RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 LOC100131303A0A0U1RQF7 123 aa12.32□□□□□ -0.44
CNTNAP3-201ENST00000297668 LINC00959A0A1B0GUT2 108 aa12.32□□□□□ -0.44
CNTNAP3-201ENST00000297668 LINC00526Q96FQ7 95 aa12.32□□□□□ -0.44
CNTNAP3-201ENST00000297668 PRM2P04554 102 aa12.32□□□□□ -0.44
CNTNAP3-201ENST00000297668 WFDC10AQ9H1F0 79 aa12.32□□□□□ -0.44
CNTNAP3-201ENST00000297668 TLN2Q9Y4G6 2542 aa12.32□□□□□ -0.44
CNTNAP3-201ENST00000297668 NUP210LQ5VU65 1888 aa12.31□□□□□ -0.44
CNTNAP3-201ENST00000297668 UBE2D1P51668 147 aa12.31□□□□□ -0.44
CNTNAP3-201ENST00000297668 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.31□□□□□ -0.44
CNTNAP3-201ENST00000297668 C18orf65Q6ZTR6 163 aa12.3□□□□□ -0.44
CNTNAP3-201ENST00000297668 IGKV2-28A0A075B6P5 120 aa12.3□□□□□ -0.44
CNTNAP3-201ENST00000297668 C3orf84H3BNL1 204 aa12.3□□□□□ -0.44
CNTNAP3-201ENST00000297668 IGKV2D-28P01615 120 aa12.3□□□□□ -0.44
CNTNAP3-201ENST00000297668 LINC00310P59036 64 aa12.3□□□□□ -0.44
CNTNAP3-201ENST00000297668 PRRC2AP48634 2157 aaKnown RBP12.29□□□□□ -0.44
CNTNAP3-201ENST00000297668 SMIM11BQ8TCY0 68 aa12.29□□□□□ -0.44
CNTNAP3-201ENST00000297668 PPDPFQ9H3Y8 114 aa12.29□□□□□ -0.44
CNTNAP3-201ENST00000297668 USP9XQ93008 2570 aaPredicted RBP12.29□□□□□ -0.44
CNTNAP3-201ENST00000297668 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.29□□□□□ -0.44
CNTNAP3-201ENST00000297668 LELP1Q5T871 98 aa12.29□□□□□ -0.44
CNTNAP3-201ENST00000297668 POM121L12Q8N7R1 296 aa12.29□□□□□ -0.44
CNTNAP3-201ENST00000297668 M0R378 163 aa12.28□□□□□ -0.44
CNTNAP3-201ENST00000297668 CASC2Q6XLA1 102 aa12.28□□□□□ -0.44
CNTNAP3-201ENST00000297668 WFDC10BQ8IUB3 73 aa12.28□□□□□ -0.44
CNTNAP3-201ENST00000297668 ZFYVE26Q68DK2 2539 aa12.28□□□□□ -0.44
CNTNAP3-201ENST00000297668 KPRPQ5T749 579 aaPredicted RBP12.28□□□□□ -0.44
CNTNAP3-201ENST00000297668 ABCA12Q86UK0 2595 aa12.28□□□□□ -0.44
CNTNAP3-201ENST00000297668 TRAV10A0A0B4J240 114 aa12.28□□□□□ -0.44
CNTNAP3-201ENST00000297668 LRCOL1A6NCL2 159 aa12.28□□□□□ -0.44
CNTNAP3-201ENST00000297668 IGIPA6NJ69 53 aa12.28□□□□□ -0.44
CNTNAP3-201ENST00000297668 WDR87Q6ZQQ6 2873 aa12.27□□□□□ -0.45
CNTNAP3-201ENST00000297668 MRGPRG-AS1Q2M3A8 158 aa12.27□□□□□ -0.45
CNTNAP3-201ENST00000297668 UBE2D3P61077 147 aa12.26□□□□□ -0.45
CNTNAP3-201ENST00000297668 UBE2D2P62837 147 aa12.26□□□□□ -0.45
CNTNAP3-201ENST00000297668 CDC42SE2Q9NRR3 84 aa12.26□□□□□ -0.45
CNTNAP3-201ENST00000297668 SETD2Q9BYW2 2564 aaPredicted RBP12.26□□□□□ -0.45
CNTNAP3-201ENST00000297668 URB1-AS1Q96HZ7 61 aa12.26□□□□□ -0.45
CNTNAP3-201ENST00000297668 IGLV4-69A0A075B6H9 119 aa12.25□□□□□ -0.45
CNTNAP3-201ENST00000297668 FAM19A3Q7Z5A8 133 aa12.25□□□□□ -0.45
CNTNAP3-201ENST00000297668 ZNF843Q8N446 348 aa12.25□□□□□ -0.45
CNTNAP3-201ENST00000297668 DHRS4-AS1Q9P1J3 65 aa12.25□□□□□ -0.45
CNTNAP3-201ENST00000297668 C10orf142B7Z368 130 aa12.24□□□□□ -0.45
CNTNAP3-201ENST00000297668 PRO0628Q9UI54 55 aa12.24□□□□□ -0.45
CNTNAP3-201ENST00000297668 Q8IZM0 81 aa12.23□□□□□ -0.45
CNTNAP3-201ENST00000297668 LY6G6DO95868 133 aa12.23□□□□□ -0.45
CNTNAP3-201ENST00000297668 COX17Q14061 63 aa12.23□□□□□ -0.45
CNTNAP3-201ENST00000297668 LINC00242Q5T6M2 205 aa12.22□□□□□ -0.45
CNTNAP3-201ENST00000297668 CDSNQ15517 529 aa12.22□□□□□ -0.45
CNTNAP3-201ENST00000297668 ZNF73O43830 326 aaPredicted RBP12.21□□□□□ -0.45
CNTNAP3-201ENST00000297668 SERP1Q9Y6X1 66 aa12.21□□□□□ -0.45
CNTNAP3-201ENST00000297668 AVPP01185 164 aa12.21□□□□□ -0.45
CNTNAP3-201ENST00000297668 PMAIP1Q13794 54 aa12.2□□□□□ -0.46
CNTNAP3-201ENST00000297668 MUC7Q8TAX7 377 aa12.2□□□□□ -0.46
CNTNAP3-201ENST00000297668 COL4A4P53420 1690 aaPredicted RBP12.2□□□□□ -0.46
CNTNAP3-201ENST00000297668 WFDC13Q8IUB5 93 aa12.2□□□□□ -0.46
CNTNAP3-201ENST00000297668 LOC107984640A0A0U1RRK4 108 aa12.2□□□□□ -0.46
CNTNAP3-201ENST00000297668 SNURFQ9Y675 71 aa12.2□□□□□ -0.46
CNTNAP3-201ENST00000297668 FN1P02751 2386 aaKnown RBP12.2□□□□□ -0.46
CNTNAP3-201ENST00000297668 ODF3L2Q3SX64 289 aa12.19□□□□□ -0.46
CNTNAP3-201ENST00000297668 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.19□□□□□ -0.46
CNTNAP3-201ENST00000297668 CYSRT1A8MQ03 144 aa12.18□□□□□ -0.46
CNTNAP3-201ENST00000297668 IGLV2-18A0A075B6J9 118 aa12.17□□□□□ -0.46
CNTNAP3-201ENST00000297668 EDN2P20800 178 aa12.17□□□□□ -0.46
CNTNAP3-201ENST00000297668 USP9YO00507 2555 aaPredicted RBP12.17□□□□□ -0.46
CNTNAP3-201ENST00000297668 RPL37AP8A6NKH3 93 aa12.16□□□□□ -0.46
CNTNAP3-201ENST00000297668 SPINK6Q6UWN8 80 aa12.16□□□□□ -0.46
CNTNAP3-201ENST00000297668 C7orf33Q8WU49 177 aa12.16□□□□□ -0.46
CNTNAP3-201ENST00000297668 SMIM1B2RUZ4 78 aa12.16□□□□□ -0.46
CNTNAP3-201ENST00000297668 ATG2AQ2TAZ0 1938 aa12.16□□□□□ -0.46
CNTNAP3-201ENST00000297668 MUC22E2RYF6 1773 aaPredicted RBP12.15□□□□□ -0.46
CNTNAP3-201ENST00000297668 Q6JHZ5 121 aa12.15□□□□□ -0.46
CNTNAP3-201ENST00000297668 NTM-AS1Q6ZSK4 140 aa12.15□□□□□ -0.46
CNTNAP3-201ENST00000297668 A0A0J9YWU9 116 aa12.15□□□□□ -0.46
CNTNAP3-201ENST00000297668 CEP192Q8TEP8 1941 aa12.14□□□□□ -0.47
CNTNAP3-201ENST00000297668 A6NED7 52 aa12.14□□□□□ -0.47
CNTNAP3-201ENST00000297668 UNQ6190/PRO20217Q6UXQ8 127 aa12.14□□□□□ -0.47
CNTNAP3-201ENST00000297668 CRIP2P52943 208 aaPredicted RBP12.13□□□□□ -0.47
CNTNAP3-201ENST00000297668 ZNF706Q9Y5V0 76 aaPredicted RBP12.13□□□□□ -0.47
CNTNAP3-201ENST00000297668 PKD1L2Q7Z442 2459 aa12.13□□□□□ -0.47
CNTNAP3-201ENST00000297668 PRR4Q16378 134 aa12.12□□□□□ -0.47
CNTNAP3-201ENST00000297668 COX8CQ7Z4L0 72 aa12.12□□□□□ -0.47
CNTNAP3-201ENST00000297668 CEP295Q9C0D2 2601 aa12.12□□□□□ -0.47
CNTNAP3-201ENST00000297668 CHCHD7Q9BUK0 85 aa12.12□□□□□ -0.47
CNTNAP3-201ENST00000297668 TSPEAR-AS2P59090 65 aa12.11□□□□□ -0.47
CNTNAP3-201ENST00000297668 IGHV4-30-4P0DP06 118 aa12.11□□□□□ -0.47
CNTNAP3-201ENST00000297668 EML5Q05BV3 1969 aa12.11□□□□□ -0.47
CNTNAP3-201ENST00000297668 RPL28P46779 137 aaKnown RBP12.1□□□□□ -0.47
CNTNAP3-201ENST00000297668 Q8N9L7 120 aa12.1□□□□□ -0.47
CNTNAP3-201ENST00000297668 NANOS2P60321 138 aaKnown RBP12.09□□□□□ -0.47
CNTNAP3-201ENST00000297668 EGFEM1PQ0D2K5 195 aa12.09□□□□□ -0.47
CNTNAP3-201ENST00000297668 A0A096LNJ9 63 aa12.09□□□□□ -0.47
CNTNAP3-201ENST00000297668 M0R2N4 97 aa12.09□□□□□ -0.47
CNTNAP3-201ENST00000297668 OXLD1Q5BKU9 147 aa12.09□□□□□ -0.47
CNTNAP3-201ENST00000297668 SRCAPQ6ZRS2 3230 aa12.09□□□□□ -0.47
CNTNAP3-201ENST00000297668 K7ERS5 55 aa12.09□□□□□ -0.47
CNTNAP3-201ENST00000297668 COX6A2Q02221 97 aa12.08□□□□□ -0.48
CNTNAP3-201ENST00000297668 IGLV4-60A0A075B6I1 120 aa12.08□□□□□ -0.48
CNTNAP3-201ENST00000297668 C9orf116Q5BN46 136 aaPredicted RBP12.08□□□□□ -0.48
CNTNAP3-201ENST00000297668 IGLV1-51P01701 117 aa12.07□□□□□ -0.48
CNTNAP3-201ENST00000297668 Q8N814 137 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms