X8 452 aa8.16□□□□□ -1.1
TRUB1-201ENST00000298746 PIEZO1Q92508 2521 aa8.16□□□□□ -1.1
TRUB1-201ENST00000298746 CHD6Q8TD26 2715 aa8.16□□□□□ -1.1
TRUB1-201ENST00000298746 TRAV23DV6A0A075B6W5 121 aa8.16□□□□□ -1.1
TRUB1-201ENST00000298746 RPL28P46779 137 aaKnown RBP8.16□□□□□ -1.1
TRUB1-201ENST00000298746 C5orf47Q569G3 176 aa8.16□□□□□ -1.1
TRUB1-201ENST00000298746 KIR2DL5BQ8NHK3 375 aa8.16□□□□□ -1.1
TRUB1-201ENST00000298746 ZFHX3Q15911 3703 aa8.16□□□□□ -1.1
TRUB1-201ENST00000298746 C9orf129Q5T035 196 aaKnown RBP8.15□□□□□ -1.1
TRUB1-201ENST00000298746 CLPSL2Q6UWE3 100 aa8.15□□□□□ -1.1
TRUB1-201ENST00000298746 LRRC75A-AS1Q8N1F1 130 aa8.15□□□□□ -1.1
TRUB1-201ENST00000298746 RNF152Q8N8N0 203 aa8.15□□□□□ -1.1
TRUB1-201ENST00000298746 ORMDL1Q9P0S3 153 aa8.15□□□□□ -1.1
TRUB1-201ENST00000298746 SERP2Q8N6R1 65 aa8.15□□□□□ -1.1
TRUB1-201ENST00000298746 HIVEP2P31629 2446 aa8.15□□□□□ -1.11
TRUB1-201ENST00000298746 LOC100131303A0A0U1RQF7 123 aa8.15□□□□□ -1.11
TRUB1-201ENST00000298746 RPL35AP18077 110 aaKnown RBP8.15□□□□□ -1.11
TRUB1-201ENST00000298746 CCL18P55774 89 aa8.15□□□□□ -1.11
TRUB1-201ENST00000298746 NTM-AS1Q6ZSK4 140 aa8.15□□□□□ -1.11
TRUB1-201ENST00000298746 TMEM86BQ8N661 226 aa8.15□□□□□ -1.11
TRUB1-201ENST00000298746 Q96MF0 132 aa8.15□□□□□ -1.11
TRUB1-201ENST00000298746 C11orf72Q8NBR9 251 aa8.14□□□□□ -1.11
TRUB1-201ENST00000298746 XCL1P47992 114 aa8.13□□□□□ -1.11
TRUB1-201ENST00000298746 GHRHP01286 108 aa8.12□□□□□ -1.11
TRUB1-201ENST00000298746 CRYGAP11844 174 aa8.12□□□□□ -1.11
TRUB1-201ENST00000298746 NBL1P41271 181 aa8.12□□□□□ -1.11
TRUB1-201ENST00000298746 BEAN1Q3B7T3 259 aa8.12□□□□□ -1.11
TRUB1-201ENST00000298746 PRORYQ9H606 182 aa8.12□□□□□ -1.11
TRUB1-201ENST00000298746 TRBV10-1A0A0K0K1A3 114 aa8.12□□□□□ -1.11
TRUB1-201ENST00000298746 LINC01356Q8N9X3 169 aa8.12□□□□□ -1.11
TRUB1-201ENST00000298746 DOPEY1Q5JWR5 2465 aa8.11□□□□□ -1.11
TRUB1-201ENST00000298746 IGKV2-28A0A075B6P5 120 aa8.11□□□□□ -1.11
TRUB1-201ENST00000298746 IGKV2D-28P01615 120 aa8.11□□□□□ -1.11
TRUB1-201ENST00000298746 HILS1P60008 231 aa8.11□□□□□ -1.11
TRUB1-201ENST00000298746 F5H768 121 aa8.11□□□□□ -1.11
TRUB1-201ENST00000298746 DEFB130BP0DP73 79 aa8.11□□□□□ -1.11
TRUB1-201ENST00000298746 DEFB130AP0DP74 79 aa8.11□□□□□ -1.11
TRUB1-201ENST00000298746 C20orf197Q8N268 126 aa8.11□□□□□ -1.11
TRUB1-201ENST00000298746 Q6JHZ5 121 aa8.1□□□□□ -1.11
TRUB1-201ENST00000298746 ENHOQ6UWT2 76 aa8.1□□□□□ -1.11
TRUB1-201ENST00000298746 S100A7L2Q5SY68 101 aa8.1□□□□□ -1.11
TRUB1-201ENST00000298746 UBL5Q9BZL1 73 aa8.1□□□□□ -1.11
TRUB1-201ENST00000298746 CYSTM1Q9H1C7 97 aa8.1□□□□□ -1.11
TRUB1-201ENST00000298746 A0A096LPF7 62 aa8.1□□□□□ -1.11
TRUB1-201ENST00000298746 TMEM258P61165 79 aa8.1□□□□□ -1.11
TRUB1-201ENST00000298746 HAMPP81172 84 aa8.1□□□□□ -1.11
TRUB1-201ENST00000298746 DEFB114Q30KQ6 69 aa8.1□□□□□ -1.11
TRUB1-201ENST00000298746 LAMTOR3Q9UHA4 124 aa8.1□□□□□ -1.11
TRUB1-201ENST00000298746 FLNCQ14315 2725 aa8.1□□□□□ -1.11
TRUB1-201ENST00000298746 PRR3P79522 188 aaKnown RBP8.09□□□□□ -1.11
TRUB1-201ENST00000298746 IGLV4-60A0A075B6I1 120 aa8.09□□□□□ -1.11
TRUB1-201ENST00000298746 C2orf48Q96LS8 159 aa8.09□□□□□ -1.11
TRUB1-201ENST00000298746 C1orf158Q8N1D5 194 aa8.09□□□□□ -1.12
TRUB1-201ENST00000298746 C22orf24Q9Y442 160 aa8.09□□□□□ -1.12
TRUB1-201ENST00000298746 HRCT1Q6UXD1 115 aa8.08□□□□□ -1.12
TRUB1-201ENST00000298746 ZNF702PQ9H963 129 aa8.08□□□□□ -1.12
TRUB1-201ENST00000298746 ACANP16112 2415 aa8.08□□□□□ -1.12
TRUB1-201ENST00000298746 FAM19A1Q7Z5A9 133 aa8.07□□□□□ -1.12
TRUB1-201ENST00000298746 IBA57-AS1B1ANH7 110 aa8.07□□□□□ -1.12
TRUB1-201ENST00000298746 ODF3L2Q3SX64 289 aa8.07□□□□□ -1.12
TRUB1-201ENST00000298746 DPH3Q96FX2 82 aa8.07□□□□□ -1.12
TRUB1-201ENST00000298746 CELSR2Q9HCU4 2923 aa8.07□□□□□ -1.12
TRUB1-201ENST00000298746 LINC01561Q8N1V8 128 aa8.07□□□□□ -1.12
TRUB1-201ENST00000298746 PLA2G2AP14555 144 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms