RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 ATP5LO75964 103 aa12.2□□□□□ -0.46
CYSTM1-201ENST00000261811 LINC00242Q5T6M2 205 aa12.2□□□□□ -0.46
CYSTM1-201ENST00000261811 LINC00173Q6ZV60 143 aa12.2□□□□□ -0.46
CYSTM1-201ENST00000261811 C9orf163Q8N9P6 203 aa12.2□□□□□ -0.46
CYSTM1-201ENST00000261811 URB1-AS1Q96HZ7 61 aa12.2□□□□□ -0.46
CYSTM1-201ENST00000261811 HSBP1O75506 76 aa12.19□□□□□ -0.46
CYSTM1-201ENST00000261811 HERVK_113P63121 156 aa12.19□□□□□ -0.46
CYSTM1-201ENST00000261811 GEMIN7Q9H840 131 aaKnown RBP12.19□□□□□ -0.46
CYSTM1-201ENST00000261811 PKIGQ9Y2B9 76 aa12.19□□□□□ -0.46
CYSTM1-201ENST00000261811 PMVKQ15126 192 aa12.18□□□□□ -0.46
CYSTM1-201ENST00000261811 FAM19A3Q7Z5A8 133 aa12.18□□□□□ -0.46
CYSTM1-201ENST00000261811 OR10D4PQ8NGN7 298 aa12.18□□□□□ -0.46
CYSTM1-201ENST00000261811 IGHV3-64A0A075B6Q5 118 aa12.17□□□□□ -0.46
CYSTM1-201ENST00000261811 PMCHL1Q16048 86 aa12.17□□□□□ -0.46
CYSTM1-201ENST00000261811 ZC2HC1BQ5TFG8 222 aa12.17□□□□□ -0.46
CYSTM1-201ENST00000261811 A0A087WZ39 114 aa12.16□□□□□ -0.46
CYSTM1-201ENST00000261811 NDUFA6P56556 154 aa12.16□□□□□ -0.46
CYSTM1-201ENST00000261811 LINC01561Q8N1V8 128 aa12.16□□□□□ -0.46
CYSTM1-201ENST00000261811 CST9LQ9H4G1 147 aa12.16□□□□□ -0.46
CYSTM1-201ENST00000261811 DNAH11Q96DT5 4516 aa12.16□□□□□ -0.46
CYSTM1-201ENST00000261811 A0A096LNJ9 63 aa12.15□□□□□ -0.46
CYSTM1-201ENST00000261811 LINC01620Q4KN68 170 aa12.15□□□□□ -0.46
CYSTM1-201ENST00000261811 PDZD11Q5EBL8 140 aa12.15□□□□□ -0.46
CYSTM1-201ENST00000261811 ORAOV1Q8WV07 137 aa12.15□□□□□ -0.46
CYSTM1-201ENST00000261811 KRTAP17-1Q9BYP8 105 aa12.15□□□□□ -0.46
CYSTM1-201ENST00000261811 F8WDY8 70 aa12.14□□□□□ -0.47
CYSTM1-201ENST00000261811 ATP6V1G1O75348 118 aa12.14□□□□□ -0.47
CYSTM1-201ENST00000261811 COX6A2Q02221 97 aa12.14□□□□□ -0.47
CYSTM1-201ENST00000261811 SPAG11BQ08648 103 aa12.14□□□□□ -0.47
CYSTM1-201ENST00000261811 C2orf48Q96LS8 159 aa12.14□□□□□ -0.47
CYSTM1-201ENST00000261811 TINCRA0A1B0GVN0 87 aa12.13□□□□□ -0.47
CYSTM1-201ENST00000261811 SYCNQ0VAF6 134 aa12.13□□□□□ -0.47
CYSTM1-201ENST00000261811 CARD19Q96LW7 228 aa12.13□□□□□ -0.47
CYSTM1-201ENST00000261811 PACRGQ96M98 296 aaPredicted RBP12.13□□□□□ -0.47
CYSTM1-201ENST00000261811 CAMK2N2Q96S95 79 aa12.13□□□□□ -0.47
CYSTM1-201ENST00000261811 IGLV4-69A0A075B6H9 119 aa12.12□□□□□ -0.47
CYSTM1-201ENST00000261811 A0A0J9YXV3 536 aa12.11□□□□□ -0.47
CYSTM1-201ENST00000261811 SERF1AO75920 110 aa12.11□□□□□ -0.47
CYSTM1-201ENST00000261811 SLPIP03973 132 aa12.11□□□□□ -0.47
CYSTM1-201ENST00000261811 HERC2O95714 4834 aa12.11□□□□□ -0.47
CYSTM1-201ENST00000261811 PRSS2P07478 247 aa12.11□□□□□ -0.47
CYSTM1-201ENST00000261811 LINC00469Q8N7U9 141 aa12.11□□□□□ -0.47
CYSTM1-201ENST00000261811 LINC00526Q96FQ7 95 aa12.11□□□□□ -0.47
CYSTM1-201ENST00000261811 H3BRM9 83 aa12.1□□□□□ -0.47
CYSTM1-201ENST00000261811 SDIM1Q6ZPB5 146 aa12.1□□□□□ -0.47
CYSTM1-201ENST00000261811 Q6ZSA8 131 aa12.1□□□□□ -0.47
CYSTM1-201ENST00000261811 IFI27L1Q96BM0 104 aa12.1□□□□□ -0.47
CYSTM1-201ENST00000261811 NDUFA1O15239 70 aa12.09□□□□□ -0.47
CYSTM1-201ENST00000261811 FAM19A2Q8N3H0 131 aa12.09□□□□□ -0.47
CYSTM1-201ENST00000261811 DPH3Q96FX2 82 aa12.09□□□□□ -0.47
CYSTM1-201ENST00000261811 CDKN2A-AS1Q9UH64 79 aa12.09□□□□□ -0.47
CYSTM1-201ENST00000261811 LEPROTL1O95214 131 aa12.08□□□□□ -0.48
CYSTM1-201ENST00000261811 XGP55808 180 aa12.08□□□□□ -0.48
CYSTM1-201ENST00000261811 FAM30AQ9NZY2 134 aa12.08□□□□□ -0.48
CYSTM1-201ENST00000261811 HIST1H2BKO60814 126 aa12.07□□□□□ -0.48
CYSTM1-201ENST00000261811 HIST1H2BJP06899 126 aa12.07□□□□□ -0.48
CYSTM1-201ENST00000261811 HIST1H2BOP23527 126 aa12.07□□□□□ -0.48
CYSTM1-201ENST00000261811 HIST1H2BBP33778 126 aa12.07□□□□□ -0.48
CYSTM1-201ENST00000261811 HIST1H2BDP58876 126 aa12.07□□□□□ -0.48
CYSTM1-201ENST00000261811 HIST1H2BCP62807 126 aa12.07□□□□□ -0.48
CYSTM1-201ENST00000261811 HIST2H2BEQ16778 126 aa12.07□□□□□ -0.48
CYSTM1-201ENST00000261811 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.07□□□□□ -0.48
CYSTM1-201ENST00000261811 HIST1H2BHQ93079 126 aa12.07□□□□□ -0.48
CYSTM1-201ENST00000261811 HIST1H2BNQ99877 126 aa12.07□□□□□ -0.48
CYSTM1-201ENST00000261811 HIST1H2BMQ99879 126 aa12.07□□□□□ -0.48
CYSTM1-201ENST00000261811 CHAC1Q9BUX1 264 aa12.07□□□□□ -0.48
CYSTM1-201ENST00000261811 HSPB8Q9UJY1 196 aa12.07□□□□□ -0.48
CYSTM1-201ENST00000261811 IGLC3P0DOY3 106 aa12.06□□□□□ -0.48
CYSTM1-201ENST00000261811 CKS1BP61024 79 aa12.06□□□□□ -0.48
CYSTM1-201ENST00000261811 RNF151Q2KHN1 245 aa12.06□□□□□ -0.48
CYSTM1-201ENST00000261811 C6orf226Q5I0X4 101 aa12.06□□□□□ -0.48
CYSTM1-201ENST00000261811 Q6ZRU5 148 aa12.06□□□□□ -0.48
CYSTM1-201ENST00000261811 TOMM7Q9P0U1 55 aa12.06□□□□□ -0.48
CYSTM1-201ENST00000261811 LINC00474Q9P2X8 69 aa12.06□□□□□ -0.48
CYSTM1-201ENST00000261811 IGLV5-45A0A087WSX0 123 aa12.05□□□□□ -0.48
CYSTM1-201ENST00000261811 TRAV12-1A0A0B4J245 112 aa12.05□□□□□ -0.48
CYSTM1-201ENST00000261811 Q8IZM0 81 aa12.05□□□□□ -0.48
CYSTM1-201ENST00000261811 MRPL35Q9NZE8 188 aaKnown RBP12.05□□□□□ -0.48
CYSTM1-201ENST00000261811 CHTOPQ9Y3Y2 248 aaKnown RBP12.05□□□□□ -0.48
CYSTM1-201ENST00000261811 LOC107984640A0A0U1RRK4 108 aa12.04□□□□□ -0.48
CYSTM1-201ENST00000261811 DYNC1H1Q14204 4646 aaKnown RBP12.03□□□□□ -0.48
CYSTM1-201ENST00000261811 DNAH5Q8TE73 4624 aa12.02□□□□□ -0.48
CYSTM1-201ENST00000261811 CXCL5P42830 114 aa12.02□□□□□ -0.49
CYSTM1-201ENST00000261811 LINC00310P59036 64 aa12.02□□□□□ -0.49
CYSTM1-201ENST00000261811 KIAA0087Q14695 138 aa12.02□□□□□ -0.49
CYSTM1-201ENST00000261811 SCXQ7RTU7 201 aa12.02□□□□□ -0.49
CYSTM1-201ENST00000261811 TRBV30A0A0K0K1B3 111 aa12.01□□□□□ -0.49
CYSTM1-201ENST00000261811 Q8N1X5 172 aa12.01□□□□□ -0.49
CYSTM1-201ENST00000261811 KIAA1109Q2LD37 5005 aa12□□□□□ -0.49
CYSTM1-201ENST00000261811 SMIM1B2RUZ4 78 aa12□□□□□ -0.49
CYSTM1-201ENST00000261811 FAM229AH3BQW9 127 aa12□□□□□ -0.49
CYSTM1-201ENST00000261811 NUPR1O60356 82 aa12□□□□□ -0.49
CYSTM1-201ENST00000261811 FABP4P15090 132 aa12□□□□□ -0.49
CYSTM1-201ENST00000261811 TMEM170BQ5T4T1 132 aa12□□□□□ -0.49
CYSTM1-201ENST00000261811 CIRBP-AS1Q8TBR5 109 aa12□□□□□ -0.49
CYSTM1-201ENST00000261811 IGKV2-24A0A0C4DH68 120 aa11.99□□□□□ -0.49
CYSTM1-201ENST00000261811 F8VRH5 84 aa11.99□□□□□ -0.49
CYSTM1-201ENST00000261811 H0Y8G0 127 aa11.99□□□□□ -0.49
CYSTM1-201ENST00000261811 SPINK8P0C7L1 97 aa11.99□□□□□ -0.49
CYSTM1-201ENST00000261811 HAMPP81172 84 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms