RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 GAGE12JA6NER3 117 aa14.38□□□□□ -0.11
SDHA-220ENST00000617470 GAGE1Q13065 139 aa14.38□□□□□ -0.11
SDHA-220ENST00000617470 GAGE4Q13068 117 aa14.38□□□□□ -0.11
SDHA-220ENST00000617470 GAGE5Q13069 117 aa14.38□□□□□ -0.11
SDHA-220ENST00000617470 GAGE13Q4V321 117 aa14.38□□□□□ -0.11
SDHA-220ENST00000617470 HINT1P49773 126 aaPredicted RBP14.38□□□□□ -0.11
SDHA-220ENST00000617470 NTM-AS1Q6ZSK4 140 aa14.38□□□□□ -0.11
SDHA-220ENST00000617470 UBE2D4Q9Y2X8 147 aa14.38□□□□□ -0.11
SDHA-220ENST00000617470 TRGV4A0A0C4DH28 118 aa14.37□□□□□ -0.11
SDHA-220ENST00000617470 NANOS2P60321 138 aaKnown RBP14.37□□□□□ -0.11
SDHA-220ENST00000617470 DAZ4Q86SG3 579 aaKnown RBP14.36□□□□□ -0.11
SDHA-220ENST00000617470 AMELXQ99217 191 aa14.36□□□□□ -0.11
SDHA-220ENST00000617470 DAZ3Q9NR90 486 aaKnown RBP14.36□□□□□ -0.11
SDHA-220ENST00000617470 STAB2Q8WWQ8 2551 aa14.36□□□□□ -0.11
SDHA-220ENST00000617470 MPV17L2Q567V2 206 aa14.36□□□□□ -0.11
SDHA-220ENST00000617470 C12orf74Q32Q52 190 aa14.35□□□□□ -0.11
SDHA-220ENST00000617470 MAPKAPK5-AS1Q8N8E1 139 aa14.35□□□□□ -0.11
SDHA-220ENST00000617470 TGP01266 2768 aa14.35□□□□□ -0.11
SDHA-220ENST00000617470 VCX2Q9H322 139 aa14.34□□□□□ -0.11
SDHA-220ENST00000617470 SPANXA1Q9NS26 97 aa14.34□□□□□ -0.11
SDHA-220ENST00000617470 ZNF25P17030 456 aaPredicted RBP14.33□□□□□ -0.12
SDHA-220ENST00000617470 NFE4Q86UQ8 179 aa14.33□□□□□ -0.12
SDHA-220ENST00000617470 NPSP0C0P6 89 aa14.33□□□□□ -0.12
SDHA-220ENST00000617470 LINC00694P0DN24 101 aa14.33□□□□□ -0.12
SDHA-220ENST00000617470 HTN3P15516 51 aa14.33□□□□□ -0.12
SDHA-220ENST00000617470 RNASE13Q5GAN3 156 aaKnown RBP14.33□□□□□ -0.12
SDHA-220ENST00000617470 PAPPA-AS1Q5QFB9 102 aa14.33□□□□□ -0.12
SDHA-220ENST00000617470 Q6ZTC4 211 aa14.33□□□□□ -0.12
SDHA-220ENST00000617470 E9PLD3 99 aa14.32□□□□□ -0.12
SDHA-220ENST00000617470 SIVA1O15304 175 aa14.32□□□□□ -0.12
SDHA-220ENST00000617470 CRYBA4P53673 196 aa14.32□□□□□ -0.12
SDHA-220ENST00000617470 TRAV8-6A0A0B4J262 113 aa14.31□□□□□ -0.12
SDHA-220ENST00000617470 Q6ZUT4 128 aa14.31□□□□□ -0.12
SDHA-220ENST00000617470 A0A0J9YXV3 536 aa14.31□□□□□ -0.12
SDHA-220ENST00000617470 BVES-AS1Q5T3Y7 98 aa14.31□□□□□ -0.12
SDHA-220ENST00000617470 PRADC1Q9BSG0 188 aa14.3□□□□□ -0.12
SDHA-220ENST00000617470 CHAC1Q9BUX1 264 aa14.3□□□□□ -0.12
SDHA-220ENST00000617470 TIMM21Q9BVV7 248 aa14.3□□□□□ -0.12
SDHA-220ENST00000617470 ATP5G1P05496 136 aa14.29□□□□□ -0.12
SDHA-220ENST00000617470 GTSF1LQ9H1H1 148 aa14.29□□□□□ -0.12
SDHA-220ENST00000617470 TRBV25-1A0A075B6N4 114 aa14.28□□□□□ -0.12
SDHA-220ENST00000617470 MRPS36P82909 103 aaKnown RBP14.27□□□□□ -0.12
SDHA-220ENST00000617470 TMEM97Q5BJF2 176 aa14.27□□□□□ -0.12
SDHA-220ENST00000617470 TMEM170BQ5T4T1 132 aa14.27□□□□□ -0.12
SDHA-220ENST00000617470 F5H768 121 aa14.27□□□□□ -0.13
SDHA-220ENST00000617470 ZNF22P17026 224 aaPredicted RBP14.27□□□□□ -0.13
SDHA-220ENST00000617470 HIGD1BQ9P298 99 aa14.27□□□□□ -0.13
SDHA-220ENST00000617470 DEFB131BA0A096LNP1 70 aa14.25□□□□□ -0.13
SDHA-220ENST00000617470 TMEM223A0PJW6 202 aa14.24□□□□□ -0.13
SDHA-220ENST00000617470 TSPEAR-AS2P59090 65 aa14.24□□□□□ -0.13
SDHA-220ENST00000617470 PRO0255Q9UI72 69 aa14.24□□□□□ -0.13
SDHA-220ENST00000617470 CSDC2Q9Y534 153 aaKnown RBP14.24□□□□□ -0.13
SDHA-220ENST00000617470 TRAV10A0A0B4J240 114 aa14.23□□□□□ -0.13
SDHA-220ENST00000617470 MYMXA0A1B0GTQ4 84 aa14.23□□□□□ -0.13
SDHA-220ENST00000617470 TMEM243Q9BU79 118 aa14.23□□□□□ -0.13
SDHA-220ENST00000617470 GYPEP15421 78 aa14.23□□□□□ -0.13
SDHA-220ENST00000617470 HSD52Q0P140 79 aa14.23□□□□□ -0.13
SDHA-220ENST00000617470 UBE2D1P51668 147 aa14.22□□□□□ -0.13
SDHA-220ENST00000617470 HERVK_113P61574 105 aa14.22□□□□□ -0.13
SDHA-220ENST00000617470 DGAT2L7PQ6IED9 249 aa14.22□□□□□ -0.13
SDHA-220ENST00000617470 ORAOV1Q8WV07 137 aa14.22□□□□□ -0.13
SDHA-220ENST00000617470 WWC2-AS2Q96NR7 200 aa14.22□□□□□ -0.13
SDHA-220ENST00000617470 COX11Q9Y6N1 276 aa14.22□□□□□ -0.13
SDHA-220ENST00000617470 TRBV6-8A0A0A6YYG3 113 aa14.21□□□□□ -0.13
SDHA-220ENST00000617470 VSIG2Q96IQ7 327 aa14.21□□□□□ -0.13
SDHA-220ENST00000617470 TINCRA0A1B0GVN0 87 aa14.2□□□□□ -0.14
SDHA-220ENST00000617470 Q6ZVH6 145 aa14.2□□□□□ -0.14
SDHA-220ENST00000617470 CDC42SE2Q9NRR3 84 aa14.2□□□□□ -0.14
SDHA-220ENST00000617470 A0A0J9YY99 117 aa14.2□□□□□ -0.14
SDHA-220ENST00000617470 TRAV26-1A0A087WT03 109 aa14.18□□□□□ -0.14
SDHA-220ENST00000617470 ZNF815PA8K554 130 aa14.18□□□□□ -0.14
SDHA-220ENST00000617470 ATP6V0E2Q8NHE4 81 aa14.18□□□□□ -0.14
SDHA-220ENST00000617470 H7C423 109 aa14.18□□□□□ -0.14
SDHA-220ENST00000617470 PAX4O43316 350 aa14.18□□□□□ -0.14
SDHA-220ENST00000617470 ZFAND6Q6FIF0 208 aa14.18□□□□□ -0.14
SDHA-220ENST00000617470 PLEKHB2Q96CS7 222 aa14.18□□□□□ -0.14
SDHA-220ENST00000617470 J3QQQ9 107 aa14.17□□□□□ -0.14
SDHA-220ENST00000617470 UBE2L6O14933 153 aa14.17□□□□□ -0.14
SDHA-220ENST00000617470 LEPROTO15243 131 aa14.17□□□□□ -0.14
SDHA-220ENST00000617470 OR5A1Q8NGJ0 315 aa14.17□□□□□ -0.14
SDHA-220ENST00000617470 MUC7Q8TAX7 377 aa14.17□□□□□ -0.14
SDHA-220ENST00000617470 IGHV3-64A0A075B6Q5 118 aa14.16□□□□□ -0.14
SDHA-220ENST00000617470 GAGE6Q13070 117 aa14.16□□□□□ -0.14
SDHA-220ENST00000617470 IGLL5B9A064 214 aa14.16□□□□□ -0.14
SDHA-220ENST00000617470 TAX1BP3O14907 124 aa14.16□□□□□ -0.14
SDHA-220ENST00000617470 COX6A2Q02221 97 aa14.16□□□□□ -0.14
SDHA-220ENST00000617470 AMMECR1LQ6DCA0 310 aa14.16□□□□□ -0.14
SDHA-220ENST00000617470 IGLV5-45A0A087WSX0 123 aa14.15□□□□□ -0.14
SDHA-220ENST00000617470 SEC11AP67812 179 aa14.15□□□□□ -0.14
SDHA-220ENST00000617470 LINC00242Q5T6M2 205 aa14.15□□□□□ -0.14
SDHA-220ENST00000617470 FAM19A3Q7Z5A8 133 aa14.15□□□□□ -0.14
SDHA-220ENST00000617470 K7EP13 123 aa14.14□□□□□ -0.15
SDHA-220ENST00000617470 TIRAPP58753 221 aa14.14□□□□□ -0.15
SDHA-220ENST00000617470 DNAH7Q8WXX0 4024 aa14.14□□□□□ -0.15
SDHA-220ENST00000617470 A0A096LPF7 62 aa14.14□□□□□ -0.15
SDHA-220ENST00000617470 TRAV8-3A0A0A6YYJ7 113 aa14.14□□□□□ -0.15
SDHA-220ENST00000617470 NUPR2A6NF83 97 aa14.14□□□□□ -0.15
SDHA-220ENST00000617470 SMAGPQ0VAQ4 97 aa14.14□□□□□ -0.15
SDHA-220ENST00000617470 IGLV4-60A0A075B6I1 120 aa14.13□□□□□ -0.15
SDHA-220ENST00000617470 FXYD2P54710 66 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms