RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 TCAPO15273 167 aa9.73□□□□□ -0.85
UPK3A-201ENST00000216211 PKIAP61925 76 aa9.73□□□□□ -0.85
UPK3A-201ENST00000216211 GAGE6Q13070 117 aa9.73□□□□□ -0.85
UPK3A-201ENST00000216211 TMEM97Q5BJF2 176 aa9.73□□□□□ -0.85
UPK3A-201ENST00000216211 CLPSL2Q6UWE3 100 aa9.73□□□□□ -0.85
UPK3A-201ENST00000216211 SDHAF1A6NFY7 115 aa9.72□□□□□ -0.85
UPK3A-201ENST00000216211 G0S2P27469 103 aa9.72□□□□□ -0.85
UPK3A-201ENST00000216211 RBX1P62877 108 aa9.72□□□□□ -0.85
UPK3A-201ENST00000216211 MIAQ16674 131 aa9.72□□□□□ -0.85
UPK3A-201ENST00000216211 IFI27L1Q96BM0 104 aa9.72□□□□□ -0.85
UPK3A-201ENST00000216211 TRBV25-1A0A075B6N4 114 aa9.71□□□□□ -0.86
UPK3A-201ENST00000216211 C20orf202A1L168 122 aa9.71□□□□□ -0.86
UPK3A-201ENST00000216211 PRSS1P07477 247 aa9.71□□□□□ -0.86
UPK3A-201ENST00000216211 LINC00269Q8N2A0 174 aa9.71□□□□□ -0.86
UPK3A-201ENST00000216211 ZNF664Q8N3J9 261 aa9.71□□□□□ -0.86
UPK3A-201ENST00000216211 PRR34Q9NV39 138 aa9.71□□□□□ -0.86
UPK3A-201ENST00000216211 LINC01549A6NIU2 74 aa9.7□□□□□ -0.86
UPK3A-201ENST00000216211 ATP5LO75964 103 aa9.7□□□□□ -0.86
UPK3A-201ENST00000216211 LINC01545Q5VT33 79 aa9.7□□□□□ -0.86
UPK3A-201ENST00000216211 TOMM6Q96B49 74 aa9.7□□□□□ -0.86
UPK3A-201ENST00000216211 KIR2DL4Q99706 377 aa9.7□□□□□ -0.86
UPK3A-201ENST00000216211 I3L3M4 83 aa9.69□□□□□ -0.86
UPK3A-201ENST00000216211 KRTAP26-1Q6PEX3 210 aa9.69□□□□□ -0.86
UPK3A-201ENST00000216211 PCP4L1A6NKN8 68 aa9.68□□□□□ -0.86
UPK3A-201ENST00000216211 VAMP8Q9BV40 100 aa9.68□□□□□ -0.86
UPK3A-201ENST00000216211 IGLV10-54A0A075B6I4 117 aa9.67□□□□□ -0.86
UPK3A-201ENST00000216211 DGAT2L7PQ6IED9 249 aa9.67□□□□□ -0.86
UPK3A-201ENST00000216211 TSTD3H0UI37 97 aa9.66□□□□□ -0.86
UPK3A-201ENST00000216211 TSHBP01222 138 aa9.66□□□□□ -0.86
UPK3A-201ENST00000216211 REG3AQ06141 175 aa9.66□□□□□ -0.86
UPK3A-201ENST00000216211 C2orf66Q6UXQ4 117 aa9.66□□□□□ -0.86
UPK3A-201ENST00000216211 C9orf163Q8N9P6 203 aa9.66□□□□□ -0.86
UPK3A-201ENST00000216211 HMCN2Q8NDA2 5059 aa9.66□□□□□ -0.86
UPK3A-201ENST00000216211 RPL37AP61513 92 aaKnown RBP9.65□□□□□ -0.86
UPK3A-201ENST00000216211 C20orf203Q8NBC4 194 aa9.65□□□□□ -0.86
UPK3A-201ENST00000216211 SCGB3A1Q96QR1 104 aa9.65□□□□□ -0.86
UPK3A-201ENST00000216211 PRO1933Q9H354 126 aa9.65□□□□□ -0.86
UPK3A-201ENST00000216211 CYSLTR1Q9Y271 337 aa9.65□□□□□ -0.86
UPK3A-201ENST00000216211 IGLV4-60A0A075B6I1 120 aa9.64□□□□□ -0.87
UPK3A-201ENST00000216211 H0Y8G0 127 aa9.64□□□□□ -0.87
UPK3A-201ENST00000216211 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.64□□□□□ -0.87
UPK3A-201ENST00000216211 ERASQ7Z444 233 aa9.64□□□□□ -0.87
UPK3A-201ENST00000216211 TMEM243Q9BU79 118 aa9.64□□□□□ -0.87
UPK3A-201ENST00000216211 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.64□□□□□ -0.87
UPK3A-201ENST00000216211 TRAV12-1A0A0B4J245 112 aa9.63□□□□□ -0.87
UPK3A-201ENST00000216211 PANO1I0J062 215 aa9.63□□□□□ -0.87
UPK3A-201ENST00000216211 OXTP01178 125 aa9.63□□□□□ -0.87
UPK3A-201ENST00000216211 SPATA45Q537H7 98 aa9.63□□□□□ -0.87
UPK3A-201ENST00000216211 ATOH7Q8N100 152 aa9.63□□□□□ -0.87
UPK3A-201ENST00000216211 PAM16Q9Y3D7 125 aa9.63□□□□□ -0.87
UPK3A-201ENST00000216211 A0A1B0GUV1 79 aa9.62□□□□□ -0.87
UPK3A-201ENST00000216211 IGIPA6NJ69 53 aa9.62□□□□□ -0.87
UPK3A-201ENST00000216211 HNRNPA3P51991 378 aaKnown RBP9.62□□□□□ -0.87
UPK3A-201ENST00000216211 ODF1Q14990 250 aa9.62□□□□□ -0.87
UPK3A-201ENST00000216211 Q6ZN92 141 aa9.62□□□□□ -0.87
UPK3A-201ENST00000216211 SDIM1Q6ZPB5 146 aa9.62□□□□□ -0.87
UPK3A-201ENST00000216211 TMEM141Q96I45 108 aa9.62□□□□□ -0.87
UPK3A-201ENST00000216211 TIMM17AQ99595 171 aa9.62□□□□□ -0.87
UPK3A-201ENST00000216211 TRAV8-4A0A0B4J246 113 aa9.61□□□□□ -0.87
UPK3A-201ENST00000216211 hDV102S1A0JD36 115 aa9.61□□□□□ -0.87
UPK3A-201ENST00000216211 PMCHL2Q9BQD1 86 aa9.61□□□□□ -0.87
UPK3A-201ENST00000216211 UBE2L6O14933 153 aa9.6□□□□□ -0.87
UPK3A-201ENST00000216211 MAJINQ3KP22 176 aa9.6□□□□□ -0.87
UPK3A-201ENST00000216211 HSBP1L1C9JCN9 74 aa9.59□□□□□ -0.87
UPK3A-201ENST00000216211 DDTP30046 118 aa9.59□□□□□ -0.87
UPK3A-201ENST00000216211 CNBPP62633 177 aaKnown RBP9.59□□□□□ -0.87
UPK3A-201ENST00000216211 RPL39P62891 51 aaKnown RBP9.59□□□□□ -0.87
UPK3A-201ENST00000216211 COTL1Q14019 142 aa9.59□□□□□ -0.87
UPK3A-201ENST00000216211 SERTAD4-AS1Q5TG53 156 aa9.59□□□□□ -0.87
UPK3A-201ENST00000216211 MIEN1Q9BRT3 115 aa9.59□□□□□ -0.87
UPK3A-201ENST00000216211 PYGO1Q9Y3Y4 419 aa9.59□□□□□ -0.87
UPK3A-201ENST00000216211 SLPIP03973 132 aa9.58□□□□□ -0.88
UPK3A-201ENST00000216211 NPSP0C0P6 89 aa9.58□□□□□ -0.88
UPK3A-201ENST00000216211 IGLC3P0DOY3 106 aa9.58□□□□□ -0.88
UPK3A-201ENST00000216211 IGHV3-64A0A075B6Q5 118 aa9.57□□□□□ -0.88
UPK3A-201ENST00000216211 LINC00587B1AMM8 73 aa9.57□□□□□ -0.88
UPK3A-201ENST00000216211 DPM2O94777 84 aa9.57□□□□□ -0.88
UPK3A-201ENST00000216211 IGKCP01834 107 aa9.57□□□□□ -0.88
UPK3A-201ENST00000216211 IGKV3OR2-268A0A0C4DH90 116 aa9.56□□□□□ -0.88
UPK3A-201ENST00000216211 F8VRH5 84 aa9.56□□□□□ -0.88
UPK3A-201ENST00000216211 CHTF8P0CG12 524 aa9.56□□□□□ -0.88
UPK3A-201ENST00000216211 CIRBPQ14011 172 aaKnown RBP9.56□□□□□ -0.88
UPK3A-201ENST00000216211 PMVKQ15126 192 aa9.56□□□□□ -0.88
UPK3A-201ENST00000216211 MRPL35Q9NZE8 188 aaKnown RBP9.56□□□□□ -0.88
UPK3A-201ENST00000216211 CHTOPQ9Y3Y2 248 aaKnown RBP9.56□□□□□ -0.88
UPK3A-201ENST00000216211 UBR4Q5T4S7 5183 aa9.55□□□□□ -0.88
UPK3A-201ENST00000216211 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.55□□□□□ -0.88
UPK3A-201ENST00000216211 GAGE12HA6NDE8 117 aa9.55□□□□□ -0.88
UPK3A-201ENST00000216211 PLNP26678 52 aa9.55□□□□□ -0.88
UPK3A-201ENST00000216211 C15orf56Q8N910 161 aa9.55□□□□□ -0.88
UPK3A-201ENST00000216211 DPH3Q96FX2 82 aa9.55□□□□□ -0.88
UPK3A-201ENST00000216211 CST9LQ9H4G1 147 aa9.55□□□□□ -0.88
UPK3A-201ENST00000216211 UQCR10Q9UDW1 63 aa9.55□□□□□ -0.88
UPK3A-201ENST00000216211 PAPPA-AS1Q5QFB9 102 aa9.54□□□□□ -0.88
UPK3A-201ENST00000216211 TIMM21Q9BVV7 248 aa9.54□□□□□ -0.88
UPK3A-201ENST00000216211 SPANXA1Q9NS26 97 aa9.54□□□□□ -0.88
UPK3A-201ENST00000216211 IGLV4-3A0A075B6K6 122 aa9.53□□□□□ -0.88
UPK3A-201ENST00000216211 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.53□□□□□ -0.88
UPK3A-201ENST00000216211 A0A087WYN8 130 aa9.53□□□□□ -0.88
UPK3A-201ENST00000216211 IGKV2-29A2NJV5 120 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms