RNA–Protein interactions for RNA: ENST00000289269.6

PCDHAC2-201, Transcript of protocadherin alpha subfamily C, 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHAC2, Length 5,963 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2-201ENST00000289269 LINC01006Q8NI28 216 aa13.35□□□□□ -0.27
PCDHAC2-201ENST00000289269 C11orf71Q6IPW1 123 aa13.34□□□□□ -0.27
PCDHAC2-201ENST00000289269 LINC00474Q9P2X8 69 aa13.34□□□□□ -0.27
PCDHAC2-201ENST00000289269 YPEL4Q96NS1 127 aa13.34□□□□□ -0.27
PCDHAC2-201ENST00000289269 KLLNB2CW77 178 aa13.33□□□□□ -0.27
PCDHAC2-201ENST00000289269 LINC00208Q96KT6 92 aa13.33□□□□□ -0.27
PCDHAC2-201ENST00000289269 NTM-AS1Q6ZSK4 140 aa13.33□□□□□ -0.28
PCDHAC2-201ENST00000289269 CDC42SE2Q9NRR3 84 aa13.32□□□□□ -0.28
PCDHAC2-201ENST00000289269 POLR2KP53803 58 aaKnown RBP13.32□□□□□ -0.28
PCDHAC2-201ENST00000289269 NCOA6Q14686 2063 aaPredicted RBP13.32□□□□□ -0.28
PCDHAC2-201ENST00000289269 IGHV6-1A0A0B4J1U7 121 aa13.32□□□□□ -0.28
PCDHAC2-201ENST00000289269 C9orf116Q5BN46 136 aaPredicted RBP13.32□□□□□ -0.28
PCDHAC2-201ENST00000289269 FSTL3O95633 263 aa13.31□□□□□ -0.28
PCDHAC2-201ENST00000289269 MRGPRG-AS1Q2M3A8 158 aa13.31□□□□□ -0.28
PCDHAC2-201ENST00000289269 TRBV7-6A0A0J9YX20 115 aa13.3□□□□□ -0.28
PCDHAC2-201ENST00000289269 UNQ6190/PRO20217Q6UXQ8 127 aa13.3□□□□□ -0.28
PCDHAC2-201ENST00000289269 A0A087WVE0 104 aa13.3□□□□□ -0.28
PCDHAC2-201ENST00000289269 SMIM26A0A096LP01 95 aa13.3□□□□□ -0.28
PCDHAC2-201ENST00000289269 C1orf137Q5JT78 98 aa13.29□□□□□ -0.28
PCDHAC2-201ENST00000289269 CRIP2P52943 208 aaPredicted RBP13.29□□□□□ -0.28
PCDHAC2-201ENST00000289269 REG3GQ6UW15 175 aa13.28□□□□□ -0.28
PCDHAC2-201ENST00000289269 PMAIP1Q13794 54 aa13.28□□□□□ -0.28
PCDHAC2-201ENST00000289269 TRBV10-3A0A0K0K1G6 114 aa13.28□□□□□ -0.28
PCDHAC2-201ENST00000289269 Q8N6K4 173 aa13.28□□□□□ -0.28
PCDHAC2-201ENST00000289269 A0A087WYN8 130 aa13.27□□□□□ -0.28
PCDHAC2-201ENST00000289269 PCOTHQ58A44 107 aa13.27□□□□□ -0.28
PCDHAC2-201ENST00000289269 ZNF843Q8N446 348 aa13.27□□□□□ -0.28
PCDHAC2-201ENST00000289269 Q8N814 137 aa13.27□□□□□ -0.28
PCDHAC2-201ENST00000289269 TRAV7A0A075B6U4 112 aa13.27□□□□□ -0.28
PCDHAC2-201ENST00000289269 SPINK1P00995 79 aa13.27□□□□□ -0.29
PCDHAC2-201ENST00000289269 EDN2P20800 178 aa13.27□□□□□ -0.29
PCDHAC2-201ENST00000289269 RPL28P46779 137 aaKnown RBP13.27□□□□□ -0.29
PCDHAC2-201ENST00000289269 PRR3P79522 188 aaKnown RBP13.27□□□□□ -0.29
PCDHAC2-201ENST00000289269 C6orf223Q8N319 242 aa13.26□□□□□ -0.29
PCDHAC2-201ENST00000289269 OXLD1Q5BKU9 147 aa13.26□□□□□ -0.29
PCDHAC2-201ENST00000289269 IGLV1-40P01703 118 aa13.25□□□□□ -0.29
PCDHAC2-201ENST00000289269 PRYO14603 147 aa13.25□□□□□ -0.29
PCDHAC2-201ENST00000289269 LINC00242Q5T6M2 205 aa13.25□□□□□ -0.29
PCDHAC2-201ENST00000289269 LINC01547P58512 204 aaPredicted RBP13.25□□□□□ -0.29
PCDHAC2-201ENST00000289269 COX6A2Q02221 97 aa13.25□□□□□ -0.29
PCDHAC2-201ENST00000289269 IGIPA6NJ69 53 aa13.23□□□□□ -0.29
PCDHAC2-201ENST00000289269 NUPR2A6NF83 97 aa13.23□□□□□ -0.29
PCDHAC2-201ENST00000289269 BEAN1Q3B7T3 259 aa13.22□□□□□ -0.29
PCDHAC2-201ENST00000289269 PSPHP1O15172 72 aa13.22□□□□□ -0.29
PCDHAC2-201ENST00000289269 MUC7Q8TAX7 377 aa13.21□□□□□ -0.29
PCDHAC2-201ENST00000289269 SMIM1B2RUZ4 78 aa13.21□□□□□ -0.29
PCDHAC2-201ENST00000289269 EGFEM1PQ0D2K5 195 aa13.2□□□□□ -0.3
PCDHAC2-201ENST00000289269 DEFB116Q30KQ4 102 aa13.2□□□□□ -0.3
PCDHAC2-201ENST00000289269 IGLV5-52A0A0A0MRZ9 124 aa13.19□□□□□ -0.3
PCDHAC2-201ENST00000289269 KIAA1549Q9HCM3 1950 aa13.19□□□□□ -0.3
PCDHAC2-201ENST00000289269 Q9BRP9 147 aa13.18□□□□□ -0.3
PCDHAC2-201ENST00000289269 IGLV4-60A0A075B6I1 120 aa13.18□□□□□ -0.3
PCDHAC2-201ENST00000289269 CHCHD7Q9BUK0 85 aa13.18□□□□□ -0.3
PCDHAC2-201ENST00000289269 SRCAPQ6ZRS2 3230 aa13.17□□□□□ -0.3
PCDHAC2-201ENST00000289269 ALPK3Q96L96 1907 aa13.17□□□□□ -0.3
PCDHAC2-201ENST00000289269 TRBV7-7A0A0K0K1E9 115 aa13.17□□□□□ -0.3
PCDHAC2-201ENST00000289269 TSPEAR-AS2P59090 65 aa13.17□□□□□ -0.3
PCDHAC2-201ENST00000289269 LINC01556Q5JQF7 62 aa13.17□□□□□ -0.3
PCDHAC2-201ENST00000289269 BRI3O95415 125 aa13.16□□□□□ -0.3
PCDHAC2-201ENST00000289269 LINC00575Q6W349 94 aa13.16□□□□□ -0.3
PCDHAC2-201ENST00000289269 HIVEP2P31629 2446 aa13.16□□□□□ -0.3
PCDHAC2-201ENST00000289269 Q8N3U1 123 aa13.16□□□□□ -0.3
PCDHAC2-201ENST00000289269 NUP210LQ5VU65 1888 aa13.15□□□□□ -0.3
PCDHAC2-201ENST00000289269 H0Y9P7 68 aa13.15□□□□□ -0.3
PCDHAC2-201ENST00000289269 KIAA1549LQ6ZVL6 1849 aa13.15□□□□□ -0.3
PCDHAC2-201ENST00000289269 ODF3L2Q3SX64 289 aa13.14□□□□□ -0.31
PCDHAC2-201ENST00000289269 SMR3AQ99954 134 aa13.14□□□□□ -0.31
PCDHAC2-201ENST00000289269 C2orf16Q68DN1 1984 aa13.14□□□□□ -0.31
PCDHAC2-201ENST00000289269 FAM208BQ5VWN6 2430 aa13.14□□□□□ -0.31
PCDHAC2-201ENST00000289269 CNFNQ9BYD5 112 aa13.13□□□□□ -0.31
PCDHAC2-201ENST00000289269 TANC2Q9HCD6 1990 aa13.13□□□□□ -0.31
PCDHAC2-201ENST00000289269 ADAMTSL4-AS1Q5T5F5 129 aa13.13□□□□□ -0.31
PCDHAC2-201ENST00000289269 A0A087WSZ3 146 aa13.13□□□□□ -0.31
PCDHAC2-201ENST00000289269 CRYGAP11844 174 aa13.13□□□□□ -0.31
PCDHAC2-201ENST00000289269 SBSPONQ8IVN8 264 aa13.12□□□□□ -0.31
PCDHAC2-201ENST00000289269 ZNF580Q9UK33 172 aa13.12□□□□□ -0.31
PCDHAC2-201ENST00000289269 MED12LQ86YW9 2145 aa13.12□□□□□ -0.31
PCDHAC2-201ENST00000289269 FREM1Q5H8C1 2179 aa13.11□□□□□ -0.31
PCDHAC2-201ENST00000289269 URB1-AS1Q96HZ7 61 aa13.11□□□□□ -0.31
PCDHAC2-201ENST00000289269 Q6ZTC4 211 aa13.1□□□□□ -0.31
PCDHAC2-201ENST00000289269 AVPP01185 164 aa13.1□□□□□ -0.31
PCDHAC2-201ENST00000289269 ZFHX2Q9C0A1 2572 aaPredicted RBP13.09□□□□□ -0.31
PCDHAC2-201ENST00000289269 FHL2Q14192 279 aa13.09□□□□□ -0.31
PCDHAC2-201ENST00000289269 PTPRQQ9UMZ3 2332 aa13.08□□□□□ -0.32
PCDHAC2-201ENST00000289269 LINC00310P59036 64 aa13.07□□□□□ -0.32
PCDHAC2-201ENST00000289269 HCG22E2RYF7 251 aa13.07□□□□□ -0.32
PCDHAC2-201ENST00000289269 WNK1Q9H4A3 2382 aa13.06□□□□□ -0.32
PCDHAC2-201ENST00000289269 A8MTW9 85 aa13.06□□□□□ -0.32
PCDHAC2-201ENST00000289269 CDSNQ15517 529 aa13.05□□□□□ -0.32
PCDHAC2-201ENST00000289269 PLA2G2AP14555 144 aa13.04□□□□□ -0.32
PCDHAC2-201ENST00000289269 Q6ZSN1 163 aa13.02□□□□□ -0.32
PCDHAC2-201ENST00000289269 Q9UF83 564 aa13.02□□□□□ -0.32
PCDHAC2-201ENST00000289269 PRR14LQ5THK1 2151 aa13.02□□□□□ -0.33
PCDHAC2-201ENST00000289269 DSCAMO60469 2012 aa13.02□□□□□ -0.33
PCDHAC2-201ENST00000289269 IGLV1-51P01701 117 aa13.01□□□□□ -0.33
PCDHAC2-201ENST00000289269 PRLHP81277 87 aa13.01□□□□□ -0.33
PCDHAC2-201ENST00000289269 TMEM254Q8TBM7 123 aa13.01□□□□□ -0.33
PCDHAC2-201ENST00000289269 AMELXQ99217 191 aa13.01□□□□□ -0.33
PCDHAC2-201ENST00000289269 C2orf48Q96LS8 159 aa13.01□□□□□ -0.33
PCDHAC2-201ENST00000289269 IGKV2D-30A0A075B6S6 120 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 337 ms