RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 GAGE12HA6NDE8 117 aa14.49□□□□□ -0.09
PDLIM3-203ENST00000284771 F8VRH5 84 aa14.49□□□□□ -0.09
PDLIM3-203ENST00000284771 IGLC3P0DOY3 106 aa14.49□□□□□ -0.09
PDLIM3-203ENST00000284771 FOXI1Q12951 378 aa14.49□□□□□ -0.09
PDLIM3-203ENST00000284771 CD164L2Q6UWJ8 174 aa14.49□□□□□ -0.09
PDLIM3-203ENST00000284771 PET117Q6UWS5 81 aa14.49□□□□□ -0.09
PDLIM3-203ENST00000284771 TINCRA0A1B0GVN0 87 aa14.49□□□□□ -0.09
PDLIM3-203ENST00000284771 LINC01545Q5VT33 79 aa14.49□□□□□ -0.09
PDLIM3-203ENST00000284771 C6orf223Q8N319 242 aa14.49□□□□□ -0.09
PDLIM3-203ENST00000284771 C11orf86A6NJI1 115 aa14.47□□□□□ -0.09
PDLIM3-203ENST00000284771 NFE4Q86UQ8 179 aa14.47□□□□□ -0.09
PDLIM3-203ENST00000284771 C1orf134Q5TEV5 83 aa14.46□□□□□ -0.09
PDLIM3-203ENST00000284771 CHAC1Q9BUX1 264 aa14.46□□□□□ -0.09
PDLIM3-203ENST00000284771 CDKN2A-AS1Q9UH64 79 aa14.46□□□□□ -0.09
PDLIM3-203ENST00000284771 HERVK_113P63121 156 aa14.46□□□□□ -0.1
PDLIM3-203ENST00000284771 C5orf38Q86SI9 138 aa14.46□□□□□ -0.1
PDLIM3-203ENST00000284771 RMI2Q96E14 147 aa14.46□□□□□ -0.1
PDLIM3-203ENST00000284771 IGLV5-45A0A087WSX0 123 aa14.45□□□□□ -0.1
PDLIM3-203ENST00000284771 SEC11AP67812 179 aa14.45□□□□□ -0.1
PDLIM3-203ENST00000284771 GEMIN7Q9H840 131 aaKnown RBP14.45□□□□□ -0.1
PDLIM3-203ENST00000284771 RYR3Q15413 4870 aa14.44□□□□□ -0.1
PDLIM3-203ENST00000284771 DNAH17Q9UFH2 4485 aa14.44□□□□□ -0.1
PDLIM3-203ENST00000284771 ZNF22P17026 224 aaPredicted RBP14.43□□□□□ -0.1
PDLIM3-203ENST00000284771 TM2D2Q9BX73 214 aa14.43□□□□□ -0.1
PDLIM3-203ENST00000284771 COX11Q9Y6N1 276 aa14.43□□□□□ -0.1
PDLIM3-203ENST00000284771 A0A087WZ39 114 aa14.42□□□□□ -0.1
PDLIM3-203ENST00000284771 RTL8CO15255 209 aa14.42□□□□□ -0.1
PDLIM3-203ENST00000284771 LINC00469Q8N7U9 141 aa14.42□□□□□ -0.1
PDLIM3-203ENST00000284771 DPM2O94777 84 aa14.41□□□□□ -0.1
PDLIM3-203ENST00000284771 FRAS1Q86XX4 4008 aa14.41□□□□□ -0.1
PDLIM3-203ENST00000284771 IGKCP01834 107 aa14.4□□□□□ -0.1
PDLIM3-203ENST00000284771 WFDC2Q14508 124 aa14.4□□□□□ -0.1
PDLIM3-203ENST00000284771 COX7A2LO14548 114 aa14.39□□□□□ -0.11
PDLIM3-203ENST00000284771 PSCAO43653 123 aa14.39□□□□□ -0.11
PDLIM3-203ENST00000284771 PLNP26678 52 aa14.39□□□□□ -0.11
PDLIM3-203ENST00000284771 TMEM170BQ5T4T1 132 aa14.39□□□□□ -0.11
PDLIM3-203ENST00000284771 LECT2O14960 151 aa14.38□□□□□ -0.11
PDLIM3-203ENST00000284771 ATOH7Q8N100 152 aa14.38□□□□□ -0.11
PDLIM3-203ENST00000284771 LOC105371267A0A1B0GV96 52 aa14.37□□□□□ -0.11
PDLIM3-203ENST00000284771 LRCOL1A6NCL2 159 aa14.37□□□□□ -0.11
PDLIM3-203ENST00000284771 SPINK8P0C7L1 97 aa14.36□□□□□ -0.11
PDLIM3-203ENST00000284771 C15orf56Q8N910 161 aa14.36□□□□□ -0.11
PDLIM3-203ENST00000284771 FAT2Q9NYQ8 4349 aa14.36□□□□□ -0.11
PDLIM3-203ENST00000284771 C20orf202A1L168 122 aa14.36□□□□□ -0.11
PDLIM3-203ENST00000284771 SMIM1B2RUZ4 78 aa14.36□□□□□ -0.11
PDLIM3-203ENST00000284771 SCGB1D1O95968 90 aa14.36□□□□□ -0.11
PDLIM3-203ENST00000284771 MALP21145 153 aa14.35□□□□□ -0.11
PDLIM3-203ENST00000284771 JOSD1Q15040 202 aaPredicted RBP14.35□□□□□ -0.11
PDLIM3-203ENST00000284771 TMEM223A0PJW6 202 aa14.34□□□□□ -0.11
PDLIM3-203ENST00000284771 USP17L23D6RBM5 183 aa14.34□□□□□ -0.11
PDLIM3-203ENST00000284771 AKR1D1P51857 326 aa14.34□□□□□ -0.11
PDLIM3-203ENST00000284771 PYY3Q5JQD4 70 aa14.34□□□□□ -0.11
PDLIM3-203ENST00000284771 TNP2Q05952 138 aa14.33□□□□□ -0.11
PDLIM3-203ENST00000284771 LINC01561Q8N1V8 128 aa14.33□□□□□ -0.11
PDLIM3-203ENST00000284771 STPG4Q8N801 248 aa14.33□□□□□ -0.11
PDLIM3-203ENST00000284771 IGHV3-64A0A075B6Q5 118 aa14.33□□□□□ -0.12
PDLIM3-203ENST00000284771 H3BRM9 83 aa14.33□□□□□ -0.12
PDLIM3-203ENST00000284771 MAJINQ3KP22 176 aa14.32□□□□□ -0.12
PDLIM3-203ENST00000284771 LINC00526Q96FQ7 95 aa14.32□□□□□ -0.12
PDLIM3-203ENST00000284771 IGLV5-39A0A0G2JS06 123 aa14.31□□□□□ -0.12
PDLIM3-203ENST00000284771 A0A087WTM6 91 aa14.3□□□□□ -0.12
PDLIM3-203ENST00000284771 IGHV1-58A0A0C4DH39 117 aa14.3□□□□□ -0.12
PDLIM3-203ENST00000284771 HIGD2BQ4VC39 106 aa14.3□□□□□ -0.12
PDLIM3-203ENST00000284771 KIAA0087Q14695 138 aa14.3□□□□□ -0.12
PDLIM3-203ENST00000284771 ORAOV1Q8WV07 137 aa14.3□□□□□ -0.12
PDLIM3-203ENST00000284771 hDV102S1A0JD36 115 aa14.29□□□□□ -0.12
PDLIM3-203ENST00000284771 APOMO95445 188 aa14.29□□□□□ -0.12
PDLIM3-203ENST00000284771 GVQW2A0A096LPI5 108 aaPredicted RBP14.28□□□□□ -0.12
PDLIM3-203ENST00000284771 CDPF1Q6NVV7 123 aa14.28□□□□□ -0.12
PDLIM3-203ENST00000284771 CFAP161Q6P656 301 aa14.27□□□□□ -0.12
PDLIM3-203ENST00000284771 SLPIP03973 132 aa14.26□□□□□ -0.13
PDLIM3-203ENST00000284771 TOMM7Q9P0U1 55 aa14.26□□□□□ -0.13
PDLIM3-203ENST00000284771 DNAH11Q96DT5 4516 aa14.25□□□□□ -0.13
PDLIM3-203ENST00000284771 SPAG11BQ08648 103 aa14.25□□□□□ -0.13
PDLIM3-203ENST00000284771 ANKRD39Q53RE8 183 aa14.25□□□□□ -0.13
PDLIM3-203ENST00000284771 IGKV2D-26A0A0A0MRZ7 120 aa14.24□□□□□ -0.13
PDLIM3-203ENST00000284771 TSPEAR-AS2P59090 65 aa14.24□□□□□ -0.13
PDLIM3-203ENST00000284771 Q8N814 137 aa14.24□□□□□ -0.13
PDLIM3-203ENST00000284771 E9PLD3 99 aa14.23□□□□□ -0.13
PDLIM3-203ENST00000284771 Q8IZM0 81 aa14.23□□□□□ -0.13
PDLIM3-203ENST00000284771 COX7B2Q8TF08 81 aa14.23□□□□□ -0.13
PDLIM3-203ENST00000284771 NTN5Q8WTR8 489 aaPredicted RBP14.23□□□□□ -0.13
PDLIM3-203ENST00000284771 ZNF561-AS1K7EIQ3 104 aa14.23□□□□□ -0.13
PDLIM3-203ENST00000284771 PKD1P98161 4303 aa14.22□□□□□ -0.13
PDLIM3-203ENST00000284771 C2orf82Q6UX34 121 aa14.22□□□□□ -0.13
PDLIM3-203ENST00000284771 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.21□□□□□ -0.13
PDLIM3-203ENST00000284771 HERVK_113P61574 105 aa14.21□□□□□ -0.13
PDLIM3-203ENST00000284771 C6orf226Q5I0X4 101 aa14.21□□□□□ -0.13
PDLIM3-203ENST00000284771 LEPROTO15243 131 aa14.2□□□□□ -0.14
PDLIM3-203ENST00000284771 FUSP35637 526 aaKnown RBP eCLIP14.2□□□□□ -0.14
PDLIM3-203ENST00000284771 C10orf25Q5T742 122 aa14.2□□□□□ -0.14
PDLIM3-203ENST00000284771 PRSS2P07478 247 aa14.19□□□□□ -0.14
PDLIM3-203ENST00000284771 C14orf177Q52M58 125 aa14.19□□□□□ -0.14
PDLIM3-203ENST00000284771 LINC00336Q6ZUF6 198 aa14.19□□□□□ -0.14
PDLIM3-203ENST00000284771 TTTY13Q9BZ97 58 aa14.19□□□□□ -0.14
PDLIM3-203ENST00000284771 J3QQQ9 107 aa14.18□□□□□ -0.14
PDLIM3-203ENST00000284771 UNQ6190/PRO20217Q6UXQ8 127 aa14.18□□□□□ -0.14
PDLIM3-203ENST00000284771 C2orf48Q96LS8 159 aa14.18□□□□□ -0.14
PDLIM3-203ENST00000284771 Q6ZRU5 148 aa14.17□□□□□ -0.14
PDLIM3-203ENST00000284771 PLEKHB2Q96CS7 222 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms