RNA–Protein interactions for RNA: ENST00000629350.2

CDK7-215, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-215ENST00000629350 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.17□□□□□ -0.94
CDK7-215ENST00000629350 FAM231BA6NCW3 169 aa9.16□□□□□ -0.94
CDK7-215ENST00000629350 B5MCH6 92 aa9.16□□□□□ -0.94
CDK7-215ENST00000629350 PKIAP61925 76 aa9.16□□□□□ -0.94
CDK7-215ENST00000629350 COTL1Q14019 142 aa9.16□□□□□ -0.94
CDK7-215ENST00000629350 C15orf56Q8N910 161 aa9.16□□□□□ -0.94
CDK7-215ENST00000629350 ISOC2Q96AB3 205 aa9.16□□□□□ -0.94
CDK7-215ENST00000629350 RNF185Q96GF1 192 aa9.16□□□□□ -0.94
CDK7-215ENST00000629350 IGKV3OR2-268A0A0C4DH90 116 aa9.15□□□□□ -0.94
CDK7-215ENST00000629350 A0A1B0GUV1 79 aa9.15□□□□□ -0.94
CDK7-215ENST00000629350 SMKR1H3BMG3 65 aa9.15□□□□□ -0.94
CDK7-215ENST00000629350 NDUFA5Q16718 116 aa9.15□□□□□ -0.94
CDK7-215ENST00000629350 SEC11CQ9BY50 192 aa9.15□□□□□ -0.94
CDK7-215ENST00000629350 V9GYV3 84 aa9.15□□□□□ -0.94
CDK7-215ENST00000629350 SDHAF1A6NFY7 115 aa9.14□□□□□ -0.95
CDK7-215ENST00000629350 HIGD1CA8MV81 97 aa9.14□□□□□ -0.95
CDK7-215ENST00000629350 NCR2O95944 276 aa9.14□□□□□ -0.95
CDK7-215ENST00000629350 TSHBP01222 138 aa9.14□□□□□ -0.95
CDK7-215ENST00000629350 CHTF8P0CG12 524 aa9.14□□□□□ -0.95
CDK7-215ENST00000629350 C14orf177Q52M58 125 aa9.14□□□□□ -0.95
CDK7-215ENST00000629350 C9orf163Q8N9P6 203 aa9.14□□□□□ -0.95
CDK7-215ENST00000629350 TMEM242Q9NWH2 141 aa9.14□□□□□ -0.95
CDK7-215ENST00000629350 GAGE12HA6NDE8 117 aa9.13□□□□□ -0.95
CDK7-215ENST00000629350 A8MWL6 223 aa9.13□□□□□ -0.95
CDK7-215ENST00000629350 PNRC1Q12796 327 aaPredicted RBP9.13□□□□□ -0.95
CDK7-215ENST00000629350 SDIM1Q6ZPB5 146 aa9.13□□□□□ -0.95
CDK7-215ENST00000629350 TSKUQ8WUA8 353 aa9.13□□□□□ -0.95
CDK7-215ENST00000629350 KRTAP9-3Q9BYQ3 159 aa9.13□□□□□ -0.95
CDK7-215ENST00000629350 OSTCQ9NRP0 149 aa9.13□□□□□ -0.95
CDK7-215ENST00000629350 hDV102S1A0JD36 115 aa9.12□□□□□ -0.95
CDK7-215ENST00000629350 APOC3P02656 99 aa9.12□□□□□ -0.95
CDK7-215ENST00000629350 AMN1Q8IY45 258 aa9.12□□□□□ -0.95
CDK7-215ENST00000629350 TNXBP22105 4242 aa9.11□□□□□ -0.95
CDK7-215ENST00000629350 TRBV6-5A0A0K0K1A5 114 aa9.11□□□□□ -0.95
CDK7-215ENST00000629350 UBE2L6O14933 153 aa9.11□□□□□ -0.95
CDK7-215ENST00000629350 APCSP02743 223 aa9.11□□□□□ -0.95
CDK7-215ENST00000629350 FGF6P10767 208 aa9.11□□□□□ -0.95
CDK7-215ENST00000629350 CNBPP62633 177 aaKnown RBP9.11□□□□□ -0.95
CDK7-215ENST00000629350 NUP35Q8NFH5 326 aa9.11□□□□□ -0.95
CDK7-215ENST00000629350 CARHSP1Q9Y2V2 147 aaKnown RBP9.11□□□□□ -0.95
CDK7-215ENST00000629350 A0A1B0GUT8 65 aa9.1□□□□□ -0.95
CDK7-215ENST00000629350 MT-ND4LP03901 98 aa9.1□□□□□ -0.95
CDK7-215ENST00000629350 ESDP10768 282 aa9.1□□□□□ -0.95
CDK7-215ENST00000629350 RAB4AP20338 218 aa9.1□□□□□ -0.95
CDK7-215ENST00000629350 HIGD2BQ4VC39 106 aa9.1□□□□□ -0.95
CDK7-215ENST00000629350 C10orf91Q5T1B1 145 aa9.1□□□□□ -0.95
CDK7-215ENST00000629350 TRAV8-4A0A0B4J246 113 aa9.09□□□□□ -0.95
CDK7-215ENST00000629350 DGAT2L7PQ6IED9 249 aa9.09□□□□□ -0.95
CDK7-215ENST00000629350 RNASEKQ6P5S7 137 aaKnown RBP9.09□□□□□ -0.95
CDK7-215ENST00000629350 NRACQ8N912 160 aa9.09□□□□□ -0.95
CDK7-215ENST00000629350 CHCHD10Q8WYQ3 142 aaPredicted RBP9.09□□□□□ -0.95
CDK7-215ENST00000629350 TMEM191AQ9H0A3 160 aa9.09□□□□□ -0.95
CDK7-215ENST00000629350 PPP1R2P9O14990 202 aa9.08□□□□□ -0.96
CDK7-215ENST00000629350 POLR2KP53803 58 aaKnown RBP9.08□□□□□ -0.96
CDK7-215ENST00000629350 FOXI1Q12951 378 aa9.08□□□□□ -0.96
CDK7-215ENST00000629350 CIRBPQ14011 172 aaKnown RBP9.08□□□□□ -0.96
CDK7-215ENST00000629350 SMIM15Q7Z3B0 74 aa9.08□□□□□ -0.96
CDK7-215ENST00000629350 RPS10P5Q9NQ39 176 aa9.08□□□□□ -0.96
CDK7-215ENST00000629350 I3L3M4 83 aa9.07□□□□□ -0.96
CDK7-215ENST00000629350 AMMECR1LQ6DCA0 310 aa9.07□□□□□ -0.96
CDK7-215ENST00000629350 SVBPQ8N300 66 aa9.07□□□□□ -0.96
CDK7-215ENST00000629350 LINC00526Q96FQ7 95 aa9.07□□□□□ -0.96
CDK7-215ENST00000629350 KRTAP4-7Q9BYR0 210 aa9.07□□□□□ -0.96
CDK7-215ENST00000629350 C7orf77A4D0Y5 90 aa9.06□□□□□ -0.96
CDK7-215ENST00000629350 KRTAP29-1A8MX34 341 aaPredicted RBP9.06□□□□□ -0.96
CDK7-215ENST00000629350 SNAPINO95295 136 aa9.06□□□□□ -0.96
CDK7-215ENST00000629350 PMCHP20382 165 aa9.06□□□□□ -0.96
CDK7-215ENST00000629350 BORCS7Q96B45 105 aa9.06□□□□□ -0.96
CDK7-215ENST00000629350 ST20Q9HBF5 79 aa9.06□□□□□ -0.96
CDK7-215ENST00000629350 TRBV27A0A0K0K1C4 114 aa9.05□□□□□ -0.96
CDK7-215ENST00000629350 XCL1P47992 114 aa9.05□□□□□ -0.96
CDK7-215ENST00000629350 RPL37AP61513 92 aaKnown RBP9.05□□□□□ -0.96
CDK7-215ENST00000629350 MRPL51Q4U2R6 128 aaKnown RBP9.05□□□□□ -0.96
CDK7-215ENST00000629350 RNASE13Q5GAN3 156 aaKnown RBP9.05□□□□□ -0.96
CDK7-215ENST00000629350 SPACA4Q8TDM5 124 aa9.05□□□□□ -0.96
CDK7-215ENST00000629350 NAT8BQ9UHF3 227 aa9.05□□□□□ -0.96
CDK7-215ENST00000629350 SMIM27A0A1W2PRY6 76 aa9.04□□□□□ -0.96
CDK7-215ENST00000629350 RHEBQ15382 184 aa9.04□□□□□ -0.96
CDK7-215ENST00000629350 MRAP2Q96G30 205 aa9.04□□□□□ -0.96
CDK7-215ENST00000629350 IGHV3-64A0A075B6Q5 118 aa9.03□□□□□ -0.96
CDK7-215ENST00000629350 A0A087WYN8 130 aa9.03□□□□□ -0.96
CDK7-215ENST00000629350 GVQW2A0A096LPI5 108 aaPredicted RBP9.03□□□□□ -0.96
CDK7-215ENST00000629350 LINC00959A0A1B0GUT2 108 aa9.03□□□□□ -0.96
CDK7-215ENST00000629350 CCL25O15444 150 aa9.03□□□□□ -0.96
CDK7-215ENST00000629350 OR5A1Q8NGJ0 315 aa9.03□□□□□ -0.96
CDK7-215ENST00000629350 PRSS3P2Q8NHM4 247 aa9.03□□□□□ -0.96
CDK7-215ENST00000629350 FAM104AQ969W3 186 aa9.03□□□□□ -0.96
CDK7-215ENST00000629350 CTDSP1Q9GZU7 261 aa9.03□□□□□ -0.96
CDK7-215ENST00000629350 H7C423 109 aa9.02□□□□□ -0.97
CDK7-215ENST00000629350 CAMPP49913 170 aa9.02□□□□□ -0.97
CDK7-215ENST00000629350 COX6A2Q02221 97 aa9.02□□□□□ -0.97
CDK7-215ENST00000629350 MRPL54Q6P161 138 aaKnown RBP9.02□□□□□ -0.97
CDK7-215ENST00000629350 Q6ZUT4 128 aa9.02□□□□□ -0.97
CDK7-215ENST00000629350 MRPL52Q86TS9 123 aaKnown RBP9.02□□□□□ -0.97
CDK7-215ENST00000629350 CDC42SE2Q9NRR3 84 aa9.02□□□□□ -0.97
CDK7-215ENST00000629350 UBR4Q5T4S7 5183 aa9.02□□□□□ -0.97
CDK7-215ENST00000629350 A0A1B0GXF2 115 aa9.01□□□□□ -0.97
CDK7-215ENST00000629350 ZNF25P17030 456 aaPredicted RBP9.01□□□□□ -0.97
CDK7-215ENST00000629350 MALP21145 153 aa9.01□□□□□ -0.97
CDK7-215ENST00000629350 RIGQ13278 110 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms