RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 SRCAPQ6ZRS2 3230 aa12.72□□□□□ -0.37
CACNA1A-253ENST00000637927 DSCAMO60469 2012 aa12.72□□□□□ -0.37
CACNA1A-253ENST00000637927 SBSPONQ8IVN8 264 aa12.72□□□□□ -0.37
CACNA1A-253ENST00000637927 C6orf99Q4VX62 202 aa12.71□□□□□ -0.37
CACNA1A-253ENST00000637927 SOSTDC1Q6X4U4 206 aa12.71□□□□□ -0.37
CACNA1A-253ENST00000637927 LINC01556Q5JQF7 62 aa12.71□□□□□ -0.37
CACNA1A-253ENST00000637927 DAZAP2Q15038 168 aaPredicted RBP12.71□□□□□ -0.37
CACNA1A-253ENST00000637927 PRORYQ9H606 182 aa12.71□□□□□ -0.37
CACNA1A-253ENST00000637927 CCDC140Q96MF4 163 aa12.71□□□□□ -0.37
CACNA1A-253ENST00000637927 FAM240AA0A1B0GVK7 77 aa12.7□□□□□ -0.38
CACNA1A-253ENST00000637927 NDUFC2-KCTD14E9PQ53 114 aa12.7□□□□□ -0.38
CACNA1A-253ENST00000637927 XGP55808 180 aa12.7□□□□□ -0.38
CACNA1A-253ENST00000637927 SYCNQ0VAF6 134 aa12.7□□□□□ -0.38
CACNA1A-253ENST00000637927 ZNF80P51504 273 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-253ENST00000637927 A0A0J9YX75 114 aa12.69□□□□□ -0.38
CACNA1A-253ENST00000637927 SPATA12Q7Z6I5 190 aa12.69□□□□□ -0.38
CACNA1A-253ENST00000637927 MALRD1Q5VYJ5 2156 aa12.69□□□□□ -0.38
CACNA1A-253ENST00000637927 A0A0J9YXY3 114 aa12.68□□□□□ -0.38
CACNA1A-253ENST00000637927 MIAQ16674 131 aa12.68□□□□□ -0.38
CACNA1A-253ENST00000637927 MT-ATP8P03928 68 aa12.68□□□□□ -0.38
CACNA1A-253ENST00000637927 Q9UF83 564 aa12.68□□□□□ -0.38
CACNA1A-253ENST00000637927 C1orf137Q5JT78 98 aa12.68□□□□□ -0.38
CACNA1A-253ENST00000637927 ZNF843Q8N446 348 aa12.67□□□□□ -0.38
CACNA1A-253ENST00000637927 CDKN2A-AS1Q9UH64 79 aa12.67□□□□□ -0.38
CACNA1A-253ENST00000637927 K7EMT4 169 aa12.67□□□□□ -0.38
CACNA1A-253ENST00000637927 NEXN-AS1Q8NBZ9 246 aa12.67□□□□□ -0.38
CACNA1A-253ENST00000637927 CEP192Q8TEP8 1941 aa12.67□□□□□ -0.38
CACNA1A-253ENST00000637927 TRAV10A0A0B4J240 114 aa12.66□□□□□ -0.38
CACNA1A-253ENST00000637927 H3BQ85 93 aa12.66□□□□□ -0.38
CACNA1A-253ENST00000637927 TRBV6-5A0A0K0K1A5 114 aa12.65□□□□□ -0.38
CACNA1A-253ENST00000637927 C9orf116Q5BN46 136 aaPredicted RBP12.65□□□□□ -0.38
CACNA1A-253ENST00000637927 TRBV7-6A0A0J9YX20 115 aa12.65□□□□□ -0.38
CACNA1A-253ENST00000637927 C10orf25Q5T742 122 aa12.65□□□□□ -0.38
CACNA1A-253ENST00000637927 Q6YL49 198 aa12.65□□□□□ -0.38
CACNA1A-253ENST00000637927 E9PLD3 99 aa12.65□□□□□ -0.38
CACNA1A-253ENST00000637927 LINC01545Q5VT33 79 aa12.65□□□□□ -0.39
CACNA1A-253ENST00000637927 IGLV1-47P01700 117 aa12.64□□□□□ -0.39
CACNA1A-253ENST00000637927 WNK1Q9H4A3 2382 aa12.63□□□□□ -0.39
CACNA1A-253ENST00000637927 V9GYY9 64 aa12.62□□□□□ -0.39
CACNA1A-253ENST00000637927 M0QXV9 152 aa12.62□□□□□ -0.39
CACNA1A-253ENST00000637927 PSPHP1O15172 72 aa12.62□□□□□ -0.39
CACNA1A-253ENST00000637927 CREBBPQ92793 2442 aa12.62□□□□□ -0.39
CACNA1A-253ENST00000637927 TET2Q6N021 2002 aaPredicted RBP12.62□□□□□ -0.39
CACNA1A-253ENST00000637927 IL15RAQ13261 267 aa12.62□□□□□ -0.39
CACNA1A-253ENST00000637927 C1orf229Q6ZS94 237 aaPredicted RBP12.62□□□□□ -0.39
CACNA1A-253ENST00000637927 LINC00322Q6ZN03 302 aaPredicted RBP12.62□□□□□ -0.39
CACNA1A-253ENST00000637927 PRR3P79522 188 aaKnown RBP12.61□□□□□ -0.39
CACNA1A-253ENST00000637927 LINC00337Q8N6G1 96 aa12.61□□□□□ -0.39
CACNA1A-253ENST00000637927 RNASE8Q8TDE3 154 aaKnown RBP12.61□□□□□ -0.39
CACNA1A-253ENST00000637927 FSHBP01225 129 aa12.61□□□□□ -0.39
CACNA1A-253ENST00000637927 ZNF706Q9Y5V0 76 aaPredicted RBP12.61□□□□□ -0.39
CACNA1A-253ENST00000637927 IGLV8-61A0A075B6I0 122 aa12.6□□□□□ -0.39
CACNA1A-253ENST00000637927 DEFB114Q30KQ6 69 aa12.6□□□□□ -0.39
CACNA1A-253ENST00000637927 SHISA2Q6UWI4 295 aa12.6□□□□□ -0.39
CACNA1A-253ENST00000637927 Q6ZQY7 126 aa12.6□□□□□ -0.39
CACNA1A-253ENST00000637927 TRBV6-8A0A0A6YYG3 113 aa12.59□□□□□ -0.39
CACNA1A-253ENST00000637927 CTRLP40313 264 aa12.59□□□□□ -0.39
CACNA1A-253ENST00000637927 LMO4P61968 165 aa12.59□□□□□ -0.39
CACNA1A-253ENST00000637927 SPANXDQ9BXN6 97 aa12.59□□□□□ -0.39
CACNA1A-253ENST00000637927 CRYGAP11844 174 aa12.59□□□□□ -0.39
CACNA1A-253ENST00000637927 ARHGAP32A7KAX9 2087 aa12.59□□□□□ -0.39
CACNA1A-253ENST00000637927 PCDH15Q96QU1 1955 aa12.59□□□□□ -0.39
CACNA1A-253ENST00000637927 CFAP126Q5VTH2 177 aa12.59□□□□□ -0.39
CACNA1A-253ENST00000637927 C6orf223Q8N319 242 aa12.58□□□□□ -0.4
CACNA1A-253ENST00000637927 IGKV2D-30A0A075B6S6 120 aa12.58□□□□□ -0.4
CACNA1A-253ENST00000637927 IGKV2-30P06310 120 aa12.58□□□□□ -0.4
CACNA1A-253ENST00000637927 C20orf203Q8NBC4 194 aa12.58□□□□□ -0.4
CACNA1A-253ENST00000637927 NDUFA7O95182 113 aa12.58□□□□□ -0.4
CACNA1A-253ENST00000637927 LYRM9A8MSI8 78 aa12.57□□□□□ -0.4
CACNA1A-253ENST00000637927 ZNF73O43830 326 aaPredicted RBP12.57□□□□□ -0.4
CACNA1A-253ENST00000637927 LOC107984640A0A0U1RRK4 108 aa12.57□□□□□ -0.4
CACNA1A-253ENST00000637927 COL4A4P53420 1690 aaPredicted RBP12.57□□□□□ -0.4
CACNA1A-253ENST00000637927 ATG2AQ2TAZ0 1938 aa12.57□□□□□ -0.4
CACNA1A-253ENST00000637927 TNFRSF13BO14836 293 aaPredicted RBP12.57□□□□□ -0.4
CACNA1A-253ENST00000637927 COA6Q5JTJ3 125 aaKnown RBP12.57□□□□□ -0.4
CACNA1A-253ENST00000637927 Q6ZSV7 163 aa12.57□□□□□ -0.4
CACNA1A-253ENST00000637927 IGLV4-69A0A075B6H9 119 aa12.57□□□□□ -0.4
CACNA1A-253ENST00000637927 EDN2P20800 178 aa12.56□□□□□ -0.4
CACNA1A-253ENST00000637927 PYGO1Q9Y3Y4 419 aa12.56□□□□□ -0.4
CACNA1A-253ENST00000637927 FAM208BQ5VWN6 2430 aa12.56□□□□□ -0.4
CACNA1A-253ENST00000637927 Q6ZS46 218 aa12.56□□□□□ -0.4
CACNA1A-253ENST00000637927 LINC00208Q96KT6 92 aa12.56□□□□□ -0.4
CACNA1A-253ENST00000637927 SPANXCQ9NY87 97 aa12.56□□□□□ -0.4
CACNA1A-253ENST00000637927 PCNX3Q9H6A9 2034 aa12.56□□□□□ -0.4
CACNA1A-253ENST00000637927 TRIAP1O43715 76 aa12.55□□□□□ -0.4
CACNA1A-253ENST00000637927 PTPRQQ9UMZ3 2332 aa12.55□□□□□ -0.4
CACNA1A-253ENST00000637927 PRRC2AP48634 2157 aaKnown RBP12.54□□□□□ -0.4
CACNA1A-253ENST00000637927 H3BT86 120 aa12.53□□□□□ -0.4
CACNA1A-253ENST00000637927 ODF3BA8MYP8 253 aa12.53□□□□□ -0.4
CACNA1A-253ENST00000637927 C7orf65Q6ZTY9 151 aa12.53□□□□□ -0.4
CACNA1A-253ENST00000637927 SMIM11BQ8TCY0 68 aa12.53□□□□□ -0.4
CACNA1A-253ENST00000637927 LINC01547P58512 204 aaPredicted RBP12.52□□□□□ -0.41
CACNA1A-253ENST00000637927 EBI3Q14213 229 aa12.51□□□□□ -0.41
CACNA1A-253ENST00000637927 Q6ZSR3 168 aa12.51□□□□□ -0.41
CACNA1A-253ENST00000637927 PMAIP1Q13794 54 aa12.51□□□□□ -0.41
CACNA1A-253ENST00000637927 SPANXB1Q9NS25 103 aaPredicted RBP12.51□□□□□ -0.41
CACNA1A-253ENST00000637927 SORL1Q92673 2214 aa12.51□□□□□ -0.41
CACNA1A-253ENST00000637927 LINC00308Q8TCZ7 52 aa12.51□□□□□ -0.41
CACNA1A-253ENST00000637927 HCFC1P51610 2035 aa12.51□□□□□ -0.41
CACNA1A-253ENST00000637927 LINC00643Q86TS7 51 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms