RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 Q6JHZ5 121 aa13.12□□□□□ -0.31
COL5A3-201ENST00000264828 ZNF706Q9Y5V0 76 aaPredicted RBP13.12□□□□□ -0.31
COL5A3-201ENST00000264828 C1orf195Q5TG92 126 aa13.11□□□□□ -0.31
COL5A3-201ENST00000264828 Q8N6K4 173 aa13.11□□□□□ -0.31
COL5A3-201ENST00000264828 UBE2D3P61077 147 aa13.1□□□□□ -0.31
COL5A3-201ENST00000264828 Q6Q795 121 aa13.1□□□□□ -0.31
COL5A3-201ENST00000264828 COX17Q14061 63 aa13.09□□□□□ -0.31
COL5A3-201ENST00000264828 CDC42SE2Q9NRR3 84 aa13.09□□□□□ -0.31
COL5A3-201ENST00000264828 SOSTDC1Q6X4U4 206 aa13.09□□□□□ -0.31
COL5A3-201ENST00000264828 NANOS2P60321 138 aaKnown RBP13.09□□□□□ -0.31
COL5A3-201ENST00000264828 C9orf116Q5BN46 136 aaPredicted RBP13.09□□□□□ -0.31
COL5A3-201ENST00000264828 TECTAO75443 2155 aa13.09□□□□□ -0.31
COL5A3-201ENST00000264828 CYSRT1A8MQ03 144 aa13.09□□□□□ -0.31
COL5A3-201ENST00000264828 A0A087WVE0 104 aa13.09□□□□□ -0.31
COL5A3-201ENST00000264828 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.08□□□□□ -0.32
COL5A3-201ENST00000264828 RETNQ9HD89 108 aa13.08□□□□□ -0.32
COL5A3-201ENST00000264828 UBE2D2P62837 147 aa13.07□□□□□ -0.32
COL5A3-201ENST00000264828 Q8IZM0 81 aa13.07□□□□□ -0.32
COL5A3-201ENST00000264828 MED12LQ86YW9 2145 aa13.07□□□□□ -0.32
COL5A3-201ENST00000264828 LINC01006Q8NI28 216 aa13.07□□□□□ -0.32
COL5A3-201ENST00000264828 A0A087WYN8 130 aa13.07□□□□□ -0.32
COL5A3-201ENST00000264828 IGIPA6NJ69 53 aa13.07□□□□□ -0.32
COL5A3-201ENST00000264828 COX6A2Q02221 97 aa13.07□□□□□ -0.32
COL5A3-201ENST00000264828 PRR3P79522 188 aaKnown RBP13.06□□□□□ -0.32
COL5A3-201ENST00000264828 SHISA2Q6UWI4 295 aa13.06□□□□□ -0.32
COL5A3-201ENST00000264828 NTM-AS1Q6ZSK4 140 aa13.06□□□□□ -0.32
COL5A3-201ENST00000264828 LINC00310P59036 64 aa13.05□□□□□ -0.32
COL5A3-201ENST00000264828 M0QXV9 152 aa13.05□□□□□ -0.32
COL5A3-201ENST00000264828 URB1-AS1Q96HZ7 61 aa13.05□□□□□ -0.32
COL5A3-201ENST00000264828 UNQ6190/PRO20217Q6UXQ8 127 aa13.05□□□□□ -0.32
COL5A3-201ENST00000264828 ESRGQ1W209 222 aa13.04□□□□□ -0.32
COL5A3-201ENST00000264828 IGLV1-40P01703 118 aa13.04□□□□□ -0.32
COL5A3-201ENST00000264828 C10orf25Q5T742 122 aa13.04□□□□□ -0.32
COL5A3-201ENST00000264828 PLA2G2AP14555 144 aa13.04□□□□□ -0.32
COL5A3-201ENST00000264828 LINC00242Q5T6M2 205 aa13.04□□□□□ -0.32
COL5A3-201ENST00000264828 RETNLBQ9BQ08 111 aa13.03□□□□□ -0.32
COL5A3-201ENST00000264828 TSPEAR-AS2P59090 65 aa13.03□□□□□ -0.32
COL5A3-201ENST00000264828 LY6G6CO95867 125 aa13.03□□□□□ -0.32
COL5A3-201ENST00000264828 Q8N814 137 aa13.03□□□□□ -0.32
COL5A3-201ENST00000264828 PCNX3Q9H6A9 2034 aa13.02□□□□□ -0.32
COL5A3-201ENST00000264828 CDSNQ15517 529 aa13.02□□□□□ -0.32
COL5A3-201ENST00000264828 MRGPRG-AS1Q2M3A8 158 aa13.02□□□□□ -0.33
COL5A3-201ENST00000264828 PCDH15Q96QU1 1955 aa13.02□□□□□ -0.33
COL5A3-201ENST00000264828 LINC00208Q96KT6 92 aa13.01□□□□□ -0.33
COL5A3-201ENST00000264828 LRP4O75096 1905 aa13.01□□□□□ -0.33
COL5A3-201ENST00000264828 TRBV10-3A0A0K0K1G6 114 aa13.01□□□□□ -0.33
COL5A3-201ENST00000264828 SMIM26A0A096LP01 95 aa13.01□□□□□ -0.33
COL5A3-201ENST00000264828 TRAV7A0A075B6U4 112 aa13□□□□□ -0.33
COL5A3-201ENST00000264828 Q6ZVQ6 151 aa13□□□□□ -0.33
COL5A3-201ENST00000264828 SMIM1B2RUZ4 78 aa13□□□□□ -0.33
COL5A3-201ENST00000264828 ZFHX2Q9C0A1 2572 aaPredicted RBP12.99□□□□□ -0.33
COL5A3-201ENST00000264828 ZNF580Q9UK33 172 aa12.99□□□□□ -0.33
COL5A3-201ENST00000264828 CNFNQ9BYD5 112 aa12.99□□□□□ -0.33
COL5A3-201ENST00000264828 CHCHD7Q9BUK0 85 aa12.99□□□□□ -0.33
COL5A3-201ENST00000264828 C1orf137Q5JT78 98 aa12.98□□□□□ -0.33
COL5A3-201ENST00000264828 ADAMTSL4-AS1Q5T5F5 129 aa12.98□□□□□ -0.33
COL5A3-201ENST00000264828 IGLV4-60A0A075B6I1 120 aa12.97□□□□□ -0.33
COL5A3-201ENST00000264828 CIRBP-AS1Q8TBR5 109 aa12.97□□□□□ -0.33
COL5A3-201ENST00000264828 IGHV6-1A0A0B4J1U7 121 aa12.96□□□□□ -0.33
COL5A3-201ENST00000264828 OXLD1Q5BKU9 147 aa12.96□□□□□ -0.33
COL5A3-201ENST00000264828 FAM208BQ5VWN6 2430 aa12.96□□□□□ -0.34
COL5A3-201ENST00000264828 PRYO14603 147 aa12.96□□□□□ -0.34
COL5A3-201ENST00000264828 PRR14LQ5THK1 2151 aa12.95□□□□□ -0.34
COL5A3-201ENST00000264828 C6orf223Q8N319 242 aa12.95□□□□□ -0.34
COL5A3-201ENST00000264828 REG3GQ6UW15 175 aa12.95□□□□□ -0.34
COL5A3-201ENST00000264828 C10orf142B7Z368 130 aa12.95□□□□□ -0.34
COL5A3-201ENST00000264828 PMAIP1Q13794 54 aa12.95□□□□□ -0.34
COL5A3-201ENST00000264828 PCOTHQ58A44 107 aa12.95□□□□□ -0.34
COL5A3-201ENST00000264828 RPL28P46779 137 aaKnown RBP12.94□□□□□ -0.34
COL5A3-201ENST00000264828 HCFC1P51610 2035 aa12.93□□□□□ -0.34
COL5A3-201ENST00000264828 TRBV7-6A0A0J9YX20 115 aa12.93□□□□□ -0.34
COL5A3-201ENST00000264828 PSPHP1O15172 72 aa12.93□□□□□ -0.34
COL5A3-201ENST00000264828 LINC01547P58512 204 aaPredicted RBP12.93□□□□□ -0.34
COL5A3-201ENST00000264828 DEFB116Q30KQ4 102 aa12.93□□□□□ -0.34
COL5A3-201ENST00000264828 LINC00474Q9P2X8 69 aa12.93□□□□□ -0.34
COL5A3-201ENST00000264828 AVPP01185 164 aa12.92□□□□□ -0.34
COL5A3-201ENST00000264828 DSCAMO60469 2012 aa12.92□□□□□ -0.34
COL5A3-201ENST00000264828 ODF3L2Q3SX64 289 aa12.92□□□□□ -0.34
COL5A3-201ENST00000264828 PLXNB1O43157 2135 aa12.92□□□□□ -0.34
COL5A3-201ENST00000264828 PTPRQQ9UMZ3 2332 aa12.91□□□□□ -0.34
COL5A3-201ENST00000264828 X6R8D5 127 aa12.91□□□□□ -0.34
COL5A3-201ENST00000264828 WNK1Q9H4A3 2382 aa12.9□□□□□ -0.34
COL5A3-201ENST00000264828 BEAN1Q3B7T3 259 aa12.9□□□□□ -0.34
COL5A3-201ENST00000264828 Q8N3U1 123 aa12.9□□□□□ -0.34
COL5A3-201ENST00000264828 HIVEP2P31629 2446 aa12.9□□□□□ -0.34
COL5A3-201ENST00000264828 SMR3AQ99954 134 aa12.9□□□□□ -0.34
COL5A3-201ENST00000264828 EGFEM1PQ0D2K5 195 aa12.89□□□□□ -0.35
COL5A3-201ENST00000264828 LINC00575Q6W349 94 aa12.89□□□□□ -0.35
COL5A3-201ENST00000264828 ATG2AQ2TAZ0 1938 aa12.89□□□□□ -0.35
COL5A3-201ENST00000264828 MUC7Q8TAX7 377 aa12.89□□□□□ -0.35
COL5A3-201ENST00000264828 BRI3O95415 125 aa12.88□□□□□ -0.35
COL5A3-201ENST00000264828 SPINK1P00995 79 aa12.88□□□□□ -0.35
COL5A3-201ENST00000264828 ARHGAP32A7KAX9 2087 aa12.88□□□□□ -0.35
COL5A3-201ENST00000264828 Q6ZSN1 163 aa12.87□□□□□ -0.35
COL5A3-201ENST00000264828 TRBV7-7A0A0K0K1E9 115 aa12.87□□□□□ -0.35
COL5A3-201ENST00000264828 COL5A1P20908 1838 aaPredicted RBP12.86□□□□□ -0.35
COL5A3-201ENST00000264828 A8MTW9 85 aa12.86□□□□□ -0.35
COL5A3-201ENST00000264828 FHL2Q14192 279 aa12.86□□□□□ -0.35
COL5A3-201ENST00000264828 KRTAP10-9P60411 292 aa12.86□□□□□ -0.35
COL5A3-201ENST00000264828 Q9BRP9 147 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms