RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 TMEM14DPA8MWL7 114 aa1.81□□□□□ -2.12
CNOT1-223ENST00000628857 H7C2G1 150 aa1.81□□□□□ -2.12
CNOT1-223ENST00000628857 PPYP01298 95 aa1.81□□□□□ -2.12
CNOT1-223ENST00000628857 CD24P25063 80 aa1.81□□□□□ -2.12
CNOT1-223ENST00000628857 UBE2D1P51668 147 aa1.81□□□□□ -2.12
CNOT1-223ENST00000628857 SNRPGP62308 76 aaKnown RBP1.81□□□□□ -2.12
CNOT1-223ENST00000628857 Q5VV11 94 aa1.81□□□□□ -2.12
CNOT1-223ENST00000628857 LYZL1Q6UWQ5 148 aa1.81□□□□□ -2.12
CNOT1-223ENST00000628857 LYZL2Q7Z4W2 148 aa1.81□□□□□ -2.12
CNOT1-223ENST00000628857 Q8N9W7 124 aa1.81□□□□□ -2.12
CNOT1-223ENST00000628857 C1orf64Q8NEQ6 169 aa1.81□□□□□ -2.12
CNOT1-223ENST00000628857 ZNF563Q8TA94 476 aa1.81□□□□□ -2.12
CNOT1-223ENST00000628857 TXNDC17Q9BRA2 123 aa1.81□□□□□ -2.12
CNOT1-223ENST00000628857 LCE3DQ9BYE3 92 aa1.81□□□□□ -2.12
CNOT1-223ENST00000628857 PSENENQ9NZ42 101 aa1.81□□□□□ -2.12
CNOT1-223ENST00000628857 U3KQK5 164 aa1.81□□□□□ -2.12
CNOT1-223ENST00000628857 DEPDC5O75140 1603 aa1.8□□□□□ -2.12
CNOT1-223ENST00000628857 IGKV1D-42A0A075B6H8 117 aa1.8□□□□□ -2.12
CNOT1-223ENST00000628857 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.8□□□□□ -2.12
CNOT1-223ENST00000628857 IGKV2D-24A0A075B6R9 120 aa1.8□□□□□ -2.12
CNOT1-223ENST00000628857 INSP01308 110 aa1.8□□□□□ -2.12
CNOT1-223ENST00000628857 TFF1P04155 84 aa1.8□□□□□ -2.12
CNOT1-223ENST00000628857 TLX1NBP0CAT3 122 aa1.8□□□□□ -2.12
CNOT1-223ENST00000628857 FCER1GP30273 86 aa1.8□□□□□ -2.12
CNOT1-223ENST00000628857 LINC00315P59091 139 aa1.8□□□□□ -2.12
CNOT1-223ENST00000628857 NNATQ16517 81 aa1.8□□□□□ -2.12
CNOT1-223ENST00000628857 SPANXN5Q5MJ07 72 aa1.8□□□□□ -2.12
CNOT1-223ENST00000628857 Q6ZQT0 140 aa1.8□□□□□ -2.12
CNOT1-223ENST00000628857 TMEM254Q8TBM7 123 aa1.8□□□□□ -2.12
CNOT1-223ENST00000628857 CIRBP-AS1Q8TBR5 109 aa1.8□□□□□ -2.12
CNOT1-223ENST00000628857 RPP21Q9H633 154 aaKnown RBP1.8□□□□□ -2.12
CNOT1-223ENST00000628857 TMEM14BQ9NUH8 114 aa1.8□□□□□ -2.12
CNOT1-223ENST00000628857 UBE2D4Q9Y2X8 147 aa1.8□□□□□ -2.12
CNOT1-223ENST00000628857 SLIT1O75093 1534 aa1.8□□□□□ -2.12
CNOT1-223ENST00000628857 LRP6O75581 1613 aa1.8□□□□□ -2.12
CNOT1-223ENST00000628857 NRAPQ86VF7 1730 aa1.8□□□□□ -2.12
CNOT1-223ENST00000628857 SPTBP11277 2137 aa1.79□□□□□ -2.12
CNOT1-223ENST00000628857 IGLV4-69A0A075B6H9 119 aa1.79□□□□□ -2.12
CNOT1-223ENST00000628857 IGKV2-28A0A075B6P5 120 aa1.79□□□□□ -2.12
CNOT1-223ENST00000628857 TRAV12-3A0A0B4J271 114 aa1.79□□□□□ -2.12
CNOT1-223ENST00000628857 D6R8Y8 96 aa1.79□□□□□ -2.12
CNOT1-223ENST00000628857 H3BPC8 53 aa1.79□□□□□ -2.12
CNOT1-223ENST00000628857 IGKV2D-28P01615 120 aa1.79□□□□□ -2.12
CNOT1-223ENST00000628857 CLPSP04118 112 aa1.79□□□□□ -2.12
CNOT1-223ENST00000628857 KRTAP10-1P60331 282 aa1.79□□□□□ -2.12
CNOT1-223ENST00000628857 MOBPQ13875 183 aa1.79□□□□□ -2.12
CNOT1-223ENST00000628857 PP632Q6XCG6 107 aa1.79□□□□□ -2.12
CNOT1-223ENST00000628857 NTM-AS1Q6ZSK4 140 aa1.79□□□□□ -2.12
CNOT1-223ENST00000628857 MUSTN1Q8IVN3 82 aa1.79□□□□□ -2.12
CNOT1-223ENST00000628857 MIR7-3HGQ8N6C7 128 aa1.79□□□□□ -2.12
CNOT1-223ENST00000628857 MUC7Q8TAX7 377 aa1.79□□□□□ -2.12
CNOT1-223ENST00000628857 LINC01560Q8TB33 94 aa1.79□□□□□ -2.12
CNOT1-223ENST00000628857 ZNRD1Q9P1U0 126 aa1.79□□□□□ -2.12
CNOT1-223ENST00000628857 LTBP4Q8N2S1 1624 aa1.79□□□□□ -2.12
CNOT1-223ENST00000628857 HEATR5BQ9P2D3 2071 aa1.79□□□□□ -2.12
CNOT1-223ENST00000628857 SDK2Q58EX2 2172 aa1.79□□□□□ -2.12
CNOT1-223ENST00000628857 DIDO1Q9BTC0 2240 aaKnown RBP1.79□□□□□ -2.12
CNOT1-223ENST00000628857 MALRD1Q5VYJ5 2156 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 ZGRF1Q86YA3 2104 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 A0A0G2JMZ2 1700 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 LRRC37A2A6NM11 1700 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 LRRC37AA6NMS7 1700 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 LMO7Q8WWI1 1683 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 DUOX1Q9NRD9 1551 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 IGLV4-60A0A075B6I1 120 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 IGKV1D-37A0A075B6S9 117 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 TRBV6-8A0A0A6YYG3 113 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 IGHV3-64DA0A0J9YX35 117 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 TRBV30A0A0K0K1B3 111 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 C17orf98A8MV24 154 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 DNAL4O96015 105 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 LHBP01229 141 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 ARMS2P0C7Q2 107 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 SAA2P0DJI9 122 aaPredicted RBP1.78□□□□□ -2.12
CNOT1-223ENST00000628857 S100A3P33764 101 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 SERF2P84101 59 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 MIR22HGQ0VDD5 57 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 Q6ZS52 159 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 LYPD6Q86Y78 171 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 KLF14Q8TD94 323 aaPredicted RBP1.78□□□□□ -2.12
CNOT1-223ENST00000628857 CDC42SE2Q9NRR3 84 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 C22orf24Q9Y442 160 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 FAM215AQ9Y5M1 114 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 TMEM14AQ9Y6G1 99 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 S4R3C0 116 aa1.78□□□□□ -2.12
CNOT1-223ENST00000628857 DOT1LQ8TEK3 1739 aa1.77□□□□□ -2.13
CNOT1-223ENST00000628857 MED13Q9UHV7 2174 aa1.77□□□□□ -2.13
CNOT1-223ENST00000628857 IGKV1OR2-108A0A075B7D4 117 aa1.77□□□□□ -2.13
CNOT1-223ENST00000628857 A0A087WSZ3 146 aa1.77□□□□□ -2.13
CNOT1-223ENST00000628857 TRAV10A0A0B4J240 114 aa1.77□□□□□ -2.13
CNOT1-223ENST00000628857 LRCOL1A6NCL2 159 aa1.77□□□□□ -2.13
CNOT1-223ENST00000628857 C11orf86A6NJI1 115 aa1.77□□□□□ -2.13
CNOT1-223ENST00000628857 HMGN4O00479 90 aa1.77□□□□□ -2.13
CNOT1-223ENST00000628857 PSCAO43653 123 aa1.77□□□□□ -2.13
CNOT1-223ENST00000628857 IFI6P09912 130 aa1.77□□□□□ -2.13
CNOT1-223ENST00000628857 BAALC-AS2P0C853 105 aa1.77□□□□□ -2.13
CNOT1-223ENST00000628857 PI4KAP42356 2102 aa1.77□□□□□ -2.13
CNOT1-223ENST00000628857 KRTAP10-10P60014 251 aa1.77□□□□□ -2.13
CNOT1-223ENST00000628857 EIF4EBP1Q13541 118 aaPredicted RBP1.77□□□□□ -2.13
CNOT1-223ENST00000628857 GDF5OSQ5U4N7 250 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms