RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 PLEKHB2Q96CS7 222 aa11.4□□□□□ -0.58
HLA-F-216ENST00000259951 KLK12Q9UKR0 248 aa11.4□□□□□ -0.58
HLA-F-216ENST00000259951 LINC00588Q9Y4M8 146 aa11.4□□□□□ -0.58
HLA-F-216ENST00000259951 CLPSL2Q6UWE3 100 aa11.39□□□□□ -0.59
HLA-F-216ENST00000259951 PRR34Q9NV39 138 aa11.39□□□□□ -0.59
HLA-F-216ENST00000259951 APLNQ9ULZ1 77 aa11.39□□□□□ -0.59
HLA-F-216ENST00000259951 CRPP02741 224 aa11.38□□□□□ -0.59
HLA-F-216ENST00000259951 DNAH10OSP0CZ25 163 aa11.38□□□□□ -0.59
HLA-F-216ENST00000259951 PCP2Q8IVA1 136 aa11.38□□□□□ -0.59
HLA-F-216ENST00000259951 UPK3BQ9BT76 320 aa11.38□□□□□ -0.59
HLA-F-216ENST00000259951 IGHV1-58A0A0C4DH39 117 aa11.38□□□□□ -0.59
HLA-F-216ENST00000259951 HNRNPA3P51991 378 aaKnown RBP11.38□□□□□ -0.59
HLA-F-216ENST00000259951 J3QQQ9 107 aa11.37□□□□□ -0.59
HLA-F-216ENST00000259951 M0R143 59 aa11.37□□□□□ -0.59
HLA-F-216ENST00000259951 SIVA1O15304 175 aa11.37□□□□□ -0.59
HLA-F-216ENST00000259951 SPINK8P0C7L1 97 aa11.37□□□□□ -0.59
HLA-F-216ENST00000259951 LGALS3P17931 250 aaKnown RBP11.37□□□□□ -0.59
HLA-F-216ENST00000259951 TRAV8-4A0A0B4J246 113 aa11.36□□□□□ -0.59
HLA-F-216ENST00000259951 IGHV3OR16-9A0A0B4J2B5 98 aa11.36□□□□□ -0.59
HLA-F-216ENST00000259951 IGHV3-64A0A075B6Q5 118 aa11.35□□□□□ -0.59
HLA-F-216ENST00000259951 XCL1P47992 114 aa11.35□□□□□ -0.59
HLA-F-216ENST00000259951 MIAQ16674 131 aa11.35□□□□□ -0.59
HLA-F-216ENST00000259951 CD164L2Q6UWJ8 174 aa11.35□□□□□ -0.59
HLA-F-216ENST00000259951 A0A087WZ39 114 aa11.35□□□□□ -0.59
HLA-F-216ENST00000259951 TRAV8-3A0A0A6YYJ7 113 aa11.35□□□□□ -0.59
HLA-F-216ENST00000259951 MYMXA0A1B0GTQ4 84 aa11.35□□□□□ -0.59
HLA-F-216ENST00000259951 LINC01561Q8N1V8 128 aa11.35□□□□□ -0.59
HLA-F-216ENST00000259951 CHCHD10Q8WYQ3 142 aaPredicted RBP11.35□□□□□ -0.59
HLA-F-216ENST00000259951 UBE2WQ96B02 151 aa11.35□□□□□ -0.59
HLA-F-216ENST00000259951 IGLV5-39A0A0G2JS06 123 aa11.34□□□□□ -0.59
HLA-F-216ENST00000259951 ZNF815PA8K554 130 aa11.34□□□□□ -0.59
HLA-F-216ENST00000259951 SMIM1B2RUZ4 78 aa11.34□□□□□ -0.59
HLA-F-216ENST00000259951 ENHOQ6UWT2 76 aa11.34□□□□□ -0.59
HLA-F-216ENST00000259951 UBE2DNLQ8IWF7 75 aa11.34□□□□□ -0.59
HLA-F-216ENST00000259951 TTTY13Q9BZ97 58 aa11.33□□□□□ -0.6
HLA-F-216ENST00000259951 K7EP13 123 aa11.32□□□□□ -0.6
HLA-F-216ENST00000259951 C10orf126Q8N4M7 172 aa11.32□□□□□ -0.6
HLA-F-216ENST00000259951 MAPKAPK5-AS1Q8N8E1 139 aa11.32□□□□□ -0.6
HLA-F-216ENST00000259951 IGLV10-54A0A075B6I4 117 aa11.31□□□□□ -0.6
HLA-F-216ENST00000259951 TSPEAR-AS2P59090 65 aa11.31□□□□□ -0.6
HLA-F-216ENST00000259951 C5orf38Q86SI9 138 aa11.31□□□□□ -0.6
HLA-F-216ENST00000259951 SNHG12Q9BXW3 62 aa11.31□□□□□ -0.6
HLA-F-216ENST00000259951 COX7A2LO14548 114 aa11.31□□□□□ -0.6
HLA-F-216ENST00000259951 EREGO14944 169 aa11.31□□□□□ -0.6
HLA-F-216ENST00000259951 Q9H8V8 135 aa11.31□□□□□ -0.6
HLA-F-216ENST00000259951 HIGD1BQ9P298 99 aa11.31□□□□□ -0.6
HLA-F-216ENST00000259951 TP73-AS1Q9UF72 201 aa11.31□□□□□ -0.6
HLA-F-216ENST00000259951 ZFAND6Q6FIF0 208 aa11.3□□□□□ -0.6
HLA-F-216ENST00000259951 GAGE12HA6NDE8 117 aa11.29□□□□□ -0.6
HLA-F-216ENST00000259951 SCGB1D4Q6XE38 83 aa11.29□□□□□ -0.6
HLA-F-216ENST00000259951 C2orf91Q6ZV80 131 aa11.29□□□□□ -0.6
HLA-F-216ENST00000259951 MUC7Q8TAX7 377 aa11.29□□□□□ -0.6
HLA-F-216ENST00000259951 MALP21145 153 aa11.28□□□□□ -0.6
HLA-F-216ENST00000259951 FOXI1Q12951 378 aa11.28□□□□□ -0.6
HLA-F-216ENST00000259951 NDUFA12Q9UI09 145 aa11.28□□□□□ -0.6
HLA-F-216ENST00000259951 IBA57-AS1B1ANH7 110 aa11.27□□□□□ -0.6
HLA-F-216ENST00000259951 APOMO95445 188 aa11.27□□□□□ -0.6
HLA-F-216ENST00000259951 COX7B2Q8TF08 81 aa11.27□□□□□ -0.6
HLA-F-216ENST00000259951 WWC2-AS2Q96NR7 200 aa11.27□□□□□ -0.6
HLA-F-216ENST00000259951 C1orf43Q9BWL3 253 aa11.27□□□□□ -0.6
HLA-F-216ENST00000259951 NDUFA1O15239 70 aa11.26□□□□□ -0.61
HLA-F-216ENST00000259951 RMI2Q96E14 147 aa11.26□□□□□ -0.61
HLA-F-216ENST00000259951 PRSS2P07478 247 aa11.25□□□□□ -0.61
HLA-F-216ENST00000259951 SFTA2Q6UW10 78 aa11.25□□□□□ -0.61
HLA-F-216ENST00000259951 TOMM7Q9P0U1 55 aa11.25□□□□□ -0.61
HLA-F-216ENST00000259951 IGKV2D-24A0A075B6R9 120 aa11.24□□□□□ -0.61
HLA-F-216ENST00000259951 HERV-K104P63124 156 aa11.24□□□□□ -0.61
HLA-F-216ENST00000259951 HSD52Q0P140 79 aa11.24□□□□□ -0.61
HLA-F-216ENST00000259951 Q8IZM0 81 aa11.24□□□□□ -0.61
HLA-F-216ENST00000259951 TAL2Q16559 108 aa11.23□□□□□ -0.61
HLA-F-216ENST00000259951 C6orf226Q5I0X4 101 aa11.23□□□□□ -0.61
HLA-F-216ENST00000259951 ORAOV1Q8WV07 137 aa11.23□□□□□ -0.61
HLA-F-216ENST00000259951 Q9HAA7 133 aa11.23□□□□□ -0.61
HLA-F-216ENST00000259951 A0A0J9YXY3 114 aa11.22□□□□□ -0.61
HLA-F-216ENST00000259951 COL5A1-AS1Q5SY13 56 aa11.21□□□□□ -0.61
HLA-F-216ENST00000259951 CFAP161Q6P656 301 aa11.21□□□□□ -0.61
HLA-F-216ENST00000259951 KRTAP26-1Q6PEX3 210 aa11.21□□□□□ -0.61
HLA-F-216ENST00000259951 ZNF625Q96I27 306 aaPredicted RBP11.21□□□□□ -0.61
HLA-F-216ENST00000259951 COX11Q9Y6N1 276 aa11.21□□□□□ -0.61
HLA-F-216ENST00000259951 A0A1B0GV90 55 aa11.2□□□□□ -0.62
HLA-F-216ENST00000259951 TMEM238C9JI98 176 aa11.2□□□□□ -0.62
HLA-F-216ENST00000259951 CXCL5P42830 114 aa11.2□□□□□ -0.62
HLA-F-216ENST00000259951 CIRBPQ14011 172 aaKnown RBP11.2□□□□□ -0.62
HLA-F-216ENST00000259951 TTC32Q5I0X7 151 aa11.2□□□□□ -0.62
HLA-F-216ENST00000259951 HIST1H4GQ99525 98 aa11.2□□□□□ -0.62
HLA-F-216ENST00000259951 SPANXB1Q9NS25 103 aaPredicted RBP11.2□□□□□ -0.62
HLA-F-216ENST00000259951 TIMM17BO60830 172 aa11.2□□□□□ -0.62
HLA-F-216ENST00000259951 CKS1BP61024 79 aa11.19□□□□□ -0.62
HLA-F-216ENST00000259951 SRSF9Q13242 221 aaKnown RBP eCLIP11.19□□□□□ -0.62
HLA-F-216ENST00000259951 BATFQ16520 125 aa11.19□□□□□ -0.62
HLA-F-216ENST00000259951 KMT2CQ8NEZ4 4911 aaKnown RBP11.19□□□□□ -0.62
HLA-F-216ENST00000259951 HINT1P49773 126 aaPredicted RBP11.18□□□□□ -0.62
HLA-F-216ENST00000259951 TM2D2Q9BX73 214 aa11.18□□□□□ -0.62
HLA-F-216ENST00000259951 SPAG11BQ08648 103 aa11.17□□□□□ -0.62
HLA-F-216ENST00000259951 C3orf84H3BNL1 204 aa11.17□□□□□ -0.62
HLA-F-216ENST00000259951 KIAA0087Q14695 138 aa11.17□□□□□ -0.62
HLA-F-216ENST00000259951 DYNC2H1Q8NCM8 4307 aaKnown RBP11.16□□□□□ -0.62
HLA-F-216ENST00000259951 MEIG1Q5JSS6 88 aa11.16□□□□□ -0.62
HLA-F-216ENST00000259951 BVES-AS1Q5T3Y7 98 aa11.16□□□□□ -0.62
HLA-F-216ENST00000259951 Q6ZVH6 145 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms