RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 ESRGQ1W209 222 aa12.31□□□□□ -0.44
TSPAN3-201ENST00000267970 ODF3Q96PU9 254 aa12.31□□□□□ -0.44
TSPAN3-201ENST00000267970 IGF2-ASQ6U949 168 aa12.31□□□□□ -0.44
TSPAN3-201ENST00000267970 ALPK3Q96L96 1907 aa12.3□□□□□ -0.44
TSPAN3-201ENST00000267970 IGLV4-69A0A075B6H9 119 aa12.3□□□□□ -0.44
TSPAN3-201ENST00000267970 PLAC8L1A1L4L8 177 aa12.3□□□□□ -0.44
TSPAN3-201ENST00000267970 COX6A2Q02221 97 aa12.3□□□□□ -0.44
TSPAN3-201ENST00000267970 ZNF580Q9UK33 172 aa12.3□□□□□ -0.44
TSPAN3-201ENST00000267970 TRBV7-6A0A0J9YX20 115 aa12.3□□□□□ -0.44
TSPAN3-201ENST00000267970 A0A087WYN8 130 aa12.29□□□□□ -0.44
TSPAN3-201ENST00000267970 LY6G6CO95867 125 aa12.29□□□□□ -0.44
TSPAN3-201ENST00000267970 ZNF843Q8N446 348 aa12.29□□□□□ -0.44
TSPAN3-201ENST00000267970 TRBV6-4A0A1B0GX49 114 aa12.28□□□□□ -0.44
TSPAN3-201ENST00000267970 M0R378 163 aa12.28□□□□□ -0.44
TSPAN3-201ENST00000267970 Q9UF83 564 aa12.28□□□□□ -0.44
TSPAN3-201ENST00000267970 KIR2DL5BQ8NHK3 375 aa12.27□□□□□ -0.44
TSPAN3-201ENST00000267970 IMUPQ9GZP8 106 aa12.27□□□□□ -0.44
TSPAN3-201ENST00000267970 CD164L2Q6UWJ8 174 aa12.27□□□□□ -0.44
TSPAN3-201ENST00000267970 ZNF73O43830 326 aaPredicted RBP12.27□□□□□ -0.45
TSPAN3-201ENST00000267970 PLA2G2AP14555 144 aa12.27□□□□□ -0.45
TSPAN3-201ENST00000267970 CRYGAP11844 174 aa12.26□□□□□ -0.45
TSPAN3-201ENST00000267970 CIRBP-AS1Q8TBR5 109 aa12.26□□□□□ -0.45
TSPAN3-201ENST00000267970 UNQ6190/PRO20217Q6UXQ8 127 aa12.26□□□□□ -0.45
TSPAN3-201ENST00000267970 CYSRT1A8MQ03 144 aa12.25□□□□□ -0.45
TSPAN3-201ENST00000267970 C7orf33Q8WU49 177 aa12.25□□□□□ -0.45
TSPAN3-201ENST00000267970 ZNF702PQ9H963 129 aa12.25□□□□□ -0.45
TSPAN3-201ENST00000267970 DSCAMO60469 2012 aa12.24□□□□□ -0.45
TSPAN3-201ENST00000267970 TSPEAR-AS2P59090 65 aa12.24□□□□□ -0.45
TSPAN3-201ENST00000267970 LINC00574Q9H8X3 128 aa12.24□□□□□ -0.45
TSPAN3-201ENST00000267970 PRYO14603 147 aa12.23□□□□□ -0.45
TSPAN3-201ENST00000267970 A8MTW9 85 aa12.23□□□□□ -0.45
TSPAN3-201ENST00000267970 IGHV6-1A0A0B4J1U7 121 aa12.23□□□□□ -0.45
TSPAN3-201ENST00000267970 UBE2D2P62837 147 aa12.23□□□□□ -0.45
TSPAN3-201ENST00000267970 Q6JHZ5 121 aa12.23□□□□□ -0.45
TSPAN3-201ENST00000267970 SMR3AQ99954 134 aa12.23□□□□□ -0.45
TSPAN3-201ENST00000267970 LINC01547P58512 204 aaPredicted RBP12.23□□□□□ -0.45
TSPAN3-201ENST00000267970 LY6G6DO95868 133 aa12.22□□□□□ -0.45
TSPAN3-201ENST00000267970 OXLD1Q5BKU9 147 aa12.22□□□□□ -0.45
TSPAN3-201ENST00000267970 TRAV7A0A075B6U4 112 aa12.21□□□□□ -0.45
TSPAN3-201ENST00000267970 PYGO1Q9Y3Y4 419 aa12.21□□□□□ -0.45
TSPAN3-201ENST00000267970 C6orf223Q8N319 242 aa12.21□□□□□ -0.45
TSPAN3-201ENST00000267970 DHRS4-AS1Q9P1J3 65 aa12.21□□□□□ -0.45
TSPAN3-201ENST00000267970 LINC00310P59036 64 aa12.21□□□□□ -0.46
TSPAN3-201ENST00000267970 URB1-AS1Q96HZ7 61 aa12.2□□□□□ -0.46
TSPAN3-201ENST00000267970 ADAMTSL4-AS1Q5T5F5 129 aa12.19□□□□□ -0.46
TSPAN3-201ENST00000267970 CDC42SE2Q9NRR3 84 aa12.19□□□□□ -0.46
TSPAN3-201ENST00000267970 TRBV10-3A0A0K0K1G6 114 aa12.19□□□□□ -0.46
TSPAN3-201ENST00000267970 POLR2KP53803 58 aaKnown RBP12.19□□□□□ -0.46
TSPAN3-201ENST00000267970 NTM-AS1Q6ZSK4 140 aa12.19□□□□□ -0.46
TSPAN3-201ENST00000267970 FBXL19-AS1Q494R0 122 aa12.18□□□□□ -0.46
TSPAN3-201ENST00000267970 CSDC2Q9Y534 153 aaKnown RBP12.18□□□□□ -0.46
TSPAN3-201ENST00000267970 SPG11Q96JI7 2443 aa12.18□□□□□ -0.46
TSPAN3-201ENST00000267970 TRBV7-7A0A0K0K1E9 115 aa12.18□□□□□ -0.46
TSPAN3-201ENST00000267970 BRI3O95415 125 aa12.18□□□□□ -0.46
TSPAN3-201ENST00000267970 EML5Q05BV3 1969 aa12.18□□□□□ -0.46
TSPAN3-201ENST00000267970 IGLV4-60A0A075B6I1 120 aa12.18□□□□□ -0.46
TSPAN3-201ENST00000267970 TRAV10A0A0B4J240 114 aa12.18□□□□□ -0.46
TSPAN3-201ENST00000267970 CSPG4Q6UVK1 2322 aa12.18□□□□□ -0.46
TSPAN3-201ENST00000267970 C10orf25Q5T742 122 aa12.17□□□□□ -0.46
TSPAN3-201ENST00000267970 LELP1Q5T871 98 aa12.17□□□□□ -0.46
TSPAN3-201ENST00000267970 LINC01006Q8NI28 216 aa12.17□□□□□ -0.46
TSPAN3-201ENST00000267970 PTPN13Q12923 2485 aa12.16□□□□□ -0.46
TSPAN3-201ENST00000267970 CDSNQ15517 529 aa12.16□□□□□ -0.46
TSPAN3-201ENST00000267970 SERTAD4-AS1Q5TG53 156 aa12.16□□□□□ -0.46
TSPAN3-201ENST00000267970 HIVEP2P31629 2446 aa12.16□□□□□ -0.46
TSPAN3-201ENST00000267970 MUC4Q99102 2169 aa12.16□□□□□ -0.46
TSPAN3-201ENST00000267970 LINC00242Q5T6M2 205 aa12.16□□□□□ -0.46
TSPAN3-201ENST00000267970 Q8N814 137 aa12.16□□□□□ -0.46
TSPAN3-201ENST00000267970 Q8N3U1 123 aa12.15□□□□□ -0.46
TSPAN3-201ENST00000267970 EXPH5Q8NEV8 1989 aa12.15□□□□□ -0.46
TSPAN3-201ENST00000267970 IGIPA6NJ69 53 aa12.15□□□□□ -0.46
TSPAN3-201ENST00000267970 KLLNB2CW77 178 aa12.15□□□□□ -0.46
TSPAN3-201ENST00000267970 PRORYQ9H606 182 aa12.15□□□□□ -0.46
TSPAN3-201ENST00000267970 MRPS36P82909 103 aaKnown RBP12.15□□□□□ -0.46
TSPAN3-201ENST00000267970 C11orf71Q6IPW1 123 aa12.14□□□□□ -0.47
TSPAN3-201ENST00000267970 C1orf137Q5JT78 98 aa12.14□□□□□ -0.47
TSPAN3-201ENST00000267970 OTOGLQ3ZCN5 2332 aa12.14□□□□□ -0.47
TSPAN3-201ENST00000267970 IL17DQ8TAD2 202 aa12.13□□□□□ -0.47
TSPAN3-201ENST00000267970 SBSPONQ8IVN8 264 aa12.13□□□□□ -0.47
TSPAN3-201ENST00000267970 PRRC2AP48634 2157 aaKnown RBP12.12□□□□□ -0.47
TSPAN3-201ENST00000267970 LINC00575Q6W349 94 aa12.11□□□□□ -0.47
TSPAN3-201ENST00000267970 H0Y9P7 68 aa12.11□□□□□ -0.47
TSPAN3-201ENST00000267970 AVPP01185 164 aa12.11□□□□□ -0.47
TSPAN3-201ENST00000267970 SMIM1B2RUZ4 78 aa12.11□□□□□ -0.47
TSPAN3-201ENST00000267970 PLA2G1BP04054 148 aaKnown RBP12.11□□□□□ -0.47
TSPAN3-201ENST00000267970 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.11□□□□□ -0.47
TSPAN3-201ENST00000267970 Q6ZSN1 163 aa12.11□□□□□ -0.47
TSPAN3-201ENST00000267970 SONP18583 2426 aaKnown RBP12.1□□□□□ -0.47
TSPAN3-201ENST00000267970 Q8IZM0 81 aa12.1□□□□□ -0.47
TSPAN3-201ENST00000267970 PSMG3-AS1Q96PY0 264 aa12.1□□□□□ -0.47
TSPAN3-201ENST00000267970 ZNF706Q9Y5V0 76 aaPredicted RBP12.1□□□□□ -0.47
TSPAN3-201ENST00000267970 BDP1A6H8Y1 2624 aa12.1□□□□□ -0.47
TSPAN3-201ENST00000267970 CHCHD7Q9BUK0 85 aa12.09□□□□□ -0.47
TSPAN3-201ENST00000267970 C4orf26Q17RF5 130 aa12.08□□□□□ -0.48
TSPAN3-201ENST00000267970 REG3GQ6UW15 175 aa12.08□□□□□ -0.48
TSPAN3-201ENST00000267970 COX17Q14061 63 aa12.08□□□□□ -0.48
TSPAN3-201ENST00000267970 MRGPRG-AS1Q2M3A8 158 aa12.08□□□□□ -0.48
TSPAN3-201ENST00000267970 Q8N6K4 173 aa12.08□□□□□ -0.48
TSPAN3-201ENST00000267970 ATG2AQ2TAZ0 1938 aa12.07□□□□□ -0.48
TSPAN3-201ENST00000267970 CUL9Q8IWT3 2517 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms