RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 IGLV4-69A0A075B6H9 119 aa6.84□□□□□ -1.31
PHGDH-215ENST00000641371 TINCRA0A1B0GVN0 87 aa6.84□□□□□ -1.31
PHGDH-215ENST00000641371 FGF6P10767 208 aa6.84□□□□□ -1.31
PHGDH-215ENST00000641371 ANKRD39Q53RE8 183 aa6.84□□□□□ -1.31
PHGDH-215ENST00000641371 FAM19A3Q7Z5A8 133 aa6.84□□□□□ -1.31
PHGDH-215ENST00000641371 STPG4Q8N801 248 aa6.84□□□□□ -1.31
PHGDH-215ENST00000641371 ICOSQ9Y6W8 199 aa6.84□□□□□ -1.31
PHGDH-215ENST00000641371 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.83□□□□□ -1.32
PHGDH-215ENST00000641371 IGKV2-29A2NJV5 120 aaPredicted RBP6.83□□□□□ -1.32
PHGDH-215ENST00000641371 H3BRM9 83 aa6.83□□□□□ -1.32
PHGDH-215ENST00000641371 CCL25O15444 150 aa6.83□□□□□ -1.32
PHGDH-215ENST00000641371 NMUP48645 174 aa6.83□□□□□ -1.32
PHGDH-215ENST00000641371 TIRAPP58753 221 aa6.83□□□□□ -1.32
PHGDH-215ENST00000641371 HERVK_113P63121 156 aa6.83□□□□□ -1.32
PHGDH-215ENST00000641371 NTM-AS1Q6ZSK4 140 aa6.83□□□□□ -1.32
PHGDH-215ENST00000641371 CHAC1Q9BUX1 264 aa6.83□□□□□ -1.32
PHGDH-215ENST00000641371 HIGD1BQ9P298 99 aa6.83□□□□□ -1.32
PHGDH-215ENST00000641371 Q9UF83 564 aa6.83□□□□□ -1.32
PHGDH-215ENST00000641371 F5H768 121 aa6.82□□□□□ -1.32
PHGDH-215ENST00000641371 TMEM170BQ5T4T1 132 aa6.82□□□□□ -1.32
PHGDH-215ENST00000641371 PLEKHB2Q96CS7 222 aa6.82□□□□□ -1.32
PHGDH-215ENST00000641371 GEMIN7Q9H840 131 aaKnown RBP6.82□□□□□ -1.32
PHGDH-215ENST00000641371 A0A1B0GUV1 79 aa6.81□□□□□ -1.32
PHGDH-215ENST00000641371 CTAG1AP78358 180 aa6.81□□□□□ -1.32
PHGDH-215ENST00000641371 Q6ZUT4 128 aa6.81□□□□□ -1.32
PHGDH-215ENST00000641371 TM2D3Q9BRN9 247 aa6.81□□□□□ -1.32
PHGDH-215ENST00000641371 CHCHD5Q9BSY4 110 aa6.81□□□□□ -1.32
PHGDH-215ENST00000641371 CDC42SE2Q9NRR3 84 aa6.81□□□□□ -1.32
PHGDH-215ENST00000641371 CELA1Q9UNI1 258 aa6.81□□□□□ -1.32
PHGDH-215ENST00000641371 LOC100131303A0A0U1RQF7 123 aa6.8□□□□□ -1.32
PHGDH-215ENST00000641371 DEFB4AO15263 64 aa6.8□□□□□ -1.32
PHGDH-215ENST00000641371 UBE2D1P51668 147 aa6.8□□□□□ -1.32
PHGDH-215ENST00000641371 HSD52Q0P140 79 aa6.8□□□□□ -1.32
PHGDH-215ENST00000641371 TAL2Q16559 108 aa6.8□□□□□ -1.32
PHGDH-215ENST00000641371 C12orf74Q32Q52 190 aa6.8□□□□□ -1.32
PHGDH-215ENST00000641371 IGLV5-45A0A087WSX0 123 aa6.79□□□□□ -1.32
PHGDH-215ENST00000641371 MYMXA0A1B0GTQ4 84 aa6.79□□□□□ -1.32
PHGDH-215ENST00000641371 TMEM223A0PJW6 202 aa6.79□□□□□ -1.32
PHGDH-215ENST00000641371 K7EIL1 84 aa6.79□□□□□ -1.32
PHGDH-215ENST00000641371 LEPROTO15243 131 aa6.79□□□□□ -1.32
PHGDH-215ENST00000641371 ZNF22P17026 224 aaPredicted RBP6.79□□□□□ -1.32
PHGDH-215ENST00000641371 LELP1Q5T871 98 aa6.79□□□□□ -1.32
PHGDH-215ENST00000641371 DEFB104AQ8WTQ1 72 aa6.79□□□□□ -1.32
PHGDH-215ENST00000641371 VSIG2Q96IQ7 327 aa6.79□□□□□ -1.32
PHGDH-215ENST00000641371 TRAV8-6A0A0B4J262 113 aa6.78□□□□□ -1.32
PHGDH-215ENST00000641371 A0A0J9YXV3 536 aa6.78□□□□□ -1.32
PHGDH-215ENST00000641371 LGALS3P17931 250 aaKnown RBP6.78□□□□□ -1.32
PHGDH-215ENST00000641371 COL5A1-AS1Q5SY13 56 aa6.78□□□□□ -1.32
PHGDH-215ENST00000641371 C11orf45Q8TAV5 145 aa6.78□□□□□ -1.32
PHGDH-215ENST00000641371 FAM104AQ969W3 186 aa6.78□□□□□ -1.32
PHGDH-215ENST00000641371 OPRPNQ99935 248 aaPredicted RBP6.78□□□□□ -1.32
PHGDH-215ENST00000641371 IGKV2D-26A0A0A0MRZ7 120 aa6.77□□□□□ -1.33
PHGDH-215ENST00000641371 IGHV1-58A0A0C4DH39 117 aa6.77□□□□□ -1.33
PHGDH-215ENST00000641371 J3QQQ9 107 aa6.77□□□□□ -1.33
PHGDH-215ENST00000641371 HTN3P15516 51 aa6.77□□□□□ -1.33
PHGDH-215ENST00000641371 GAGE6Q13070 117 aa6.77□□□□□ -1.33
PHGDH-215ENST00000641371 DEFB121Q5J5C9 76 aa6.77□□□□□ -1.33
PHGDH-215ENST00000641371 CEMP1Q6PRD7 247 aaPredicted RBP6.77□□□□□ -1.33
PHGDH-215ENST00000641371 C2orf91Q6ZV80 131 aa6.77□□□□□ -1.33
PHGDH-215ENST00000641371 PCP2Q8IVA1 136 aa6.77□□□□□ -1.33
PHGDH-215ENST00000641371 LINC00469Q8N7U9 141 aa6.77□□□□□ -1.33
PHGDH-215ENST00000641371 C15orf53Q8NAA6 179 aa6.77□□□□□ -1.33
PHGDH-215ENST00000641371 SNHG12Q9BXW3 62 aa6.77□□□□□ -1.33
PHGDH-215ENST00000641371 TRAV10A0A0B4J240 114 aa6.76□□□□□ -1.33
PHGDH-215ENST00000641371 A0A0J9YWU9 116 aa6.76□□□□□ -1.33
PHGDH-215ENST00000641371 A0A0J9YY99 117 aa6.76□□□□□ -1.33
PHGDH-215ENST00000641371 ZNF815PA8K554 130 aa6.76□□□□□ -1.33
PHGDH-215ENST00000641371 SFTA2Q6UW10 78 aa6.76□□□□□ -1.33
PHGDH-215ENST00000641371 LINC01561Q8N1V8 128 aa6.76□□□□□ -1.33
PHGDH-215ENST00000641371 RETNQ9HD89 108 aa6.76□□□□□ -1.33
PHGDH-215ENST00000641371 A0A096LPF7 62 aa6.75□□□□□ -1.33
PHGDH-215ENST00000641371 A6NDN8 102 aa6.75□□□□□ -1.33
PHGDH-215ENST00000641371 TMEM262E9PQX1 116 aa6.75□□□□□ -1.33
PHGDH-215ENST00000641371 GCSHP23434 173 aa6.75□□□□□ -1.33
PHGDH-215ENST00000641371 SS18Q15532 418 aa6.75□□□□□ -1.33
PHGDH-215ENST00000641371 LINC00242Q5T6M2 205 aa6.75□□□□□ -1.33
PHGDH-215ENST00000641371 SCGB1D4Q6XE38 83 aa6.75□□□□□ -1.33
PHGDH-215ENST00000641371 NBEAL2Q6ZNJ1 2754 aa6.74□□□□□ -1.33
PHGDH-215ENST00000641371 DEFB131BA0A096LNP1 70 aa6.74□□□□□ -1.33
PHGDH-215ENST00000641371 TRAV13-1A0A0B4J241 112 aa6.74□□□□□ -1.33
PHGDH-215ENST00000641371 TMEM238LA0A1B0GVL6 79 aa6.74□□□□□ -1.33
PHGDH-215ENST00000641371 A6NJY4 79 aa6.74□□□□□ -1.33
PHGDH-215ENST00000641371 NHLRC4P0CG21 123 aaPredicted RBP6.74□□□□□ -1.33
PHGDH-215ENST00000641371 RBX1P62877 108 aa6.74□□□□□ -1.33
PHGDH-215ENST00000641371 BVES-AS1Q5T3Y7 98 aa6.74□□□□□ -1.33
PHGDH-215ENST00000641371 Q6ZTC4 211 aa6.74□□□□□ -1.33
PHGDH-215ENST00000641371 B9D2Q9BPU9 175 aa6.74□□□□□ -1.33
PHGDH-215ENST00000641371 SPANXB1Q9NS25 103 aaPredicted RBP6.74□□□□□ -1.33
PHGDH-215ENST00000641371 PKD1L1Q8TDX9 2849 aa6.74□□□□□ -1.33
PHGDH-215ENST00000641371 IGLV5-39A0A0G2JS06 123 aa6.73□□□□□ -1.33
PHGDH-215ENST00000641371 EREGO14944 169 aa6.73□□□□□ -1.33
PHGDH-215ENST00000641371 IGHV3-30-3P0DP02 117 aa6.73□□□□□ -1.33
PHGDH-215ENST00000641371 HINT1P49773 126 aaPredicted RBP6.73□□□□□ -1.33
PHGDH-215ENST00000641371 BATFQ16520 125 aa6.73□□□□□ -1.33
PHGDH-215ENST00000641371 MPV17L2Q567V2 206 aa6.73□□□□□ -1.33
PHGDH-215ENST00000641371 RNASE13Q5GAN3 156 aaKnown RBP6.73□□□□□ -1.33
PHGDH-215ENST00000641371 Q6ZVH6 145 aa6.73□□□□□ -1.33
PHGDH-215ENST00000641371 MRAPQ8TCY5 172 aa6.73□□□□□ -1.33
PHGDH-215ENST00000641371 ORAOV1Q8WV07 137 aa6.73□□□□□ -1.33
PHGDH-215ENST00000641371 COPS9Q8WXC6 57 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms