RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 TMEM126AQ9H061 195 aa1.2□□□□□ -2.22
SCARNA4.1-201ENST00000628597 FXYD6Q9H0Q3 95 aa1.2□□□□□ -2.22
SCARNA4.1-201ENST00000628597 MBD2Q9UBB5 411 aa1.2□□□□□ -2.22
SCARNA4.1-201ENST00000628597 IGKV3D-20A0A0C4DH25 116 aa1.19□□□□□ -2.22
SCARNA4.1-201ENST00000628597 B3GALNT1O75752 331 aa1.19□□□□□ -2.22
SCARNA4.1-201ENST00000628597 GCGP01275 180 aa1.19□□□□□ -2.22
SCARNA4.1-201ENST00000628597 NBEAP1P0C6P0 100 aa1.19□□□□□ -2.22
SCARNA4.1-201ENST00000628597 FGF7P21781 194 aa1.19□□□□□ -2.22
SCARNA4.1-201ENST00000628597 POLR2IP36954 125 aaKnown RBP1.19□□□□□ -2.22
SCARNA4.1-201ENST00000628597 TAS2R46P59540 309 aa1.19□□□□□ -2.22
SCARNA4.1-201ENST00000628597 NCS1P62166 190 aa1.19□□□□□ -2.22
SCARNA4.1-201ENST00000628597 SLC38A11Q08AI6 406 aa1.19□□□□□ -2.22
SCARNA4.1-201ENST00000628597 LINC00483Q53H64 154 aa1.19□□□□□ -2.22
SCARNA4.1-201ENST00000628597 CST9LP1Q5W188 147 aa1.19□□□□□ -2.22
SCARNA4.1-201ENST00000628597 KRTAP19-3Q7Z4W3 81 aa1.19□□□□□ -2.22
SCARNA4.1-201ENST00000628597 NRARPQ7Z6K4 114 aa1.19□□□□□ -2.22
SCARNA4.1-201ENST00000628597 CMTM2Q8TAZ6 248 aa1.19□□□□□ -2.22
SCARNA4.1-201ENST00000628597 OBSCN-AS1Q96MR7 158 aa1.19□□□□□ -2.22
SCARNA4.1-201ENST00000628597 FAM218AQ96MZ4 157 aa1.19□□□□□ -2.22
SCARNA4.1-201ENST00000628597 PFDN5Q99471 154 aa1.19□□□□□ -2.22
SCARNA4.1-201ENST00000628597 ALKBH7Q9BT30 221 aaPredicted RBP1.19□□□□□ -2.22
SCARNA4.1-201ENST00000628597 TMEM14CQ9P0S9 112 aa1.19□□□□□ -2.22
SCARNA4.1-201ENST00000628597 COPZ2Q9P299 210 aa1.19□□□□□ -2.22
SCARNA4.1-201ENST00000628597 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 A0A1W2PNM2 257 aa1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 IRGMA1A4Y4 181 aa1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 IGKV2-29A2NJV5 120 aaPredicted RBP1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 TMEM238C9JI98 176 aa1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 K7EQM0 130 aa1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 ARL6IP5O75915 188 aa1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 PYYP10082 97 aa1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 IAPPP10997 89 aa1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 RCVRNP35243 200 aa1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 DEFA1P59665 94 aa1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 RANP62826 216 aaKnown RBP1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 WHAMMP3Q1A5X7 153 aa1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 Q1RN00 199 aa1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 LRRC37A5PQ49AS3 106 aa1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 SPANXN5Q5MJ07 72 aa1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 C1orf195Q5TG92 126 aa1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 OR5C1Q8NGR4 320 aa1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 SMCR5Q8TEV8 140 aa1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 CCDC124Q96CT7 223 aaKnown RBP1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 HYLS1Q96M11 299 aa1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 CIB3Q96Q77 187 aaPredicted RBP1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 PYGO1Q9Y3Y4 419 aa1.18□□□□□ -2.22
SCARNA4.1-201ENST00000628597 TRAV18A0A075B6X5 111 aa1.17□□□□□ -2.22
SCARNA4.1-201ENST00000628597 B4DEV8 164 aa1.17□□□□□ -2.22
SCARNA4.1-201ENST00000628597 MED6O75586 246 aa1.17□□□□□ -2.22
SCARNA4.1-201ENST00000628597 UCHL1P09936 223 aa1.17□□□□□ -2.22
SCARNA4.1-201ENST00000628597 OR5AL1P0C617 328 aa1.17□□□□□ -2.22
SCARNA4.1-201ENST00000628597 KRTAP10-12P60413 245 aa1.17□□□□□ -2.22
SCARNA4.1-201ENST00000628597 RRAS2P62070 204 aaPredicted RBP1.17□□□□□ -2.22
SCARNA4.1-201ENST00000628597 RIGQ13278 110 aa1.17□□□□□ -2.22
SCARNA4.1-201ENST00000628597 SMUG1Q53HV7 270 aa1.17□□□□□ -2.22
SCARNA4.1-201ENST00000628597 FAM74A1Q5RGS3 127 aa1.17□□□□□ -2.22
SCARNA4.1-201ENST00000628597 SOSTDC1Q6X4U4 206 aa1.17□□□□□ -2.22
SCARNA4.1-201ENST00000628597 GOLT1AQ6ZVE7 132 aa1.17□□□□□ -2.22
SCARNA4.1-201ENST00000628597 SELENOHQ8IZQ5 122 aaKnown RBP1.17□□□□□ -2.22
SCARNA4.1-201ENST00000628597 ZNF486Q96H40 463 aaPredicted RBP1.17□□□□□ -2.22
SCARNA4.1-201ENST00000628597 Q96NJ1 140 aa1.17□□□□□ -2.22
SCARNA4.1-201ENST00000628597 STRAPQ9Y3F4 350 aaKnown RBP1.17□□□□□ -2.22
SCARNA4.1-201ENST00000628597 OBSCNQ5VST9 7968 aa1.17□□□□□ -2.22
SCARNA4.1-201ENST00000628597 TRAV13-1A0A0B4J241 112 aa1.16□□□□□ -2.22
SCARNA4.1-201ENST00000628597 GRIFINA4D1Z8 144 aa1.16□□□□□ -2.22
SCARNA4.1-201ENST00000628597 M0R378 163 aa1.16□□□□□ -2.22
SCARNA4.1-201ENST00000628597 PDCD5O14737 125 aa1.16□□□□□ -2.22
SCARNA4.1-201ENST00000628597 APCSP02743 223 aa1.16□□□□□ -2.22
SCARNA4.1-201ENST00000628597 MAGOHP61326 146 aaKnown RBP1.16□□□□□ -2.22
SCARNA4.1-201ENST00000628597 SMCO1Q147U7 214 aa1.16□□□□□ -2.22
SCARNA4.1-201ENST00000628597 KRTAP5-11Q6L8G4 156 aa1.16□□□□□ -2.22
SCARNA4.1-201ENST00000628597 PP632Q6XCG6 107 aa1.16□□□□□ -2.22
SCARNA4.1-201ENST00000628597 CROCCP2Q86T23 111 aa1.16□□□□□ -2.22
SCARNA4.1-201ENST00000628597 ZNF471Q9BX82 626 aaPredicted RBP1.16□□□□□ -2.22
SCARNA4.1-201ENST00000628597 IFITM5A6NNB3 132 aa1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 FABP5P3A8MUU1 101 aa1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 KRTAP16-1A8MUX0 517 aa1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 H0YAA0 97 aa1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 H7C2G1 150 aa1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 MYL12BO14950 172 aa1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 NCR2O95944 276 aa1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 MGPP08493 103 aa1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 TMBIM6P55061 237 aa1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 FOXA3P55318 350 aaPredicted RBP1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 C2orf82Q6UX34 121 aa1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 TMEM136Q6ZRR5 245 aa1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 SPATA24Q86W54 205 aa1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 AP3S1Q92572 193 aa1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 PRAC1Q96KF2 57 aa1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 GABARAPL3Q9BY60 117 aa1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 CDC42SE2Q9NRR3 84 aa1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 MED9Q9NWA0 146 aa1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 CCDC59Q9P031 241 aaKnown RBP1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 RSL24D1Q9UHA3 163 aaKnown RBP1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 ORC6Q9Y5N6 252 aa1.15□□□□□ -2.23
SCARNA4.1-201ENST00000628597 EFCAB10A6NFE3 127 aa1.14□□□□□ -2.23
SCARNA4.1-201ENST00000628597 A8MWL6 223 aa1.14□□□□□ -2.23
SCARNA4.1-201ENST00000628597 M0QY20 66 aa1.14□□□□□ -2.23
SCARNA4.1-201ENST00000628597 CAMLGP49069 296 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms