RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 POLR3KQ9Y2Y1 108 aaPredicted RBP9.52□□□□□ -0.89
TCF4-248ENST00000616053 HIVEP3Q5T1R4 2406 aa9.51□□□□□ -0.89
TCF4-248ENST00000616053 KIF26AQ9ULI4 1882 aaPredicted RBP9.51□□□□□ -0.89
TCF4-248ENST00000616053 C11orf86A6NJI1 115 aa9.51□□□□□ -0.89
TCF4-248ENST00000616053 TOMM6Q96B49 74 aa9.51□□□□□ -0.89
TCF4-248ENST00000616053 WFDC10AQ9H1F0 79 aa9.51□□□□□ -0.89
TCF4-248ENST00000616053 TIMM17BO60830 172 aa9.51□□□□□ -0.89
TCF4-248ENST00000616053 COL18A1P39060 1754 aa9.51□□□□□ -0.89
TCF4-248ENST00000616053 K7EIM0 57 aa9.5□□□□□ -0.89
TCF4-248ENST00000616053 C6orf99Q4VX62 202 aa9.5□□□□□ -0.89
TCF4-248ENST00000616053 LELP1Q5T871 98 aa9.5□□□□□ -0.89
TCF4-248ENST00000616053 UNQ9165/PRO28630Q6UXU0 137 aa9.5□□□□□ -0.89
TCF4-248ENST00000616053 TRBV27A0A0K0K1C4 114 aa9.5□□□□□ -0.89
TCF4-248ENST00000616053 I3L2K1 104 aa9.5□□□□□ -0.89
TCF4-248ENST00000616053 ACACBO00763 2458 aa9.5□□□□□ -0.89
TCF4-248ENST00000616053 EDN2P20800 178 aa9.49□□□□□ -0.89
TCF4-248ENST00000616053 ZNF747Q9BV97 191 aa9.49□□□□□ -0.89
TCF4-248ENST00000616053 IGKV2D-30A0A075B6S6 120 aa9.49□□□□□ -0.89
TCF4-248ENST00000616053 H3BT86 120 aa9.49□□□□□ -0.89
TCF4-248ENST00000616053 IGKV2-30P06310 120 aa9.49□□□□□ -0.89
TCF4-248ENST00000616053 C1orf229Q6ZS94 237 aaPredicted RBP9.49□□□□□ -0.89
TCF4-248ENST00000616053 RITA1Q96K30 269 aa9.49□□□□□ -0.89
TCF4-248ENST00000616053 Q6ZSV7 163 aa9.49□□□□□ -0.89
TCF4-248ENST00000616053 PRAC2D3DTV9 90 aa9.49□□□□□ -0.89
TCF4-248ENST00000616053 MDFIQ99750 246 aa9.49□□□□□ -0.89
TCF4-248ENST00000616053 IMUPQ9GZP8 106 aa9.48□□□□□ -0.89
TCF4-248ENST00000616053 BDP1A6H8Y1 2624 aa9.48□□□□□ -0.89
TCF4-248ENST00000616053 A0A0J9YXY3 114 aa9.48□□□□□ -0.89
TCF4-248ENST00000616053 COLCA2A8K830 154 aa9.48□□□□□ -0.89
TCF4-248ENST00000616053 CFAP126Q5VTH2 177 aa9.48□□□□□ -0.89
TCF4-248ENST00000616053 NLRC5Q86WI3 1866 aa9.48□□□□□ -0.89
TCF4-248ENST00000616053 IBA57-AS1B1ANH7 110 aa9.47□□□□□ -0.89
TCF4-248ENST00000616053 LINC00467Q9BRT7 94 aa9.47□□□□□ -0.89
TCF4-248ENST00000616053 FHL2Q14192 279 aa9.47□□□□□ -0.89
TCF4-248ENST00000616053 C20orf203Q8NBC4 194 aa9.47□□□□□ -0.89
TCF4-248ENST00000616053 ADAMTSL1Q8N6G6 1762 aa9.47□□□□□ -0.89
TCF4-248ENST00000616053 ADAMTS9Q9P2N4 1935 aa9.47□□□□□ -0.89
TCF4-248ENST00000616053 C7orf65Q6ZTY9 151 aa9.47□□□□□ -0.89
TCF4-248ENST00000616053 NHLRC4P0CG21 123 aaPredicted RBP9.46□□□□□ -0.89
TCF4-248ENST00000616053 LINC00643Q86TS7 51 aa9.46□□□□□ -0.89
TCF4-248ENST00000616053 GPR179Q6PRD1 2367 aa9.46□□□□□ -0.89
TCF4-248ENST00000616053 ZNF503-AS2A6NEH8 195 aa9.46□□□□□ -0.9
TCF4-248ENST00000616053 ODF3BA8MYP8 253 aa9.46□□□□□ -0.9
TCF4-248ENST00000616053 SNURFQ9Y675 71 aa9.46□□□□□ -0.9
TCF4-248ENST00000616053 ATP5EP2Q5VTU8 51 aa9.46□□□□□ -0.9
TCF4-248ENST00000616053 TP53TG3Q9ULZ0 132 aa9.46□□□□□ -0.9
TCF4-248ENST00000616053 KIAA1551Q9HCM1 1747 aa9.45□□□□□ -0.9
TCF4-248ENST00000616053 POM121L12Q8N7R1 296 aa9.45□□□□□ -0.9
TCF4-248ENST00000616053 PLA2G2EQ9NZK7 142 aa9.45□□□□□ -0.9
TCF4-248ENST00000616053 Q6ZQY7 126 aa9.45□□□□□ -0.9
TCF4-248ENST00000616053 SPACA4Q8TDM5 124 aa9.45□□□□□ -0.9
TCF4-248ENST00000616053 BTCP35070 178 aa9.45□□□□□ -0.9
TCF4-248ENST00000616053 ATP5EP56381 51 aaPredicted RBP9.45□□□□□ -0.9
TCF4-248ENST00000616053 CD164L2Q6UWJ8 174 aa9.45□□□□□ -0.9
TCF4-248ENST00000616053 E9PLD3 99 aa9.44□□□□□ -0.9
TCF4-248ENST00000616053 NUP210LQ5VU65 1888 aa9.44□□□□□ -0.9
TCF4-248ENST00000616053 C16orf90A8MZG2 172 aa9.43□□□□□ -0.9
TCF4-248ENST00000616053 C6orf223Q8N319 242 aa9.43□□□□□ -0.9
TCF4-248ENST00000616053 TRBV6-4A0A1B0GX49 114 aa9.43□□□□□ -0.9
TCF4-248ENST00000616053 NDUFC1O43677 76 aa9.43□□□□□ -0.9
TCF4-248ENST00000616053 SBSPONQ8IVN8 264 aa9.43□□□□□ -0.9
TCF4-248ENST00000616053 ZFHX2Q9C0A1 2572 aaPredicted RBP9.43□□□□□ -0.9
TCF4-248ENST00000616053 PCOTHQ58A44 107 aa9.43□□□□□ -0.9
TCF4-248ENST00000616053 IGLC6P0CF74 106 aa9.43□□□□□ -0.9
TCF4-248ENST00000616053 TRBV30A0A0K0K1B3 111 aa9.43□□□□□ -0.9
TCF4-248ENST00000616053 SPRNQ5BIV9 151 aa9.43□□□□□ -0.9
TCF4-248ENST00000616053 LINC00208Q96KT6 92 aa9.42□□□□□ -0.9
TCF4-248ENST00000616053 RBX1P62877 108 aa9.42□□□□□ -0.9
TCF4-248ENST00000616053 PATE2Q6UY27 113 aa9.42□□□□□ -0.9
TCF4-248ENST00000616053 NDUFV3P56181 108 aaKnown RBP9.42□□□□□ -0.9
TCF4-248ENST00000616053 FNDC1Q4ZHG4 1894 aaPredicted RBP9.41□□□□□ -0.9
TCF4-248ENST00000616053 TRBV6-5A0A0K0K1A5 114 aa9.41□□□□□ -0.9
TCF4-248ENST00000616053 BRI3O95415 125 aa9.41□□□□□ -0.9
TCF4-248ENST00000616053 MSMPQ1L6U9 139 aa9.41□□□□□ -0.9
TCF4-248ENST00000616053 KIAA1671Q9BY89 1806 aa9.41□□□□□ -0.9
TCF4-248ENST00000616053 C19orf84I3L1E1 186 aa9.41□□□□□ -0.9
TCF4-248ENST00000616053 Q8N7P7 452 aa9.41□□□□□ -0.9
TCF4-248ENST00000616053 IGLV3-1P01715 115 aa9.41□□□□□ -0.9
TCF4-248ENST00000616053 LINC01006Q8NI28 216 aa9.41□□□□□ -0.9
TCF4-248ENST00000616053 U3KQA8 63 aa9.4□□□□□ -0.9
TCF4-248ENST00000616053 CDPF1Q6NVV7 123 aa9.4□□□□□ -0.91
TCF4-248ENST00000616053 Q8NA96 180 aa9.4□□□□□ -0.91
TCF4-248ENST00000616053 NYNRINQ9P2P1 1898 aaKnown RBP9.39□□□□□ -0.91
TCF4-248ENST00000616053 RNASE3P12724 160 aaKnown RBP9.39□□□□□ -0.91
TCF4-248ENST00000616053 NEXN-AS1Q8NBZ9 246 aa9.39□□□□□ -0.91
TCF4-248ENST00000616053 SMR3AQ99954 134 aa9.39□□□□□ -0.91
TCF4-248ENST00000616053 CELA1Q9UNI1 258 aa9.39□□□□□ -0.91
TCF4-248ENST00000616053 C11orf53Q8IXP5 236 aa9.39□□□□□ -0.91
TCF4-248ENST00000616053 ZNF73O43830 326 aaPredicted RBP9.39□□□□□ -0.91
TCF4-248ENST00000616053 C22orf34Q6ZV56 151 aa9.39□□□□□ -0.91
TCF4-248ENST00000616053 Q9BRP9 147 aa9.39□□□□□ -0.91
TCF4-248ENST00000616053 ZNF726P1Q15940 193 aa9.38□□□□□ -0.91
TCF4-248ENST00000616053 PROK2Q9HC23 129 aa9.38□□□□□ -0.91
TCF4-248ENST00000616053 CDKN2A-AS1Q9UH64 79 aa9.38□□□□□ -0.91
TCF4-248ENST00000616053 K7EN84 100 aa9.38□□□□□ -0.91
TCF4-248ENST00000616053 SPRY4Q9C004 299 aa9.37□□□□□ -0.91
TCF4-248ENST00000616053 LINC01547P58512 204 aaPredicted RBP9.37□□□□□ -0.91
TCF4-248ENST00000616053 WDR90Q96KV7 1748 aa9.37□□□□□ -0.91
TCF4-248ENST00000616053 A0A0G2JMZ2 1700 aa9.37□□□□□ -0.91
TCF4-248ENST00000616053 ODF3Q96PU9 254 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms