RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 RPL36ALQ969Q0 106 aaKnown RBP11.34□□□□□ -0.59
CTSA-214ENST00000606788 ZNF625Q96I27 306 aaPredicted RBP11.34□□□□□ -0.59
CTSA-214ENST00000606788 A0A0J9YY99 117 aa11.33□□□□□ -0.6
CTSA-214ENST00000606788 FABP2P12104 132 aa11.33□□□□□ -0.6
CTSA-214ENST00000606788 TMEM223A0PJW6 202 aa11.33□□□□□ -0.6
CTSA-214ENST00000606788 DEFB135Q30KP9 77 aa11.33□□□□□ -0.6
CTSA-214ENST00000606788 PAPPA-AS1Q5QFB9 102 aa11.33□□□□□ -0.6
CTSA-214ENST00000606788 CSNK1G2-AS1Q8NCQ2 148 aa11.32□□□□□ -0.6
CTSA-214ENST00000606788 GEMIN7Q9H840 131 aaKnown RBP11.32□□□□□ -0.6
CTSA-214ENST00000606788 FBN1P35555 2871 aaKnown RBP11.32□□□□□ -0.6
CTSA-214ENST00000606788 LINC01549A6NIU2 74 aa11.32□□□□□ -0.6
CTSA-214ENST00000606788 IGHV3-30-3P0DP02 117 aa11.32□□□□□ -0.6
CTSA-214ENST00000606788 DAND5Q8N907 189 aa11.32□□□□□ -0.6
CTSA-214ENST00000606788 PRSS2P07478 247 aa11.31□□□□□ -0.6
CTSA-214ENST00000606788 COX6A2Q02221 97 aa11.31□□□□□ -0.6
CTSA-214ENST00000606788 TIMM21Q9BVV7 248 aa11.31□□□□□ -0.6
CTSA-214ENST00000606788 CDKN2A-AS1Q9UH64 79 aa11.31□□□□□ -0.6
CTSA-214ENST00000606788 IGLL5B9A064 214 aa11.31□□□□□ -0.6
CTSA-214ENST00000606788 IL17DQ8TAD2 202 aa11.31□□□□□ -0.6
CTSA-214ENST00000606788 PGPEP1Q9NXJ5 209 aa11.31□□□□□ -0.6
CTSA-214ENST00000606788 NFE4Q86UQ8 179 aa11.3□□□□□ -0.6
CTSA-214ENST00000606788 C16orf74Q96GX8 76 aa11.3□□□□□ -0.6
CTSA-214ENST00000606788 GAGE6Q13070 117 aa11.3□□□□□ -0.6
CTSA-214ENST00000606788 TRAV4A0A0B4J268 109 aa11.29□□□□□ -0.6
CTSA-214ENST00000606788 LOC107984156A0A0G2JMH3 177 aa11.29□□□□□ -0.6
CTSA-214ENST00000606788 ARL17AQ8IVW1 177 aa11.29□□□□□ -0.6
CTSA-214ENST00000606788 AMELXQ99217 191 aa11.29□□□□□ -0.6
CTSA-214ENST00000606788 K7EP34 96 aa11.29□□□□□ -0.6
CTSA-214ENST00000606788 C10orf126Q8N4M7 172 aa11.29□□□□□ -0.6
CTSA-214ENST00000606788 H3BMG7 143 aa11.29□□□□□ -0.6
CTSA-214ENST00000606788 GTF2H5Q6ZYL4 71 aa11.29□□□□□ -0.6
CTSA-214ENST00000606788 C1QTNF4Q9BXJ3 329 aa11.29□□□□□ -0.6
CTSA-214ENST00000606788 CLUHP3Q96NS8 147 aa11.28□□□□□ -0.6
CTSA-214ENST00000606788 LEPROTO15243 131 aa11.27□□□□□ -0.61
CTSA-214ENST00000606788 PYGO1Q9Y3Y4 419 aa11.27□□□□□ -0.61
CTSA-214ENST00000606788 UBE2L6O14933 153 aa11.26□□□□□ -0.61
CTSA-214ENST00000606788 DAZ2Q13117 558 aaKnown RBP11.26□□□□□ -0.61
CTSA-214ENST00000606788 DNAJC30Q96LL9 226 aa11.26□□□□□ -0.61
CTSA-214ENST00000606788 SPANXA1Q9NS26 97 aa11.26□□□□□ -0.61
CTSA-214ENST00000606788 UBE2D3P61077 147 aa11.26□□□□□ -0.61
CTSA-214ENST00000606788 UBE2D2P62837 147 aa11.26□□□□□ -0.61
CTSA-214ENST00000606788 EDA2RQ9HAV5 297 aa11.26□□□□□ -0.61
CTSA-214ENST00000606788 HTN3P15516 51 aa11.25□□□□□ -0.61
CTSA-214ENST00000606788 MRPS36P82909 103 aaKnown RBP11.25□□□□□ -0.61
CTSA-214ENST00000606788 PIK3CD-AS1Q5SR53 167 aa11.25□□□□□ -0.61
CTSA-214ENST00000606788 CLPSL2Q6UWE3 100 aa11.25□□□□□ -0.61
CTSA-214ENST00000606788 NDUFA12Q9UI09 145 aa11.25□□□□□ -0.61
CTSA-214ENST00000606788 CMC4P56277 68 aaPredicted RBP11.25□□□□□ -0.61
CTSA-214ENST00000606788 MUSTN1Q8IVN3 82 aa11.25□□□□□ -0.61
CTSA-214ENST00000606788 CHCHD5Q9BSY4 110 aa11.25□□□□□ -0.61
CTSA-214ENST00000606788 A4D1N5 150 aa11.24□□□□□ -0.61
CTSA-214ENST00000606788 RPL24P83731 157 aaKnown RBP11.24□□□□□ -0.61
CTSA-214ENST00000606788 TAL2Q16559 108 aa11.24□□□□□ -0.61
CTSA-214ENST00000606788 BAHCC1Q9P281 2608 aa11.24□□□□□ -0.61
CTSA-214ENST00000606788 IGHV3-30P01768 117 aa11.24□□□□□ -0.61
CTSA-214ENST00000606788 IGHV3-30-5P0DP03 117 aa11.24□□□□□ -0.61
CTSA-214ENST00000606788 ADAMTSL4-AS1Q5T5F5 129 aa11.24□□□□□ -0.61
CTSA-214ENST00000606788 A0A0J9YXY3 114 aa11.23□□□□□ -0.61
CTSA-214ENST00000606788 UBE2D1P51668 147 aa11.23□□□□□ -0.61
CTSA-214ENST00000606788 FHL2Q14192 279 aa11.23□□□□□ -0.61
CTSA-214ENST00000606788 OR5A1Q8NGJ0 315 aa11.23□□□□□ -0.61
CTSA-214ENST00000606788 PTH2Q96A98 100 aa11.23□□□□□ -0.61
CTSA-214ENST00000606788 OXLD1Q5BKU9 147 aa11.23□□□□□ -0.61
CTSA-214ENST00000606788 FAM222AQ5U5X8 452 aa11.23□□□□□ -0.61
CTSA-214ENST00000606788 EIF4EBP3O60516 100 aaPredicted RBP11.22□□□□□ -0.61
CTSA-214ENST00000606788 CFC1BP0CG36 223 aa11.22□□□□□ -0.61
CTSA-214ENST00000606788 CFC1P0CG37 223 aa11.22□□□□□ -0.61
CTSA-214ENST00000606788 LINC00242Q5T6M2 205 aa11.22□□□□□ -0.61
CTSA-214ENST00000606788 GYPEP15421 78 aa11.22□□□□□ -0.61
CTSA-214ENST00000606788 WFDC2Q14508 124 aa11.22□□□□□ -0.61
CTSA-214ENST00000606788 TMEM243Q9BU79 118 aa11.22□□□□□ -0.61
CTSA-214ENST00000606788 IGLV4-60A0A075B6I1 120 aa11.21□□□□□ -0.61
CTSA-214ENST00000606788 IGHV1-58A0A0C4DH39 117 aa11.21□□□□□ -0.61
CTSA-214ENST00000606788 TMEM262E9PQX1 116 aa11.21□□□□□ -0.61
CTSA-214ENST00000606788 TSPAN13O95857 204 aa11.21□□□□□ -0.61
CTSA-214ENST00000606788 OCIAD2Q56VL3 154 aa11.21□□□□□ -0.61
CTSA-214ENST00000606788 C9orf66Q5T8R8 295 aa11.21□□□□□ -0.61
CTSA-214ENST00000606788 X6R8D5 127 aa11.21□□□□□ -0.61
CTSA-214ENST00000606788 PSMB2P49721 201 aa11.21□□□□□ -0.62
CTSA-214ENST00000606788 DAZ4Q86SG3 579 aaKnown RBP11.21□□□□□ -0.62
CTSA-214ENST00000606788 VSIG2Q96IQ7 327 aa11.21□□□□□ -0.62
CTSA-214ENST00000606788 DAZ3Q9NR90 486 aaKnown RBP11.21□□□□□ -0.62
CTSA-214ENST00000606788 TOMM7Q9P0U1 55 aa11.21□□□□□ -0.62
CTSA-214ENST00000606788 TENM3Q9P273 2699 aa11.21□□□□□ -0.62
CTSA-214ENST00000606788 TINCRA0A1B0GVN0 87 aa11.2□□□□□ -0.62
CTSA-214ENST00000606788 TMEM101Q96IK0 257 aa11.2□□□□□ -0.62
CTSA-214ENST00000606788 TRBV10-1A0A0K0K1A3 114 aa11.2□□□□□ -0.62
CTSA-214ENST00000606788 TMEM238LA0A1B0GVL6 79 aa11.2□□□□□ -0.62
CTSA-214ENST00000606788 A6NJY4 79 aa11.2□□□□□ -0.62
CTSA-214ENST00000606788 SH2D6Q7Z4S9 175 aa11.2□□□□□ -0.62
CTSA-214ENST00000606788 C11orf68Q9H3H3 251 aaKnown RBP11.2□□□□□ -0.62
CTSA-214ENST00000606788 Q1RN00 199 aa11.19□□□□□ -0.62
CTSA-214ENST00000606788 NBEAL1Q6ZS30 2694 aa11.19□□□□□ -0.62
CTSA-214ENST00000606788 Q8N3U1 123 aa11.19□□□□□ -0.62
CTSA-214ENST00000606788 FAM110AQ9BQ89 295 aa11.19□□□□□ -0.62
CTSA-214ENST00000606788 SCGB1C2P0DMR2 95 aa11.18□□□□□ -0.62
CTSA-214ENST00000606788 VPS25Q9BRG1 176 aa11.18□□□□□ -0.62
CTSA-214ENST00000606788 OVOL2Q9BRP0 275 aa11.18□□□□□ -0.62
CTSA-214ENST00000606788 Q9H8V8 135 aa11.18□□□□□ -0.62
CTSA-214ENST00000606788 CDC42SE2Q9NRR3 84 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 229.3 ms