RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 TRAV10A0A0B4J240 114 aa15.09■□□□□ 0.01
USF2-216ENST00000607959 PMVKQ15126 192 aa15.09■□□□□ 0.01
USF2-216ENST00000607959 AMELXQ99217 191 aa15.09■□□□□ 0.01
USF2-216ENST00000607959 GAGE6Q13070 117 aa15.09■□□□□ 0.01
USF2-216ENST00000607959 PAM16Q9Y3D7 125 aa15.09■□□□□ 0.01
USF2-216ENST00000607959 DYNC2H1Q8NCM8 4307 aaKnown RBP15.09■□□□□ 0.01
USF2-216ENST00000607959 NPSP0C0P6 89 aa15.07■□□□□ 0
USF2-216ENST00000607959 CHTOPQ9Y3Y2 248 aaKnown RBP15.07■□□□□ 0
USF2-216ENST00000607959 CSDC2Q9Y534 153 aaKnown RBP15.07■□□□□ 0
USF2-216ENST00000607959 IGLV4-69A0A075B6H9 119 aa15.07■□□□□ 0
USF2-216ENST00000607959 hDV102S1A0JD36 115 aa15.07■□□□□ 0
USF2-216ENST00000607959 H7C423 109 aa15.07■□□□□ 0
USF2-216ENST00000607959 MRPS36P82909 103 aaKnown RBP15.07■□□□□ 0
USF2-216ENST00000607959 CHCHD5Q9BSY4 110 aa15.07■□□□□ 0
USF2-216ENST00000607959 F8VRH5 84 aa15.06■□□□□ 0
USF2-216ENST00000607959 DDTP30046 118 aa15.06■□□□□ 0
USF2-216ENST00000607959 LYPD5Q6UWN5 251 aa15.06■□□□□ 0
USF2-216ENST00000607959 SH2D6Q7Z4S9 175 aa15.06■□□□□ 0
USF2-216ENST00000607959 TRAV9-2A0A087WT02 112 aa15.05■□□□□ -0
USF2-216ENST00000607959 UBE2L6O14933 153 aa15.05■□□□□ -0
USF2-216ENST00000607959 VCX2Q9H322 139 aa15.05■□□□□ -0
USF2-216ENST00000607959 CDC42SE2Q9NRR3 84 aa15.05■□□□□ -0
USF2-216ENST00000607959 DNAH7Q8WXX0 4024 aa15.04■□□□□ -0
USF2-216ENST00000607959 IGLV4-60A0A075B6I1 120 aa15.04■□□□□ -0
USF2-216ENST00000607959 DPM2O94777 84 aa15.04■□□□□ -0
USF2-216ENST00000607959 IGKCP01834 107 aa15.04■□□□□ -0
USF2-216ENST00000607959 SPATA45Q537H7 98 aa15.04■□□□□ -0
USF2-216ENST00000607959 Q8N3U1 123 aa15.03■□□□□ -0
USF2-216ENST00000607959 TIRAPP58753 221 aa15.02■□□□□ -0
USF2-216ENST00000607959 LELP1Q5T871 98 aa15.02■□□□□ -0
USF2-216ENST00000607959 AMMECR1LQ6DCA0 310 aa15.02■□□□□ -0
USF2-216ENST00000607959 DGAT2L7PQ6IED9 249 aa15.02■□□□□ -0
USF2-216ENST00000607959 C11orf86A6NJI1 115 aa15.02□□□□□ -0.01
USF2-216ENST00000607959 MPV17L2Q567V2 206 aa15.02□□□□□ -0.01
USF2-216ENST00000607959 PAPPA-AS1Q5QFB9 102 aa15.02□□□□□ -0.01
USF2-216ENST00000607959 STPG4Q8N801 248 aa15.02□□□□□ -0.01
USF2-216ENST00000607959 OR5A1Q8NGJ0 315 aa15.02□□□□□ -0.01
USF2-216ENST00000607959 CSMD3Q7Z407 3707 aa15.01□□□□□ -0.01
USF2-216ENST00000607959 ESRGQ1W209 222 aa15.01□□□□□ -0.01
USF2-216ENST00000607959 ZNF25P17030 456 aaPredicted RBP15□□□□□ -0.01
USF2-216ENST00000607959 A0A0J9YXV3 536 aa15□□□□□ -0.01
USF2-216ENST00000607959 RBX1P62877 108 aa15□□□□□ -0.01
USF2-216ENST00000607959 ANKRD39Q53RE8 183 aa15□□□□□ -0.01
USF2-216ENST00000607959 PLNP26678 52 aa14.99□□□□□ -0.01
USF2-216ENST00000607959 A0A1B0GUV1 79 aa14.98□□□□□ -0.01
USF2-216ENST00000607959 IGLC3P0DOY3 106 aa14.98□□□□□ -0.01
USF2-216ENST00000607959 UBE2D1P51668 147 aa14.98□□□□□ -0.01
USF2-216ENST00000607959 NFE4Q86UQ8 179 aa14.98□□□□□ -0.01
USF2-216ENST00000607959 SMAGPQ0VAQ4 97 aa14.98□□□□□ -0.01
USF2-216ENST00000607959 TMEM101Q96IK0 257 aa14.98□□□□□ -0.01
USF2-216ENST00000607959 MIEN1Q9BRT3 115 aa14.98□□□□□ -0.01
USF2-216ENST00000607959 TMEM262E9PQX1 116 aa14.97□□□□□ -0.01
USF2-216ENST00000607959 TCTAP57738 103 aa14.96□□□□□ -0.01
USF2-216ENST00000607959 IGLL5B9A064 214 aa14.96□□□□□ -0.02
USF2-216ENST00000607959 C15orf53Q8NAA6 179 aa14.96□□□□□ -0.02
USF2-216ENST00000607959 C14orf144Q96I85 54 aa14.96□□□□□ -0.02
USF2-216ENST00000607959 CHAC1Q9BUX1 264 aa14.95□□□□□ -0.02
USF2-216ENST00000607959 WFDC10BQ8IUB3 73 aa14.94□□□□□ -0.02
USF2-216ENST00000607959 LINC00469Q8N7U9 141 aa14.94□□□□□ -0.02
USF2-216ENST00000607959 C2orf88Q9BSF0 95 aa14.94□□□□□ -0.02
USF2-216ENST00000607959 IGKV2D-26A0A0A0MRZ7 120 aa14.93□□□□□ -0.02
USF2-216ENST00000607959 ZNF22P17026 224 aaPredicted RBP14.93□□□□□ -0.02
USF2-216ENST00000607959 COX6A2Q02221 97 aa14.92□□□□□ -0.02
USF2-216ENST00000607959 LINC00242Q5T6M2 205 aa14.92□□□□□ -0.02
USF2-216ENST00000607959 FAM19A3Q7Z5A8 133 aa14.92□□□□□ -0.02
USF2-216ENST00000607959 TP73-AS1Q9UF72 201 aa14.92□□□□□ -0.02
USF2-216ENST00000607959 PLECQ15149 4684 aaKnown RBP14.92□□□□□ -0.02
USF2-216ENST00000607959 TRAV13-1A0A0B4J241 112 aa14.92□□□□□ -0.02
USF2-216ENST00000607959 TINCRA0A1B0GVN0 87 aa14.92□□□□□ -0.02
USF2-216ENST00000607959 HSBP1L1C9JCN9 74 aa14.92□□□□□ -0.02
USF2-216ENST00000607959 UQCR10Q9UDW1 63 aa14.9□□□□□ -0.02
USF2-216ENST00000607959 STARD9Q9P2P6 4700 aa14.9□□□□□ -0.02
USF2-216ENST00000607959 TGP01266 2768 aa14.9□□□□□ -0.02
USF2-216ENST00000607959 TRAV8-6A0A0B4J262 113 aa14.89□□□□□ -0.03
USF2-216ENST00000607959 IGKV3OR2-268A0A0C4DH90 116 aa14.88□□□□□ -0.03
USF2-216ENST00000607959 TMEM170BQ5T4T1 132 aa14.88□□□□□ -0.03
USF2-216ENST00000607959 LINC00588Q9Y4M8 146 aa14.88□□□□□ -0.03
USF2-216ENST00000607959 CLPSL2Q6UWE3 100 aa14.88□□□□□ -0.03
USF2-216ENST00000607959 LINC00269Q8N2A0 174 aa14.88□□□□□ -0.03
USF2-216ENST00000607959 IGLV5-45A0A087WSX0 123 aa14.87□□□□□ -0.03
USF2-216ENST00000607959 APLNQ9ULZ1 77 aa14.87□□□□□ -0.03
USF2-216ENST00000607959 LYSTQ99698 3801 aa14.87□□□□□ -0.03
USF2-216ENST00000607959 LINC00959A0A1B0GUT2 108 aa14.86□□□□□ -0.03
USF2-216ENST00000607959 TMEM223A0PJW6 202 aa14.86□□□□□ -0.03
USF2-216ENST00000607959 TTTY13Q9BZ97 58 aa14.86□□□□□ -0.03
USF2-216ENST00000607959 CDKN2A-AS1Q9UH64 79 aa14.86□□□□□ -0.03
USF2-216ENST00000607959 TENM2Q9NT68 2774 aa14.86□□□□□ -0.03
USF2-216ENST00000607959 IGHV3-30P01768 117 aa14.86□□□□□ -0.03
USF2-216ENST00000607959 IGHV3-33P01772 117 aa14.86□□□□□ -0.03
USF2-216ENST00000607959 ANGP03950 147 aaKnown RBP14.86□□□□□ -0.03
USF2-216ENST00000607959 IGHV3-30-3P0DP02 117 aa14.86□□□□□ -0.03
USF2-216ENST00000607959 IGHV3-30-5P0DP03 117 aa14.86□□□□□ -0.03
USF2-216ENST00000607959 PCP2Q8IVA1 136 aa14.86□□□□□ -0.03
USF2-216ENST00000607959 E9PLD3 99 aa14.84□□□□□ -0.03
USF2-216ENST00000607959 COX8AP10176 69 aa14.84□□□□□ -0.03
USF2-216ENST00000607959 NMUP48645 174 aa14.84□□□□□ -0.03
USF2-216ENST00000607959 GEMIN7Q9H840 131 aaKnown RBP14.84□□□□□ -0.03
USF2-216ENST00000607959 MRPS16Q9Y3D3 137 aaKnown RBP14.84□□□□□ -0.03
USF2-216ENST00000607959 HERVK_113P63121 156 aa14.82□□□□□ -0.04
USF2-216ENST00000607959 REG3AQ06141 175 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms