RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 TEN1Q86WV5 123 aa8.21□□□□□ -1.09
SHANK2-219ENST00000606715 SONP18583 2426 aaKnown RBP8.21□□□□□ -1.1
SHANK2-219ENST00000606715 ANKRD39Q53RE8 183 aa8.21□□□□□ -1.1
SHANK2-219ENST00000606715 C1orf229Q6ZS94 237 aaPredicted RBP8.21□□□□□ -1.1
SHANK2-219ENST00000606715 IGLV5-52A0A0A0MRZ9 124 aa8.2□□□□□ -1.1
SHANK2-219ENST00000606715 IGLV1-40P01703 118 aa8.2□□□□□ -1.1
SHANK2-219ENST00000606715 ARHGAP21Q5T5U3 1957 aa8.2□□□□□ -1.1
SHANK2-219ENST00000606715 CLUHP3Q96NS8 147 aa8.2□□□□□ -1.1
SHANK2-219ENST00000606715 WFDC2Q14508 124 aa8.2□□□□□ -1.1
SHANK2-219ENST00000606715 LINC00173Q6ZV60 143 aa8.2□□□□□ -1.1
SHANK2-219ENST00000606715 PLAC8L1A1L4L8 177 aa8.19□□□□□ -1.1
SHANK2-219ENST00000606715 CDSNQ15517 529 aa8.19□□□□□ -1.1
SHANK2-219ENST00000606715 LINC00467Q9BRT7 94 aa8.19□□□□□ -1.1
SHANK2-219ENST00000606715 WFDC10AQ9H1F0 79 aa8.19□□□□□ -1.1
SHANK2-219ENST00000606715 PLA2G2EQ9NZK7 142 aa8.19□□□□□ -1.1
SHANK2-219ENST00000606715 TNRC6AQ8NDV7 1962 aaKnown RBP8.19□□□□□ -1.1
SHANK2-219ENST00000606715 IGLV4-69A0A075B6H9 119 aa8.18□□□□□ -1.1
SHANK2-219ENST00000606715 IGKV2-28A0A075B6P5 120 aa8.18□□□□□ -1.1
SHANK2-219ENST00000606715 TAX1BP3O14907 124 aa8.18□□□□□ -1.1
SHANK2-219ENST00000606715 IGKV2D-28P01615 120 aa8.18□□□□□ -1.1
SHANK2-219ENST00000606715 LELP1Q5T871 98 aa8.18□□□□□ -1.1
SHANK2-219ENST00000606715 ZNF580Q9UK33 172 aa8.18□□□□□ -1.1
SHANK2-219ENST00000606715 CCDC168Q8NDH2 2452 aa8.18□□□□□ -1.1
SHANK2-219ENST00000606715 IGLV9-49A0A0B4J1Y8 123 aa8.18□□□□□ -1.1
SHANK2-219ENST00000606715 FXYD2P54710 66 aa8.18□□□□□ -1.1
SHANK2-219ENST00000606715 NEXN-AS1Q8NBZ9 246 aa8.18□□□□□ -1.1
SHANK2-219ENST00000606715 TTTY13Q9BZ97 58 aa8.18□□□□□ -1.1
SHANK2-219ENST00000606715 EP400Q96L91 3159 aa8.18□□□□□ -1.1
SHANK2-219ENST00000606715 E9PLD3 99 aa8.18□□□□□ -1.1
SHANK2-219ENST00000606715 CFAP126Q5VTH2 177 aa8.18□□□□□ -1.1
SHANK2-219ENST00000606715 SPATA12Q7Z6I5 190 aa8.18□□□□□ -1.1
SHANK2-219ENST00000606715 MPLKIPQ8TAP9 179 aa8.18□□□□□ -1.1
SHANK2-219ENST00000606715 TCL1BO95988 128 aa8.17□□□□□ -1.1
SHANK2-219ENST00000606715 CDPF1Q6NVV7 123 aa8.17□□□□□ -1.1
SHANK2-219ENST00000606715 C18orf65Q6ZTR6 163 aa8.17□□□□□ -1.1
SHANK2-219ENST00000606715 TRAV23DV6A0A075B6W5 121 aa8.17□□□□□ -1.1
SHANK2-219ENST00000606715 PCNX3Q9H6A9 2034 aa8.17□□□□□ -1.1
SHANK2-219ENST00000606715 C20orf173Q96LM9 149 aa8.16□□□□□ -1.1
SHANK2-219ENST00000606715 MRPL55Q7Z7F7 128 aaKnown RBP8.16□□□□□ -1.1
SHANK2-219ENST00000606715 C3orf22Q8N5N4 141 aa8.16□□□□□ -1.1
SHANK2-219ENST00000606715 CRIP2P52943 208 aaPredicted RBP8.16□□□□□ -1.1
SHANK2-219ENST00000606715 KRTAP10-9P60411 292 aa8.16□□□□□ -1.1
SHANK2-219ENST00000606715 C1orf134Q5TEV5 83 aa8.16□□□□□ -1.1
SHANK2-219ENST00000606715 BRI3O95415 125 aa8.16□□□□□ -1.1
SHANK2-219ENST00000606715 WFDC10BQ8IUB3 73 aa8.16□□□□□ -1.1
SHANK2-219ENST00000606715 MLST8Q9BVC4 326 aa8.16□□□□□ -1.1
SHANK2-219ENST00000606715 IGLC6P0CF74 106 aa8.15□□□□□ -1.1
SHANK2-219ENST00000606715 FRMD6-AS1P0C7T7 363 aa8.15□□□□□ -1.1
SHANK2-219ENST00000606715 TLN1Q9Y490 2541 aaKnown RBP8.15□□□□□ -1.1
SHANK2-219ENST00000606715 RBX1P62877 108 aa8.15□□□□□ -1.1
SHANK2-219ENST00000606715 RETNQ9HD89 108 aa8.15□□□□□ -1.11
SHANK2-219ENST00000606715 ZNF295-AS1Q8N0V1 137 aa8.14□□□□□ -1.11
SHANK2-219ENST00000606715 TEX49A0A1B0GTD5 131 aa8.14□□□□□ -1.11
SHANK2-219ENST00000606715 DCANP1Q8TF63 244 aa8.14□□□□□ -1.11
SHANK2-219ENST00000606715 SPANXB1Q9NS25 103 aaPredicted RBP8.14□□□□□ -1.11
SHANK2-219ENST00000606715 C16orf95Q9H693 158 aa8.14□□□□□ -1.11
SHANK2-219ENST00000606715 RPL28P46779 137 aaKnown RBP8.14□□□□□ -1.11
SHANK2-219ENST00000606715 H3BT86 120 aa8.14□□□□□ -1.11
SHANK2-219ENST00000606715 IBA57-AS1B1ANH7 110 aa8.13□□□□□ -1.11
SHANK2-219ENST00000606715 ZNF80P51504 273 aaPredicted RBP8.13□□□□□ -1.11
SHANK2-219ENST00000606715 DHRS4-AS1Q9P1J3 65 aa8.13□□□□□ -1.11
SHANK2-219ENST00000606715 HIVEP3Q5T1R4 2406 aa8.13□□□□□ -1.11
SHANK2-219ENST00000606715 RPL37AP8A6NKH3 93 aa8.13□□□□□ -1.11
SHANK2-219ENST00000606715 NUPR1O60356 82 aa8.13□□□□□ -1.11
SHANK2-219ENST00000606715 GDF5OSQ5U4N7 250 aa8.13□□□□□ -1.11
SHANK2-219ENST00000606715 CD164L2Q6UWJ8 174 aa8.13□□□□□ -1.11
SHANK2-219ENST00000606715 C1orf158Q8N1D5 194 aa8.13□□□□□ -1.11
SHANK2-219ENST00000606715 FAM236DA0A1B0GTK5 79 aa8.13□□□□□ -1.11
SHANK2-219ENST00000606715 FAM236CP0DP71 79 aa8.13□□□□□ -1.11
SHANK2-219ENST00000606715 TDRG1Q3Y452 100 aa8.12□□□□□ -1.11
SHANK2-219ENST00000606715 LINC00526Q96FQ7 95 aa8.12□□□□□ -1.11
SHANK2-219ENST00000606715 A0A1B0GXF2 115 aa8.12□□□□□ -1.11
SHANK2-219ENST00000606715 NHLRC4P0CG21 123 aaPredicted RBP8.12□□□□□ -1.11
SHANK2-219ENST00000606715 PTH2Q96A98 100 aa8.12□□□□□ -1.11
SHANK2-219ENST00000606715 M0R378 163 aa8.12□□□□□ -1.11
SHANK2-219ENST00000606715 CDKN2A-AS1Q9UH64 79 aa8.12□□□□□ -1.11
SHANK2-219ENST00000606715 IGLV2-8P01709 118 aa8.12□□□□□ -1.11
SHANK2-219ENST00000606715 MRGPRG-AS1Q2M3A8 158 aa8.12□□□□□ -1.11
SHANK2-219ENST00000606715 PRR14LQ5THK1 2151 aa8.11□□□□□ -1.11
SHANK2-219ENST00000606715 A0A0U1RQV1 116 aa8.11□□□□□ -1.11
SHANK2-219ENST00000606715 PIK3CD-AS1Q5SR53 167 aa8.11□□□□□ -1.11
SHANK2-219ENST00000606715 C20orf197Q8N268 126 aa8.11□□□□□ -1.11
SHANK2-219ENST00000606715 HIGD1BQ9P298 99 aa8.11□□□□□ -1.11
SHANK2-219ENST00000606715 AVPP01185 164 aa8.11□□□□□ -1.11
SHANK2-219ENST00000606715 SCXQ7RTU7 201 aa8.11□□□□□ -1.11
SHANK2-219ENST00000606715 MYO18BQ8IUG5 2567 aa8.1□□□□□ -1.11
SHANK2-219ENST00000606715 RNASE8Q8TDE3 154 aaKnown RBP8.1□□□□□ -1.11
SHANK2-219ENST00000606715 A0A0J9YXY3 114 aa8.1□□□□□ -1.11
SHANK2-219ENST00000606715 PROK1P58294 105 aa8.1□□□□□ -1.11
SHANK2-219ENST00000606715 LINC00643Q86TS7 51 aa8.1□□□□□ -1.11
SHANK2-219ENST00000606715 LOC100131303A0A0U1RQF7 123 aa8.1□□□□□ -1.11
SHANK2-219ENST00000606715 CIRBP-AS1Q8TBR5 109 aa8.09□□□□□ -1.11
SHANK2-219ENST00000606715 WNK1Q9H4A3 2382 aa8.09□□□□□ -1.11
SHANK2-219ENST00000606715 COL4A2P08572 1712 aa8.09□□□□□ -1.11
SHANK2-219ENST00000606715 IGLV2-11P01706 119 aa8.09□□□□□ -1.11
SHANK2-219ENST00000606715 SERP1Q9Y6X1 66 aa8.09□□□□□ -1.11
SHANK2-219ENST00000606715 SDIM1Q6ZPB5 146 aa8.08□□□□□ -1.12
SHANK2-219ENST00000606715 PIEZO2Q9H5I5 2752 aa8.08□□□□□ -1.12
SHANK2-219ENST00000606715 FAM240AA0A1B0GVK7 77 aa8.08□□□□□ -1.12
SHANK2-219ENST00000606715 PRR15LQ9BU68 103 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms