RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-204ENST00000602492 RBX1P62877 108 aa13.01□□□□□ -0.33
PPFIA3-204ENST00000602492 CLPSL2Q6UWE3 100 aa13.01□□□□□ -0.33
PPFIA3-204ENST00000602492 NTM-AS1Q6ZSK4 140 aa13.01□□□□□ -0.33
PPFIA3-204ENST00000602492 AMN1Q8IY45 258 aa13.01□□□□□ -0.33
PPFIA3-204ENST00000602492 RNF185Q96GF1 192 aa13.01□□□□□ -0.33
PPFIA3-204ENST00000602492 PRR34Q9NV39 138 aa13.01□□□□□ -0.33
PPFIA3-204ENST00000602492 LAMTOR2Q9Y2Q5 125 aa13.01□□□□□ -0.33
PPFIA3-204ENST00000602492 GAGE6Q13070 117 aa13□□□□□ -0.33
PPFIA3-204ENST00000602492 LINC00269Q8N2A0 174 aa13□□□□□ -0.33
PPFIA3-204ENST00000602492 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13□□□□□ -0.33
PPFIA3-204ENST00000602492 TRBV25-1A0A075B6N4 114 aa12.99□□□□□ -0.33
PPFIA3-204ENST00000602492 H7C1H1 209 aa12.99□□□□□ -0.33
PPFIA3-204ENST00000602492 PHOX2AO14813 284 aa12.99□□□□□ -0.33
PPFIA3-204ENST00000602492 FABP9Q0Z7S8 132 aa12.99□□□□□ -0.33
PPFIA3-204ENST00000602492 ORMDL3Q8N138 153 aa12.99□□□□□ -0.33
PPFIA3-204ENST00000602492 TRGC2P03986 189 aa12.98□□□□□ -0.33
PPFIA3-204ENST00000602492 MRPL51Q4U2R6 128 aaKnown RBP12.98□□□□□ -0.33
PPFIA3-204ENST00000602492 KRTAP26-1Q6PEX3 210 aa12.98□□□□□ -0.33
PPFIA3-204ENST00000602492 C1orf196B1AJZ1 125 aa12.96□□□□□ -0.33
PPFIA3-204ENST00000602492 PANO1I0J062 215 aa12.96□□□□□ -0.33
PPFIA3-204ENST00000602492 MGPP08493 103 aa12.96□□□□□ -0.33
PPFIA3-204ENST00000602492 CKS2P33552 79 aa12.96□□□□□ -0.33
PPFIA3-204ENST00000602492 SDIM1Q6ZPB5 146 aa12.96□□□□□ -0.33
PPFIA3-204ENST00000602492 IGHV1-24A0A0C4DH33 117 aa12.95□□□□□ -0.34
PPFIA3-204ENST00000602492 IQCJQ1A5X6 159 aa12.95□□□□□ -0.34
PPFIA3-204ENST00000602492 IGLV10-54A0A075B6I4 117 aa12.94□□□□□ -0.34
PPFIA3-204ENST00000602492 D6R8Y8 96 aa12.94□□□□□ -0.34
PPFIA3-204ENST00000602492 M0QY20 66 aa12.94□□□□□ -0.34
PPFIA3-204ENST00000602492 REG3AQ06141 175 aa12.94□□□□□ -0.34
PPFIA3-204ENST00000602492 SUMO4Q6EEV6 95 aa12.94□□□□□ -0.34
PPFIA3-204ENST00000602492 ALKBH7Q9BT30 221 aaPredicted RBP12.94□□□□□ -0.34
PPFIA3-204ENST00000602492 TRBV6-5A0A0K0K1A5 114 aa12.93□□□□□ -0.34
PPFIA3-204ENST00000602492 CNBPP62633 177 aaKnown RBP12.93□□□□□ -0.34
PPFIA3-204ENST00000602492 PRELID3AQ96N28 172 aa12.93□□□□□ -0.34
PPFIA3-204ENST00000602492 hDV102S1A0JD36 115 aa12.92□□□□□ -0.34
PPFIA3-204ENST00000602492 RAB5BP61020 215 aa12.92□□□□□ -0.34
PPFIA3-204ENST00000602492 RPL32P62910 135 aaKnown RBP12.92□□□□□ -0.34
PPFIA3-204ENST00000602492 C20orf78Q9BR46 151 aa12.92□□□□□ -0.34
PPFIA3-204ENST00000602492 TRAV8-4A0A0B4J246 113 aa12.91□□□□□ -0.34
PPFIA3-204ENST00000602492 PRSS47A8MTI9 375 aa12.91□□□□□ -0.34
PPFIA3-204ENST00000602492 CIRBPQ14011 172 aaKnown RBP12.91□□□□□ -0.34
PPFIA3-204ENST00000602492 Q6ZRU5 148 aa12.91□□□□□ -0.34
PPFIA3-204ENST00000602492 NRACQ8N912 160 aa12.91□□□□□ -0.34
PPFIA3-204ENST00000602492 NIT2Q9NQR4 276 aa12.91□□□□□ -0.34
PPFIA3-204ENST00000602492 AP5S1Q9NUS5 200 aa12.91□□□□□ -0.34
PPFIA3-204ENST00000602492 KIAA1644Q3SXP7 199 aa12.9□□□□□ -0.34
PPFIA3-204ENST00000602492 C20orf203Q8NBC4 194 aa12.9□□□□□ -0.34
PPFIA3-204ENST00000602492 IGHV3-64A0A075B6Q5 118 aa12.89□□□□□ -0.35
PPFIA3-204ENST00000602492 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.89□□□□□ -0.35
PPFIA3-204ENST00000602492 TRAV26-2A0A0B4J265 109 aa12.89□□□□□ -0.35
PPFIA3-204ENST00000602492 HIST1H2BKO60814 126 aa12.89□□□□□ -0.35
PPFIA3-204ENST00000602492 TNFRSF6BO95407 300 aa12.89□□□□□ -0.35
PPFIA3-204ENST00000602492 HIST1H2BJP06899 126 aa12.89□□□□□ -0.35
PPFIA3-204ENST00000602492 MT1HL1P0DM35 61 aa12.89□□□□□ -0.35
PPFIA3-204ENST00000602492 HIST1H2BOP23527 126 aa12.89□□□□□ -0.35
PPFIA3-204ENST00000602492 HIST1H2BBP33778 126 aa12.89□□□□□ -0.35
PPFIA3-204ENST00000602492 HIST1H2BDP58876 126 aa12.89□□□□□ -0.35
PPFIA3-204ENST00000602492 HIST1H2BCP62807 126 aa12.89□□□□□ -0.35
PPFIA3-204ENST00000602492 HIST2H2BEQ16778 126 aa12.89□□□□□ -0.35
PPFIA3-204ENST00000602492 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.89□□□□□ -0.35
PPFIA3-204ENST00000602492 HIST1H2BHQ93079 126 aa12.89□□□□□ -0.35
PPFIA3-204ENST00000602492 DPH3Q96FX2 82 aa12.89□□□□□ -0.35
PPFIA3-204ENST00000602492 HIST1H2BNQ99877 126 aa12.89□□□□□ -0.35
PPFIA3-204ENST00000602492 HIST1H2BMQ99879 126 aa12.89□□□□□ -0.35
PPFIA3-204ENST00000602492 TMEM243Q9BU79 118 aa12.89□□□□□ -0.35
PPFIA3-204ENST00000602492 A0A1B0GUV1 79 aa12.88□□□□□ -0.35
PPFIA3-204ENST00000602492 NCR2O95944 276 aa12.88□□□□□ -0.35
PPFIA3-204ENST00000602492 SUMO2P61956 95 aaKnown RBP12.88□□□□□ -0.35
PPFIA3-204ENST00000602492 MAP1LC3AQ9H492 121 aa12.88□□□□□ -0.35
PPFIA3-204ENST00000602492 K7EMI3 77 aa12.87□□□□□ -0.35
PPFIA3-204ENST00000602492 NPYP01303 97 aa12.87□□□□□ -0.35
PPFIA3-204ENST00000602492 C18orf32Q8TCD1 76 aa12.87□□□□□ -0.35
PPFIA3-204ENST00000602492 IGLV4-60A0A075B6I1 120 aa12.86□□□□□ -0.35
PPFIA3-204ENST00000602492 SMKR1H3BMG3 65 aa12.86□□□□□ -0.35
PPFIA3-204ENST00000602492 TCAPO15273 167 aa12.86□□□□□ -0.35
PPFIA3-204ENST00000602492 ST20Q9HBF5 79 aa12.86□□□□□ -0.35
PPFIA3-204ENST00000602492 NXT2Q9NPJ8 142 aaKnown RBP12.86□□□□□ -0.35
PPFIA3-204ENST00000602492 A0A087WYN8 130 aa12.85□□□□□ -0.35
PPFIA3-204ENST00000602492 PMCHP20382 165 aa12.85□□□□□ -0.35
PPFIA3-204ENST00000602492 COA6Q5JTJ3 125 aaKnown RBP12.85□□□□□ -0.35
PPFIA3-204ENST00000602492 TRBV27A0A0K0K1C4 114 aa12.84□□□□□ -0.35
PPFIA3-204ENST00000602492 UBE2L6O14933 153 aa12.84□□□□□ -0.35
PPFIA3-204ENST00000602492 GAS8-AS1O95177 125 aa12.84□□□□□ -0.35
PPFIA3-204ENST00000602492 SLPIP03973 132 aa12.84□□□□□ -0.35
PPFIA3-204ENST00000602492 CHTF8P0CG12 524 aa12.84□□□□□ -0.35
PPFIA3-204ENST00000602492 POLR2KP53803 58 aaKnown RBP12.84□□□□□ -0.35
PPFIA3-204ENST00000602492 RPL39LQ96EH5 51 aaKnown RBP12.84□□□□□ -0.35
PPFIA3-204ENST00000602492 SMIM2Q9BVW6 85 aa12.84□□□□□ -0.35
PPFIA3-204ENST00000602492 SDHAF1A6NFY7 115 aa12.83□□□□□ -0.36
PPFIA3-204ENST00000602492 SPACA4Q8TDM5 124 aa12.83□□□□□ -0.36
PPFIA3-204ENST00000602492 TNXBP22105 4242 aa12.83□□□□□ -0.36
PPFIA3-204ENST00000602492 LINC01546A6NGU7 62 aa12.82□□□□□ -0.36
PPFIA3-204ENST00000602492 VCYO14598 125 aa12.82□□□□□ -0.36
PPFIA3-204ENST00000602492 Q8N8P6 123 aa12.82□□□□□ -0.36
PPFIA3-204ENST00000602492 COTL1Q14019 142 aa12.81□□□□□ -0.36
PPFIA3-204ENST00000602492 CHCHD1Q96BP2 118 aaKnown RBP12.81□□□□□ -0.36
PPFIA3-204ENST00000602492 AMTP48728 403 aa12.8□□□□□ -0.36
PPFIA3-204ENST00000602492 CFAP161Q6P656 301 aa12.8□□□□□ -0.36
PPFIA3-204ENST00000602492 BAGE3Q86Y29 109 aa12.8□□□□□ -0.36
PPFIA3-204ENST00000602492 PRSS3P2Q8NHM4 247 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms