RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 DEFB130AP0DP74 79 aa12.06□□□□□ -0.48
SHKBP1-216ENST00000598201 SCGB1A1P11684 91 aa12.06□□□□□ -0.48
SHKBP1-216ENST00000598201 HSD52Q0P140 79 aa12.06□□□□□ -0.48
SHKBP1-216ENST00000598201 TMEM170BQ5T4T1 132 aa12.06□□□□□ -0.48
SHKBP1-216ENST00000598201 KIR2DL5BQ8NHK3 375 aa12.06□□□□□ -0.48
SHKBP1-216ENST00000598201 CHAC1Q9BUX1 264 aa12.06□□□□□ -0.48
SHKBP1-216ENST00000598201 SPANXA1Q9NS26 97 aa12.06□□□□□ -0.48
SHKBP1-216ENST00000598201 HIGD1BQ9P298 99 aa12.06□□□□□ -0.48
SHKBP1-216ENST00000598201 TRGV4A0A0C4DH28 118 aa12.06□□□□□ -0.48
SHKBP1-216ENST00000598201 A0A0J9YXV3 536 aa12.06□□□□□ -0.48
SHKBP1-216ENST00000598201 LINC00612Q8N6U2 182 aa12.06□□□□□ -0.48
SHKBP1-216ENST00000598201 TRBV6-4A0A1B0GX49 114 aa12.05□□□□□ -0.48
SHKBP1-216ENST00000598201 SAMD5Q5TGI4 173 aa12.05□□□□□ -0.48
SHKBP1-216ENST00000598201 DAZ4Q86SG3 579 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-216ENST00000598201 DAZ3Q9NR90 486 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-216ENST00000598201 SMIM9A6NGZ8 99 aa12.04□□□□□ -0.48
SHKBP1-216ENST00000598201 Q6ZUT4 128 aa12.04□□□□□ -0.48
SHKBP1-216ENST00000598201 MYMXA0A1B0GTQ4 84 aa12.04□□□□□ -0.48
SHKBP1-216ENST00000598201 APOC4P55056 127 aa12.04□□□□□ -0.48
SHKBP1-216ENST00000598201 LINC00694P0DN24 101 aa12.03□□□□□ -0.48
SHKBP1-216ENST00000598201 CRYBA4P53673 196 aa12.03□□□□□ -0.48
SHKBP1-216ENST00000598201 TAX1BP3O14907 124 aa12.02□□□□□ -0.48
SHKBP1-216ENST00000598201 IGHV4-30-4P0DP06 118 aa12.02□□□□□ -0.48
SHKBP1-216ENST00000598201 ZNF22P17026 224 aaPredicted RBP12.02□□□□□ -0.48
SHKBP1-216ENST00000598201 TSPEAR-AS2P59090 65 aa12.02□□□□□ -0.48
SHKBP1-216ENST00000598201 DEFB4AO15263 64 aa12.02□□□□□ -0.49
SHKBP1-216ENST00000598201 HERVK_113P61574 105 aa12.02□□□□□ -0.49
SHKBP1-216ENST00000598201 TMEM223A0PJW6 202 aa12.01□□□□□ -0.49
SHKBP1-216ENST00000598201 SEC11AP67812 179 aa12.01□□□□□ -0.49
SHKBP1-216ENST00000598201 MRPS36P82909 103 aaKnown RBP12.01□□□□□ -0.49
SHKBP1-216ENST00000598201 FAM222AQ5U5X8 452 aa12.01□□□□□ -0.49
SHKBP1-216ENST00000598201 SBSPONQ8IVN8 264 aa12.01□□□□□ -0.49
SHKBP1-216ENST00000598201 ZNF815PA8K554 130 aa12□□□□□ -0.49
SHKBP1-216ENST00000598201 EGFEM1PQ0D2K5 195 aa12□□□□□ -0.49
SHKBP1-216ENST00000598201 KRTAP10-11P60412 298 aa11.99□□□□□ -0.49
SHKBP1-216ENST00000598201 TIMM21Q9BVV7 248 aa11.99□□□□□ -0.49
SHKBP1-216ENST00000598201 IGHV4-28A0A0C4DH34 117 aa11.99□□□□□ -0.49
SHKBP1-216ENST00000598201 A0A1B0GV72 72 aa11.99□□□□□ -0.49
SHKBP1-216ENST00000598201 GCSHP23434 173 aa11.99□□□□□ -0.49
SHKBP1-216ENST00000598201 PLEKHB2Q96CS7 222 aa11.99□□□□□ -0.49
SHKBP1-216ENST00000598201 FXYD2P54710 66 aa11.98□□□□□ -0.49
SHKBP1-216ENST00000598201 GTSF1LQ9H1H1 148 aa11.98□□□□□ -0.49
SHKBP1-216ENST00000598201 NBEAL1Q6ZS30 2694 aa11.98□□□□□ -0.49
SHKBP1-216ENST00000598201 NOTCH1P46531 2555 aa11.98□□□□□ -0.49
SHKBP1-216ENST00000598201 IGHV3-64A0A075B6Q5 118 aa11.98□□□□□ -0.49
SHKBP1-216ENST00000598201 DGAT2L7PQ6IED9 249 aa11.98□□□□□ -0.49
SHKBP1-216ENST00000598201 KPRPQ5T749 579 aaPredicted RBP11.97□□□□□ -0.49
SHKBP1-216ENST00000598201 LYRM9A8MSI8 78 aa11.96□□□□□ -0.49
SHKBP1-216ENST00000598201 J3QQQ9 107 aa11.96□□□□□ -0.49
SHKBP1-216ENST00000598201 UBE2D1P51668 147 aa11.96□□□□□ -0.49
SHKBP1-216ENST00000598201 Q8NAQ8 132 aa11.96□□□□□ -0.49
SHKBP1-216ENST00000598201 TINCRA0A1B0GVN0 87 aa11.96□□□□□ -0.5
SHKBP1-216ENST00000598201 CEND1Q8N111 149 aa11.96□□□□□ -0.5
SHKBP1-216ENST00000598201 TMEM243Q9BU79 118 aa11.96□□□□□ -0.5
SHKBP1-216ENST00000598201 A6NDN8 102 aa11.95□□□□□ -0.5
SHKBP1-216ENST00000598201 RNF183Q96D59 192 aa11.95□□□□□ -0.5
SHKBP1-216ENST00000598201 TM2D2Q9BX73 214 aa11.95□□□□□ -0.5
SHKBP1-216ENST00000598201 LEPROTO15243 131 aa11.95□□□□□ -0.5
SHKBP1-216ENST00000598201 HIST1H4GQ99525 98 aa11.95□□□□□ -0.5
SHKBP1-216ENST00000598201 CELA1Q9UNI1 258 aa11.95□□□□□ -0.5
SHKBP1-216ENST00000598201 CSDC2Q9Y534 153 aaKnown RBP11.95□□□□□ -0.5
SHKBP1-216ENST00000598201 SCGB1D4Q6XE38 83 aa11.94□□□□□ -0.5
SHKBP1-216ENST00000598201 TRAV8-3A0A0A6YYJ7 113 aa11.93□□□□□ -0.5
SHKBP1-216ENST00000598201 MIFP14174 115 aa11.93□□□□□ -0.5
SHKBP1-216ENST00000598201 GYPEP15421 78 aa11.93□□□□□ -0.5
SHKBP1-216ENST00000598201 TAL2Q16559 108 aa11.93□□□□□ -0.5
SHKBP1-216ENST00000598201 AMMECR1LQ6DCA0 310 aa11.93□□□□□ -0.5
SHKBP1-216ENST00000598201 LGALS3P17931 250 aaKnown RBP11.93□□□□□ -0.5
SHKBP1-216ENST00000598201 CDC42SE2Q9NRR3 84 aa11.93□□□□□ -0.5
SHKBP1-216ENST00000598201 TRBV6-8A0A0A6YYG3 113 aa11.92□□□□□ -0.5
SHKBP1-216ENST00000598201 PRB2P02812 416 aaPredicted RBP11.92□□□□□ -0.5
SHKBP1-216ENST00000598201 A0A0J9YY99 117 aa11.91□□□□□ -0.5
SHKBP1-216ENST00000598201 H3BRM9 83 aa11.91□□□□□ -0.5
SHKBP1-216ENST00000598201 UBE2L6O14933 153 aa11.91□□□□□ -0.5
SHKBP1-216ENST00000598201 IGHV3-30-3P0DP02 117 aa11.91□□□□□ -0.5
SHKBP1-216ENST00000598201 COX6A2Q02221 97 aa11.91□□□□□ -0.5
SHKBP1-216ENST00000598201 OR5A1Q8NGJ0 315 aa11.91□□□□□ -0.5
SHKBP1-216ENST00000598201 PRO0255Q9UI72 69 aa11.91□□□□□ -0.5
SHKBP1-216ENST00000598201 GAGE6Q13070 117 aa11.91□□□□□ -0.5
SHKBP1-216ENST00000598201 GEMIN7Q9H840 131 aaKnown RBP11.91□□□□□ -0.5
SHKBP1-216ENST00000598201 CDKN2A-AS1Q9UH64 79 aa11.91□□□□□ -0.5
SHKBP1-216ENST00000598201 K7ERJ3 54 aa11.9□□□□□ -0.5
SHKBP1-216ENST00000598201 SPINK8P0C7L1 97 aa11.9□□□□□ -0.5
SHKBP1-216ENST00000598201 DAD1P61803 113 aa11.9□□□□□ -0.5
SHKBP1-216ENST00000598201 LINC00242Q5T6M2 205 aa11.9□□□□□ -0.5
SHKBP1-216ENST00000598201 RAB37Q96AX2 223 aa11.9□□□□□ -0.5
SHKBP1-216ENST00000598201 TIRAPP58753 221 aa11.9□□□□□ -0.51
SHKBP1-216ENST00000598201 GTF2H5Q6ZYL4 71 aa11.9□□□□□ -0.51
SHKBP1-216ENST00000598201 IGLV5-45A0A087WSX0 123 aa11.89□□□□□ -0.51
SHKBP1-216ENST00000598201 TRAV13-1A0A0B4J241 112 aa11.89□□□□□ -0.51
SHKBP1-216ENST00000598201 IGHV1-58A0A0C4DH39 117 aa11.89□□□□□ -0.51
SHKBP1-216ENST00000598201 A8MZ25 164 aa11.89□□□□□ -0.51
SHKBP1-216ENST00000598201 ATP6V0E2Q8NHE4 81 aa11.89□□□□□ -0.51
SHKBP1-216ENST00000598201 NAA38Q9BRA0 125 aaKnown RBP11.89□□□□□ -0.51
SHKBP1-216ENST00000598201 NHP2Q9NX24 153 aaKnown RBP11.89□□□□□ -0.51
SHKBP1-216ENST00000598201 H7C423 109 aa11.88□□□□□ -0.51
SHKBP1-216ENST00000598201 PAX4O43316 350 aa11.88□□□□□ -0.51
SHKBP1-216ENST00000598201 VSIG2Q96IQ7 327 aa11.88□□□□□ -0.51
SHKBP1-216ENST00000598201 DNAH3Q8TD57 4116 aa11.88□□□□□ -0.51
SHKBP1-216ENST00000598201 A0A096LPF7 62 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms