RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 HBDP02042 147 aa4.24□□□□□ -1.73
CD44-204ENST00000279452 SMR3BP02814 79 aaPredicted RBP4.24□□□□□ -1.73
CD44-204ENST00000279452 TRGC2P03986 189 aa4.24□□□□□ -1.73
CD44-204ENST00000279452 LINC00614P0C842 121 aa4.24□□□□□ -1.73
CD44-204ENST00000279452 ERASQ7Z444 233 aa4.24□□□□□ -1.73
CD44-204ENST00000279452 BAGE3Q86Y29 109 aa4.24□□□□□ -1.73
CD44-204ENST00000279452 ORAOV1Q8WV07 137 aa4.24□□□□□ -1.73
CD44-204ENST00000279452 FAM104AQ969W3 186 aa4.24□□□□□ -1.73
CD44-204ENST00000279452 CARD19Q96LW7 228 aa4.24□□□□□ -1.73
CD44-204ENST00000279452 PACRGQ96M98 296 aaPredicted RBP4.24□□□□□ -1.73
CD44-204ENST00000279452 YPEL4Q96NS1 127 aa4.24□□□□□ -1.73
CD44-204ENST00000279452 CAMK2N2Q96S95 79 aa4.24□□□□□ -1.73
CD44-204ENST00000279452 TIMM17AQ99595 171 aa4.24□□□□□ -1.73
CD44-204ENST00000279452 GEMIN7Q9H840 131 aaKnown RBP4.24□□□□□ -1.73
CD44-204ENST00000279452 FAM30AQ9NZY2 134 aa4.24□□□□□ -1.73
CD44-204ENST00000279452 DNAH17Q9UFH2 4485 aa4.24□□□□□ -1.73
CD44-204ENST00000279452 FAT2Q9NYQ8 4349 aa4.24□□□□□ -1.73
CD44-204ENST00000279452 IGLV4-69A0A075B6H9 119 aa4.23□□□□□ -1.73
CD44-204ENST00000279452 IGKV2-24A0A0C4DH68 120 aa4.23□□□□□ -1.73
CD44-204ENST00000279452 LINC01549A6NIU2 74 aa4.23□□□□□ -1.73
CD44-204ENST00000279452 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.23□□□□□ -1.73
CD44-204ENST00000279452 HSBP1O75506 76 aa4.23□□□□□ -1.73
CD44-204ENST00000279452 NPSP0C0P6 89 aa4.23□□□□□ -1.73
CD44-204ENST00000279452 UBE2D1P51668 147 aa4.23□□□□□ -1.73
CD44-204ENST00000279452 CNBPP62633 177 aaKnown RBP4.23□□□□□ -1.73
CD44-204ENST00000279452 LINC00242Q5T6M2 205 aa4.23□□□□□ -1.73
CD44-204ENST00000279452 LINC00173Q6ZV60 143 aa4.23□□□□□ -1.73
CD44-204ENST00000279452 C9orf163Q8N9P6 203 aa4.23□□□□□ -1.73
CD44-204ENST00000279452 TOMM7Q9P0U1 55 aa4.23□□□□□ -1.73
CD44-204ENST00000279452 FRAS1Q86XX4 4008 aa4.23□□□□□ -1.73
CD44-204ENST00000279452 BIRC6Q9NR09 4857 aa4.23□□□□□ -1.73
CD44-204ENST00000279452 IGHV3OR16-9A0A0B4J2B5 98 aa4.22□□□□□ -1.73
CD44-204ENST00000279452 LINC01546A6NGU7 62 aa4.22□□□□□ -1.73
CD44-204ENST00000279452 SLPIP03973 132 aa4.22□□□□□ -1.73
CD44-204ENST00000279452 PRSS2P07478 247 aa4.22□□□□□ -1.73
CD44-204ENST00000279452 XGP55808 180 aa4.22□□□□□ -1.73
CD44-204ENST00000279452 HERVK_113P63121 156 aa4.22□□□□□ -1.73
CD44-204ENST00000279452 SEC11AP67812 179 aa4.22□□□□□ -1.73
CD44-204ENST00000279452 COX6A2Q02221 97 aa4.22□□□□□ -1.73
CD44-204ENST00000279452 SYCNQ0VAF6 134 aa4.22□□□□□ -1.73
CD44-204ENST00000279452 SCXQ7RTU7 201 aa4.22□□□□□ -1.73
CD44-204ENST00000279452 LINC00469Q8N7U9 141 aa4.22□□□□□ -1.73
CD44-204ENST00000279452 OR10D4PQ8NGN7 298 aa4.22□□□□□ -1.73
CD44-204ENST00000279452 URB1-AS1Q96HZ7 61 aa4.22□□□□□ -1.73
CD44-204ENST00000279452 AMELXQ99217 191 aa4.22□□□□□ -1.73
CD44-204ENST00000279452 PKIGQ9Y2B9 76 aa4.22□□□□□ -1.73
CD44-204ENST00000279452 A0A0J9YXV3 536 aa4.21□□□□□ -1.74
CD44-204ENST00000279452 COLCA2A8K830 154 aa4.21□□□□□ -1.74
CD44-204ENST00000279452 EPM2AB3EWF7 344 aa4.21□□□□□ -1.74
CD44-204ENST00000279452 FAM229AH3BQW9 127 aa4.21□□□□□ -1.74
CD44-204ENST00000279452 ATP5LO75964 103 aa4.21□□□□□ -1.74
CD44-204ENST00000279452 CHTF8P0CG12 524 aa4.21□□□□□ -1.74
CD44-204ENST00000279452 RPL18AQ02543 176 aaKnown RBP4.21□□□□□ -1.74
CD44-204ENST00000279452 GAGE2BQ13066 116 aa4.21□□□□□ -1.74
CD44-204ENST00000279452 PMVKQ15126 192 aa4.21□□□□□ -1.74
CD44-204ENST00000279452 MAJINQ3KP22 176 aa4.21□□□□□ -1.74
CD44-204ENST00000279452 Q6ZRU5 148 aa4.21□□□□□ -1.74
CD44-204ENST00000279452 Q8N1X5 172 aa4.21□□□□□ -1.74
CD44-204ENST00000279452 CHCHD1Q96BP2 118 aaKnown RBP4.21□□□□□ -1.74
CD44-204ENST00000279452 CHAC1Q9BUX1 264 aa4.21□□□□□ -1.74
CD44-204ENST00000279452 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.21□□□□□ -1.74
CD44-204ENST00000279452 HECTD4Q9Y4D8 3996 aa4.21□□□□□ -1.74
CD44-204ENST00000279452 A0A087WZ39 114 aa4.2□□□□□ -1.74
CD44-204ENST00000279452 A0A096LNJ9 63 aa4.2□□□□□ -1.74
CD44-204ENST00000279452 H0Y8G0 127 aa4.2□□□□□ -1.74
CD44-204ENST00000279452 NDUFA1O15239 70 aa4.2□□□□□ -1.74
CD44-204ENST00000279452 CKS1BP61024 79 aa4.2□□□□□ -1.74
CD44-204ENST00000279452 Q5VSD8 79 aa4.2□□□□□ -1.74
CD44-204ENST00000279452 SDIM1Q6ZPB5 146 aa4.2□□□□□ -1.74
CD44-204ENST00000279452 Q6ZSA8 131 aa4.2□□□□□ -1.74
CD44-204ENST00000279452 FAM19A2Q8N3H0 131 aa4.2□□□□□ -1.74
CD44-204ENST00000279452 CIRBP-AS1Q8TBR5 109 aa4.2□□□□□ -1.74
CD44-204ENST00000279452 C2orf48Q96LS8 159 aa4.2□□□□□ -1.74
CD44-204ENST00000279452 CST9LQ9H4G1 147 aa4.2□□□□□ -1.74
CD44-204ENST00000279452 CDKN2A-AS1Q9UH64 79 aa4.2□□□□□ -1.74
CD44-204ENST00000279452 PKD1P98161 4303 aa4.19□□□□□ -1.74
CD44-204ENST00000279452 A0A096LNI7 61 aa4.19□□□□□ -1.74
CD44-204ENST00000279452 LOC107984640A0A0U1RRK4 108 aa4.19□□□□□ -1.74
CD44-204ENST00000279452 TINCRA0A1B0GVN0 87 aa4.19□□□□□ -1.74
CD44-204ENST00000279452 H3BRM9 83 aa4.19□□□□□ -1.74
CD44-204ENST00000279452 PANO1I0J062 215 aa4.19□□□□□ -1.74
CD44-204ENST00000279452 SERF1AO75920 110 aa4.19□□□□□ -1.74
CD44-204ENST00000279452 SPINK8P0C7L1 97 aa4.19□□□□□ -1.74
CD44-204ENST00000279452 PDZD11Q5EBL8 140 aa4.19□□□□□ -1.74
CD44-204ENST00000279452 C6orf226Q5I0X4 101 aa4.19□□□□□ -1.74
CD44-204ENST00000279452 C2orf82Q6UX34 121 aa4.19□□□□□ -1.74
CD44-204ENST00000279452 DNAH11Q96DT5 4516 aa4.18□□□□□ -1.74
CD44-204ENST00000279452 ATP6V1G1O75348 118 aa4.18□□□□□ -1.74
CD44-204ENST00000279452 FABP4P15090 132 aa4.18□□□□□ -1.74
CD44-204ENST00000279452 TMEM170BQ5T4T1 132 aa4.18□□□□□ -1.74
CD44-204ENST00000279452 UNQ6190/PRO20217Q6UXQ8 127 aa4.18□□□□□ -1.74
CD44-204ENST00000279452 STPG4Q8N801 248 aa4.18□□□□□ -1.74
CD44-204ENST00000279452 SPACA4Q8TDM5 124 aa4.18□□□□□ -1.74
CD44-204ENST00000279452 IFI27L1Q96BM0 104 aa4.18□□□□□ -1.74
CD44-204ENST00000279452 LINC00474Q9P2X8 69 aa4.18□□□□□ -1.74
CD44-204ENST00000279452 CHTOPQ9Y3Y2 248 aaKnown RBP4.18□□□□□ -1.74
CD44-204ENST00000279452 A0A087WYN8 130 aa4.17□□□□□ -1.74
CD44-204ENST00000279452 SMIM1B2RUZ4 78 aa4.17□□□□□ -1.74
CD44-204ENST00000279452 F8WDY8 70 aa4.17□□□□□ -1.74
CD44-204ENST00000279452 LEPROTL1O95214 131 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms