RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 CDC42SE2Q9NRR3 84 aa10.27□□□□□ -0.77
CCDC12-210ENST00000604181 TRBV6-5A0A0K0K1A5 114 aa10.26□□□□□ -0.77
CCDC12-210ENST00000604181 LOC107984640A0A0U1RRK4 108 aa10.26□□□□□ -0.77
CCDC12-210ENST00000604181 RGS21Q2M5E4 152 aa10.26□□□□□ -0.77
CCDC12-210ENST00000604181 TMEM101Q96IK0 257 aa10.26□□□□□ -0.77
CCDC12-210ENST00000604181 BTF3L4Q96K17 158 aa10.26□□□□□ -0.77
CCDC12-210ENST00000604181 BIN3Q9NQY0 253 aa10.26□□□□□ -0.77
CCDC12-210ENST00000604181 BATF3Q9NR55 127 aa10.26□□□□□ -0.77
CCDC12-210ENST00000604181 PKIGQ9Y2B9 76 aa10.26□□□□□ -0.77
CCDC12-210ENST00000604181 EIF5AP63241 154 aaKnown RBP10.25□□□□□ -0.77
CCDC12-210ENST00000604181 C9orf116Q5BN46 136 aaPredicted RBP10.25□□□□□ -0.77
CCDC12-210ENST00000604181 PHF5AQ7RTV0 110 aaKnown RBP10.25□□□□□ -0.77
CCDC12-210ENST00000604181 PRR26Q8N8Z3 221 aa10.25□□□□□ -0.77
CCDC12-210ENST00000604181 NUP35Q8NFH5 326 aa10.25□□□□□ -0.77
CCDC12-210ENST00000604181 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.24□□□□□ -0.77
CCDC12-210ENST00000604181 SS18Q15532 418 aa10.24□□□□□ -0.77
CCDC12-210ENST00000604181 MRPL52Q86TS9 123 aaKnown RBP10.24□□□□□ -0.77
CCDC12-210ENST00000604181 MRAP2Q96G30 205 aa10.24□□□□□ -0.77
CCDC12-210ENST00000604181 POLR2KP53803 58 aaKnown RBP10.23□□□□□ -0.77
CCDC12-210ENST00000604181 RNASE13Q5GAN3 156 aaKnown RBP10.23□□□□□ -0.77
CCDC12-210ENST00000604181 TEX261Q6UWH6 196 aa10.23□□□□□ -0.77
CCDC12-210ENST00000604181 KRTAP11-1Q8IUC1 163 aa10.23□□□□□ -0.77
CCDC12-210ENST00000604181 ZNF664Q8N3J9 261 aa10.23□□□□□ -0.77
CCDC12-210ENST00000604181 MT-ND6P03923 174 aa10.22□□□□□ -0.77
CCDC12-210ENST00000604181 C1orf137Q5JT78 98 aa10.22□□□□□ -0.77
CCDC12-210ENST00000604181 SMIM15Q7Z3B0 74 aa10.22□□□□□ -0.77
CCDC12-210ENST00000604181 APOMO95445 188 aa10.21□□□□□ -0.77
CCDC12-210ENST00000604181 EIF5AL1Q6IS14 154 aaKnown RBP10.21□□□□□ -0.77
CCDC12-210ENST00000604181 OPRPNQ99935 248 aaPredicted RBP10.21□□□□□ -0.77
CCDC12-210ENST00000604181 ST20Q9HBF5 79 aa10.21□□□□□ -0.77
CCDC12-210ENST00000604181 TEX46H3BTG2 121 aa10.2□□□□□ -0.78
CCDC12-210ENST00000604181 RPL18AQ02543 176 aaKnown RBP10.2□□□□□ -0.78
CCDC12-210ENST00000604181 CAMK2N2Q96S95 79 aa10.2□□□□□ -0.78
CCDC12-210ENST00000604181 TRBV27A0A0K0K1C4 114 aa10.19□□□□□ -0.78
CCDC12-210ENST00000604181 C7orf77A4D0Y5 90 aa10.19□□□□□ -0.78
CCDC12-210ENST00000604181 COX7A2LO14548 114 aa10.19□□□□□ -0.78
CCDC12-210ENST00000604181 GATCO43716 136 aaKnown RBP10.19□□□□□ -0.78
CCDC12-210ENST00000604181 MALP21145 153 aa10.19□□□□□ -0.78
CCDC12-210ENST00000604181 C5orf38Q86SI9 138 aa10.19□□□□□ -0.78
CCDC12-210ENST00000604181 ISOC2Q96AB3 205 aa10.19□□□□□ -0.78
CCDC12-210ENST00000604181 TRAV13-1A0A0B4J241 112 aa10.17□□□□□ -0.78
CCDC12-210ENST00000604181 FAM168BA1KXE4 195 aa10.17□□□□□ -0.78
CCDC12-210ENST00000604181 SMKR1H3BMG3 65 aa10.17□□□□□ -0.78
CCDC12-210ENST00000604181 IGLV7-43P04211 117 aa10.17□□□□□ -0.78
CCDC12-210ENST00000604181 RAB4AP20338 218 aa10.17□□□□□ -0.78
CCDC12-210ENST00000604181 C2orf48Q96LS8 159 aa10.17□□□□□ -0.78
CCDC12-210ENST00000604181 UBE2D4Q9Y2X8 147 aa10.17□□□□□ -0.78
CCDC12-210ENST00000604181 C1orf196B1AJZ1 125 aa10.16□□□□□ -0.78
CCDC12-210ENST00000604181 Q6ZUT4 128 aa10.16□□□□□ -0.78
CCDC12-210ENST00000604181 AMN1Q8IY45 258 aa10.16□□□□□ -0.78
CCDC12-210ENST00000604181 A8MWL6 223 aa10.15□□□□□ -0.78
CCDC12-210ENST00000604181 KRTAP1-4P0C5Y4 121 aa10.15□□□□□ -0.78
CCDC12-210ENST00000604181 SPAG11BQ08648 103 aa10.15□□□□□ -0.78
CCDC12-210ENST00000604181 FAM231DQ6ZW35 169 aa10.15□□□□□ -0.78
CCDC12-210ENST00000604181 TMEM191AQ9H0A3 160 aa10.15□□□□□ -0.78
CCDC12-210ENST00000604181 H0Y9J4 135 aa10.14□□□□□ -0.79
CCDC12-210ENST00000604181 KRTAP7-1Q8IUC3 87 aa10.14□□□□□ -0.79
CCDC12-210ENST00000604181 DIRC1Q969H9 104 aa10.14□□□□□ -0.79
CCDC12-210ENST00000604181 HIGD1CA8MV81 97 aa10.13□□□□□ -0.79
CCDC12-210ENST00000604181 C10orf25Q5T742 122 aa10.13□□□□□ -0.79
CCDC12-210ENST00000604181 NRACQ8N912 160 aa10.13□□□□□ -0.79
CCDC12-210ENST00000604181 FAM104AQ969W3 186 aa10.13□□□□□ -0.79
CCDC12-210ENST00000604181 FAM210AQ96ND0 272 aa10.13□□□□□ -0.79
CCDC12-210ENST00000604181 CSDC2Q9Y534 153 aaKnown RBP10.13□□□□□ -0.79
CCDC12-210ENST00000604181 A0A087WZ39 114 aa10.12□□□□□ -0.79
CCDC12-210ENST00000604181 A0A1B0GUT8 65 aa10.12□□□□□ -0.79
CCDC12-210ENST00000604181 CT83Q5H943 113 aa10.12□□□□□ -0.79
CCDC12-210ENST00000604181 FCER1GP30273 86 aa10.11□□□□□ -0.79
CCDC12-210ENST00000604181 TAGLN2P37802 199 aaKnown RBP10.11□□□□□ -0.79
CCDC12-210ENST00000604181 RNF151Q2KHN1 245 aa10.11□□□□□ -0.79
CCDC12-210ENST00000604181 KRTAP9-2Q9BYQ4 174 aa10.11□□□□□ -0.79
CCDC12-210ENST00000604181 VCYO14598 125 aa10.1□□□□□ -0.79
CCDC12-210ENST00000604181 FAM19A5Q7Z5A7 132 aaPredicted RBP10.1□□□□□ -0.79
CCDC12-210ENST00000604181 TSKUQ8WUA8 353 aa10.1□□□□□ -0.79
CCDC12-210ENST00000604181 MRPL35Q9NZE8 188 aaKnown RBP10.1□□□□□ -0.79
CCDC12-210ENST00000604181 TMEM250H0YL14 139 aa10.09□□□□□ -0.79
CCDC12-210ENST00000604181 ORAOV1Q8WV07 137 aa10.09□□□□□ -0.79
CCDC12-210ENST00000604181 FAT4Q6V0I7 4981 aa10.08□□□□□ -0.8
CCDC12-210ENST00000604181 IGLV1-50A0A075B6I6 118 aa10.08□□□□□ -0.8
CCDC12-210ENST00000604181 CEBPGP53567 150 aa10.08□□□□□ -0.8
CCDC12-210ENST00000604181 SUMO2P61956 95 aaKnown RBP10.08□□□□□ -0.8
CCDC12-210ENST00000604181 RPL39P62891 51 aaKnown RBP10.08□□□□□ -0.8
CCDC12-210ENST00000604181 PRR4Q16378 134 aa10.08□□□□□ -0.8
CCDC12-210ENST00000604181 UNQ6190/PRO20217Q6UXQ8 127 aa10.08□□□□□ -0.8
CCDC12-210ENST00000604181 SLC51BQ86UW2 128 aa10.08□□□□□ -0.8
CCDC12-210ENST00000604181 OR10D4PQ8NGN7 298 aa10.08□□□□□ -0.8
CCDC12-210ENST00000604181 BORCS7Q96B45 105 aa10.08□□□□□ -0.8
CCDC12-210ENST00000604181 C6orf48Q9UBA6 75 aa10.08□□□□□ -0.8
CCDC12-210ENST00000604181 IGHV3OR16-9A0A0B4J2B5 98 aa10.07□□□□□ -0.8
CCDC12-210ENST00000604181 TIMM21Q9BVV7 248 aa10.07□□□□□ -0.8
CCDC12-210ENST00000604181 GAGE2EQ4V326 116 aa10.06□□□□□ -0.8
CCDC12-210ENST00000604181 LINC01551Q86U37 167 aa10.06□□□□□ -0.8
CCDC12-210ENST00000604181 GAGE2DQ9UEU5 116 aa10.06□□□□□ -0.8
CCDC12-210ENST00000604181 TLX1NBP0CAT3 122 aa10.05□□□□□ -0.8
CCDC12-210ENST00000604181 IMMP2LQ96T52 175 aa10.05□□□□□ -0.8
CCDC12-210ENST00000604181 KIR2DL4Q99706 377 aa10.05□□□□□ -0.8
CCDC12-210ENST00000604181 NDUFA1O15239 70 aa10.04□□□□□ -0.8
CCDC12-210ENST00000604181 MRPL51Q4U2R6 128 aaKnown RBP10.04□□□□□ -0.8
CCDC12-210ENST00000604181 SMDT1Q9H4I9 107 aa10.04□□□□□ -0.8
CCDC12-210ENST00000604181 OSTCQ9NRP0 149 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms