RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 ATP6V0E2Q8NHE4 81 aa13.42□□□□□ -0.26
TUBB4B-202ENST00000604929 AMELXQ99217 191 aa13.42□□□□□ -0.26
TUBB4B-202ENST00000604929 TRBV25-1A0A075B6N4 114 aa13.42□□□□□ -0.26
TUBB4B-202ENST00000604929 TMEM170BQ5T4T1 132 aa13.42□□□□□ -0.26
TUBB4B-202ENST00000604929 TMEM243Q9BU79 118 aa13.42□□□□□ -0.26
TUBB4B-202ENST00000604929 TRBV6-8A0A0A6YYG3 113 aa13.41□□□□□ -0.26
TUBB4B-202ENST00000604929 UBE2L6O14933 153 aa13.41□□□□□ -0.26
TUBB4B-202ENST00000604929 C12orf74Q32Q52 190 aa13.41□□□□□ -0.26
TUBB4B-202ENST00000604929 SNHG12Q9BXW3 62 aa13.41□□□□□ -0.26
TUBB4B-202ENST00000604929 TRAV8-6A0A0B4J262 113 aa13.4□□□□□ -0.26
TUBB4B-202ENST00000604929 BOD1L2Q8IYS8 172 aa13.4□□□□□ -0.26
TUBB4B-202ENST00000604929 BATFQ16520 125 aa13.4□□□□□ -0.26
TUBB4B-202ENST00000604929 CHAC1Q9BUX1 264 aa13.4□□□□□ -0.26
TUBB4B-202ENST00000604929 EREGO14944 169 aa13.39□□□□□ -0.27
TUBB4B-202ENST00000604929 GAGE6Q13070 117 aa13.39□□□□□ -0.27
TUBB4B-202ENST00000604929 AMMECR1LQ6DCA0 310 aa13.39□□□□□ -0.27
TUBB4B-202ENST00000604929 A0A0J9YWU9 116 aa13.39□□□□□ -0.27
TUBB4B-202ENST00000604929 M0R143 59 aa13.39□□□□□ -0.27
TUBB4B-202ENST00000604929 CHCHD5Q9BSY4 110 aa13.39□□□□□ -0.27
TUBB4B-202ENST00000604929 MRPS16Q9Y3D3 137 aaKnown RBP13.39□□□□□ -0.27
TUBB4B-202ENST00000604929 TIMM21Q9BVV7 248 aa13.38□□□□□ -0.27
TUBB4B-202ENST00000604929 NPSP0C0P6 89 aa13.37□□□□□ -0.27
TUBB4B-202ENST00000604929 MAPKAPK5-AS1Q8N8E1 139 aa13.37□□□□□ -0.27
TUBB4B-202ENST00000604929 NFE4Q86UQ8 179 aa13.37□□□□□ -0.27
TUBB4B-202ENST00000604929 HINT1P49773 126 aaPredicted RBP13.36□□□□□ -0.27
TUBB4B-202ENST00000604929 MRPS36P82909 103 aaKnown RBP13.36□□□□□ -0.27
TUBB4B-202ENST00000604929 C2orf91Q6ZV80 131 aa13.36□□□□□ -0.27
TUBB4B-202ENST00000604929 MRPL52Q86TS9 123 aaKnown RBP13.36□□□□□ -0.27
TUBB4B-202ENST00000604929 OR5A1Q8NGJ0 315 aa13.36□□□□□ -0.27
TUBB4B-202ENST00000604929 C2orf88Q9BSF0 95 aa13.36□□□□□ -0.27
TUBB4B-202ENST00000604929 CDC42SE2Q9NRR3 84 aa13.35□□□□□ -0.27
TUBB4B-202ENST00000604929 TEX48A0A1B0GUV7 120 aa13.35□□□□□ -0.27
TUBB4B-202ENST00000604929 KPRPQ5T749 579 aaPredicted RBP13.35□□□□□ -0.27
TUBB4B-202ENST00000604929 Q6ZTC4 211 aa13.35□□□□□ -0.27
TUBB4B-202ENST00000604929 CSDC2Q9Y534 153 aaKnown RBP13.35□□□□□ -0.27
TUBB4B-202ENST00000604929 E9PLD3 99 aa13.34□□□□□ -0.27
TUBB4B-202ENST00000604929 ZNF22P17026 224 aaPredicted RBP13.34□□□□□ -0.27
TUBB4B-202ENST00000604929 TMEM101Q96IK0 257 aa13.34□□□□□ -0.27
TUBB4B-202ENST00000604929 IGHV3-64A0A075B6Q5 118 aa13.34□□□□□ -0.27
TUBB4B-202ENST00000604929 MPV17L2Q567V2 206 aa13.34□□□□□ -0.27
TUBB4B-202ENST00000604929 TRAV13-1A0A0B4J241 112 aa13.33□□□□□ -0.28
TUBB4B-202ENST00000604929 TMEM262E9PQX1 116 aa13.33□□□□□ -0.28
TUBB4B-202ENST00000604929 DLEU1O43261 78 aa13.33□□□□□ -0.28
TUBB4B-202ENST00000604929 UBE2D1P51668 147 aa13.33□□□□□ -0.28
TUBB4B-202ENST00000604929 C11orf68Q9H3H3 251 aaKnown RBP13.33□□□□□ -0.28
TUBB4B-202ENST00000604929 IGLV4-60A0A075B6I1 120 aa13.32□□□□□ -0.28
TUBB4B-202ENST00000604929 NANOS2P60321 138 aaKnown RBP13.32□□□□□ -0.28
TUBB4B-202ENST00000604929 TMEM97Q5BJF2 176 aa13.32□□□□□ -0.28
TUBB4B-202ENST00000604929 H7C423 109 aa13.32□□□□□ -0.28
TUBB4B-202ENST00000604929 HERVK_113P61574 105 aa13.32□□□□□ -0.28
TUBB4B-202ENST00000604929 LURAP1LQ8IV03 231 aa13.32□□□□□ -0.28
TUBB4B-202ENST00000604929 SPATA25Q9BR10 227 aa13.32□□□□□ -0.28
TUBB4B-202ENST00000604929 SMAGPQ0VAQ4 97 aa13.31□□□□□ -0.28
TUBB4B-202ENST00000604929 IGKV3OR2-268A0A0C4DH90 116 aa13.3□□□□□ -0.28
TUBB4B-202ENST00000604929 TINCRA0A1B0GVN0 87 aa13.3□□□□□ -0.28
TUBB4B-202ENST00000604929 TMEM223A0PJW6 202 aa13.3□□□□□ -0.28
TUBB4B-202ENST00000604929 COX6A2Q02221 97 aa13.3□□□□□ -0.28
TUBB4B-202ENST00000604929 MRPL23Q16540 153 aaKnown RBP13.3□□□□□ -0.28
TUBB4B-202ENST00000604929 C11orf45Q8TAV5 145 aa13.3□□□□□ -0.28
TUBB4B-202ENST00000604929 GEMIN7Q9H840 131 aaKnown RBP13.3□□□□□ -0.28
TUBB4B-202ENST00000604929 TM2D3Q9BRN9 247 aa13.3□□□□□ -0.28
TUBB4B-202ENST00000604929 LINC00469Q8N7U9 141 aa13.29□□□□□ -0.28
TUBB4B-202ENST00000604929 ICOSQ9Y6W8 199 aa13.29□□□□□ -0.28
TUBB4B-202ENST00000604929 HUWE1Q7Z6Z7 4374 aaKnown RBP13.28□□□□□ -0.28
TUBB4B-202ENST00000604929 MYMXA0A1B0GTQ4 84 aa13.28□□□□□ -0.28
TUBB4B-202ENST00000604929 SIVA1O15304 175 aa13.28□□□□□ -0.28
TUBB4B-202ENST00000604929 ZNF25P17030 456 aaPredicted RBP13.28□□□□□ -0.28
TUBB4B-202ENST00000604929 TSPEAR-AS2P59090 65 aa13.28□□□□□ -0.28
TUBB4B-202ENST00000604929 LINC00242Q5T6M2 205 aa13.28□□□□□ -0.28
TUBB4B-202ENST00000604929 TRAV8-3A0A0A6YYJ7 113 aa13.27□□□□□ -0.28
TUBB4B-202ENST00000604929 CDKN2A-AS1Q9UH64 79 aa13.27□□□□□ -0.28
TUBB4B-202ENST00000604929 ZNF815PA8K554 130 aa13.27□□□□□ -0.29
TUBB4B-202ENST00000604929 SPINK8P0C7L1 97 aa13.26□□□□□ -0.29
TUBB4B-202ENST00000604929 J3QQQ9 107 aa13.25□□□□□ -0.29
TUBB4B-202ENST00000604929 RBX1P62877 108 aa13.25□□□□□ -0.29
TUBB4B-202ENST00000604929 BVES-AS1Q5T3Y7 98 aa13.25□□□□□ -0.29
TUBB4B-202ENST00000604929 TIRAPP58753 221 aa13.24□□□□□ -0.29
TUBB4B-202ENST00000604929 Q8N3U1 123 aa13.24□□□□□ -0.29
TUBB4B-202ENST00000604929 DEFB131BA0A096LNP1 70 aa13.23□□□□□ -0.29
TUBB4B-202ENST00000604929 LEPROTO15243 131 aa13.23□□□□□ -0.29
TUBB4B-202ENST00000604929 LGALS3P17931 250 aaKnown RBP13.23□□□□□ -0.29
TUBB4B-202ENST00000604929 LBHQ53QV2 105 aaPredicted RBP13.23□□□□□ -0.29
TUBB4B-202ENST00000604929 PLEKHB2Q96CS7 222 aa13.23□□□□□ -0.29
TUBB4B-202ENST00000604929 IGHV3-30-3P0DP02 117 aa13.23□□□□□ -0.29
TUBB4B-202ENST00000604929 HERVK_113P63121 156 aa13.23□□□□□ -0.29
TUBB4B-202ENST00000604929 SCGB1D4Q6XE38 83 aa13.22□□□□□ -0.29
TUBB4B-202ENST00000604929 CLPSL2Q6UWE3 100 aa13.22□□□□□ -0.29
TUBB4B-202ENST00000604929 LYPD5Q6UWN5 251 aa13.22□□□□□ -0.29
TUBB4B-202ENST00000604929 HIGD1BQ9P298 99 aa13.22□□□□□ -0.29
TUBB4B-202ENST00000604929 DNHD1Q96M86 4753 aa13.21□□□□□ -0.29
TUBB4B-202ENST00000604929 A0A1B0GUV1 79 aa13.21□□□□□ -0.29
TUBB4B-202ENST00000604929 SEC11AP67812 179 aa13.21□□□□□ -0.29
TUBB4B-202ENST00000604929 SH2D6Q7Z4S9 175 aa13.21□□□□□ -0.29
TUBB4B-202ENST00000604929 IGHV1-58A0A0C4DH39 117 aa13.2□□□□□ -0.3
TUBB4B-202ENST00000604929 FAM19A3Q7Z5A8 133 aa13.2□□□□□ -0.3
TUBB4B-202ENST00000604929 IGLV5-45A0A087WSX0 123 aa13.2□□□□□ -0.3
TUBB4B-202ENST00000604929 A0A1B0GV90 55 aa13.2□□□□□ -0.3
TUBB4B-202ENST00000604929 H3BRM9 83 aa13.2□□□□□ -0.3
TUBB4B-202ENST00000604929 HSD52Q0P140 79 aa13.2□□□□□ -0.3
TUBB4B-202ENST00000604929 COL5A1-AS1Q5SY13 56 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms