RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 PCOTHQ58A44 107 aa13.07□□□□□ -0.32
CACNA1A-215ENST00000635727 NUP210LQ5VU65 1888 aa13.07□□□□□ -0.32
CACNA1A-215ENST00000635727 LTBP1Q14766 1721 aa13.07□□□□□ -0.32
CACNA1A-215ENST00000635727 C19orf84I3L1E1 186 aa13.07□□□□□ -0.32
CACNA1A-215ENST00000635727 TRBV6-5A0A0K0K1A5 114 aa13.06□□□□□ -0.32
CACNA1A-215ENST00000635727 SPATA12Q7Z6I5 190 aa13.06□□□□□ -0.32
CACNA1A-215ENST00000635727 KPRPQ5T749 579 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-215ENST00000635727 SOSTDC1Q6X4U4 206 aa13.06□□□□□ -0.32
CACNA1A-215ENST00000635727 NEXN-AS1Q8NBZ9 246 aa13.06□□□□□ -0.32
CACNA1A-215ENST00000635727 RIF1Q5UIP0 2472 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-215ENST00000635727 DAZAP2Q15038 168 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-215ENST00000635727 INSL3P51460 131 aa13.05□□□□□ -0.32
CACNA1A-215ENST00000635727 TANC1Q9C0D5 1861 aa13.05□□□□□ -0.32
CACNA1A-215ENST00000635727 CACNA1HO95180 2353 aa13.05□□□□□ -0.32
CACNA1A-215ENST00000635727 ZNF80P51504 273 aaPredicted RBP13.05□□□□□ -0.32
CACNA1A-215ENST00000635727 C1orf147Q96MC9 270 aaPredicted RBP13.05□□□□□ -0.32
CACNA1A-215ENST00000635727 SIP14410 1827 aa13.05□□□□□ -0.32
CACNA1A-215ENST00000635727 LINC00643Q86TS7 51 aa13.04□□□□□ -0.32
CACNA1A-215ENST00000635727 CREBBPQ92793 2442 aa13.04□□□□□ -0.32
CACNA1A-215ENST00000635727 OTOGLQ3ZCN5 2332 aa13.04□□□□□ -0.32
CACNA1A-215ENST00000635727 C10orf25Q5T742 122 aa13.03□□□□□ -0.32
CACNA1A-215ENST00000635727 C20orf203Q8NBC4 194 aa13.03□□□□□ -0.32
CACNA1A-215ENST00000635727 SMR3AQ99954 134 aa13.03□□□□□ -0.32
CACNA1A-215ENST00000635727 PIP4P1Q86T03 277 aa13.03□□□□□ -0.32
CACNA1A-215ENST00000635727 AGRNO00468 2067 aa13.03□□□□□ -0.32
CACNA1A-215ENST00000635727 PDE6GP18545 87 aa13.03□□□□□ -0.32
CACNA1A-215ENST00000635727 WISP2O76076 250 aa13.03□□□□□ -0.32
CACNA1A-215ENST00000635727 BEAN1Q3B7T3 259 aa13.03□□□□□ -0.32
CACNA1A-215ENST00000635727 OXLD1Q5BKU9 147 aa13.03□□□□□ -0.32
CACNA1A-215ENST00000635727 TRBV7-6A0A0J9YX20 115 aa13.02□□□□□ -0.32
CACNA1A-215ENST00000635727 NCOR1P1Q9H4R4 102 aa13.02□□□□□ -0.32
CACNA1A-215ENST00000635727 ZNF706Q9Y5V0 76 aaPredicted RBP13.02□□□□□ -0.32
CACNA1A-215ENST00000635727 IGLV5-52A0A0A0MRZ9 124 aa13.02□□□□□ -0.33
CACNA1A-215ENST00000635727 COA6Q5JTJ3 125 aaKnown RBP13.02□□□□□ -0.33
CACNA1A-215ENST00000635727 TRAV10A0A0B4J240 114 aa13.01□□□□□ -0.33
CACNA1A-215ENST00000635727 TRBV6-8A0A0A6YYG3 113 aa13.01□□□□□ -0.33
CACNA1A-215ENST00000635727 H3BT86 120 aa13.01□□□□□ -0.33
CACNA1A-215ENST00000635727 K7EMT4 169 aa13.01□□□□□ -0.33
CACNA1A-215ENST00000635727 SBSPONQ8IVN8 264 aa13.01□□□□□ -0.33
CACNA1A-215ENST00000635727 LYRM9A8MSI8 78 aa13□□□□□ -0.33
CACNA1A-215ENST00000635727 FAM167A-AS1Q96KT0 104 aa13□□□□□ -0.33
CACNA1A-215ENST00000635727 CRIP2P52943 208 aaPredicted RBP13□□□□□ -0.33
CACNA1A-215ENST00000635727 PRLHP81277 87 aa12.99□□□□□ -0.33
CACNA1A-215ENST00000635727 TRIAP1O43715 76 aa12.99□□□□□ -0.33
CACNA1A-215ENST00000635727 CCDC140Q96MF4 163 aa12.99□□□□□ -0.33
CACNA1A-215ENST00000635727 ZNF843Q8N446 348 aa12.99□□□□□ -0.33
CACNA1A-215ENST00000635727 DEFB114Q30KQ6 69 aa12.99□□□□□ -0.33
CACNA1A-215ENST00000635727 CFAP126Q5VTH2 177 aa12.99□□□□□ -0.33
CACNA1A-215ENST00000635727 Q6ZQY7 126 aa12.99□□□□□ -0.33
CACNA1A-215ENST00000635727 CRIPAKQ8N1N5 446 aa12.98□□□□□ -0.33
CACNA1A-215ENST00000635727 LINC01556Q5JQF7 62 aa12.98□□□□□ -0.33
CACNA1A-215ENST00000635727 PSPHP1O15172 72 aa12.98□□□□□ -0.33
CACNA1A-215ENST00000635727 TECTAO75443 2155 aa12.98□□□□□ -0.33
CACNA1A-215ENST00000635727 SPG11Q96JI7 2443 aa12.97□□□□□ -0.33
CACNA1A-215ENST00000635727 SPANXB1Q9NS25 103 aaPredicted RBP12.97□□□□□ -0.33
CACNA1A-215ENST00000635727 CSPG4Q6UVK1 2322 aa12.97□□□□□ -0.33
CACNA1A-215ENST00000635727 THSD7BQ9C0I4 1608 aa12.97□□□□□ -0.33
CACNA1A-215ENST00000635727 C10orf91Q5T1B1 145 aa12.96□□□□□ -0.33
CACNA1A-215ENST00000635727 CTRLP40313 264 aa12.96□□□□□ -0.33
CACNA1A-215ENST00000635727 FAM19A3Q7Z5A8 133 aa12.96□□□□□ -0.33
CACNA1A-215ENST00000635727 LINC00322Q6ZN03 302 aaPredicted RBP12.96□□□□□ -0.34
CACNA1A-215ENST00000635727 BRI3O95415 125 aa12.96□□□□□ -0.34
CACNA1A-215ENST00000635727 PMAIP1Q13794 54 aa12.96□□□□□ -0.34
CACNA1A-215ENST00000635727 LINC00308Q8TCZ7 52 aa12.95□□□□□ -0.34
CACNA1A-215ENST00000635727 LOC107984640A0A0U1RRK4 108 aa12.95□□□□□ -0.34
CACNA1A-215ENST00000635727 M0QXV9 152 aa12.95□□□□□ -0.34
CACNA1A-215ENST00000635727 C9orf116Q5BN46 136 aaPredicted RBP12.95□□□□□ -0.34
CACNA1A-215ENST00000635727 C1orf195Q5TG92 126 aa12.94□□□□□ -0.34
CACNA1A-215ENST00000635727 C1orf137Q5JT78 98 aa12.94□□□□□ -0.34
CACNA1A-215ENST00000635727 Q6YL49 198 aa12.94□□□□□ -0.34
CACNA1A-215ENST00000635727 UQCRQO14949 82 aa12.94□□□□□ -0.34
CACNA1A-215ENST00000635727 SMIM11BQ8TCY0 68 aa12.94□□□□□ -0.34
CACNA1A-215ENST00000635727 IGLV4-3A0A075B6K6 122 aa12.93□□□□□ -0.34
CACNA1A-215ENST00000635727 LINC00208Q96KT6 92 aa12.93□□□□□ -0.34
CACNA1A-215ENST00000635727 Q9UF83 564 aa12.93□□□□□ -0.34
CACNA1A-215ENST00000635727 SHISA2Q6UWI4 295 aa12.93□□□□□ -0.34
CACNA1A-215ENST00000635727 PTPRQQ9UMZ3 2332 aa12.92□□□□□ -0.34
CACNA1A-215ENST00000635727 CRYGAP11844 174 aa12.92□□□□□ -0.34
CACNA1A-215ENST00000635727 MRPS12O15235 138 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-215ENST00000635727 PRR3P79522 188 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-215ENST00000635727 EBI3Q14213 229 aa12.92□□□□□ -0.34
CACNA1A-215ENST00000635727 MAPKAPK5-AS1Q8N8E1 139 aa12.91□□□□□ -0.34
CACNA1A-215ENST00000635727 HIGD1BQ9P298 99 aa12.91□□□□□ -0.34
CACNA1A-215ENST00000635727 IGLV4-69A0A075B6H9 119 aa12.9□□□□□ -0.34
CACNA1A-215ENST00000635727 LINC01547P58512 204 aaPredicted RBP12.89□□□□□ -0.35
CACNA1A-215ENST00000635727 M0R378 163 aa12.89□□□□□ -0.35
CACNA1A-215ENST00000635727 C6orf223Q8N319 242 aa12.89□□□□□ -0.35
CACNA1A-215ENST00000635727 NDUFA7O95182 113 aa12.88□□□□□ -0.35
CACNA1A-215ENST00000635727 Q6ZSV7 163 aa12.88□□□□□ -0.35
CACNA1A-215ENST00000635727 FSHBP01225 129 aa12.88□□□□□ -0.35
CACNA1A-215ENST00000635727 DHRS4-AS1Q9P1J3 65 aa12.88□□□□□ -0.35
CACNA1A-215ENST00000635727 CCDC179H3BU77 68 aa12.87□□□□□ -0.35
CACNA1A-215ENST00000635727 SRCAPQ6ZRS2 3230 aa12.87□□□□□ -0.35
CACNA1A-215ENST00000635727 SMIM9A6NGZ8 99 aa12.87□□□□□ -0.35
CACNA1A-215ENST00000635727 RBX1P62877 108 aa12.87□□□□□ -0.35
CACNA1A-215ENST00000635727 IGKV2D-30A0A075B6S6 120 aa12.86□□□□□ -0.35
CACNA1A-215ENST00000635727 IGKV2-30P06310 120 aa12.86□□□□□ -0.35
CACNA1A-215ENST00000635727 Q6ZSR3 168 aa12.86□□□□□ -0.35
CACNA1A-215ENST00000635727 ZNF22P17026 224 aaPredicted RBP12.86□□□□□ -0.35
CACNA1A-215ENST00000635727 LINC00337Q8N6G1 96 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms