RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 SS18Q15532 418 aa6.08□□□□□ -1.44
LIG1-209ENST00000596104 TEX261Q6UWH6 196 aa6.08□□□□□ -1.44
LIG1-209ENST00000596104 MRPL52Q86TS9 123 aaKnown RBP6.08□□□□□ -1.44
LIG1-209ENST00000596104 TMEM101Q96IK0 257 aa6.08□□□□□ -1.44
LIG1-209ENST00000596104 RNASE7Q9H1E1 156 aaKnown RBP6.08□□□□□ -1.44
LIG1-209ENST00000596104 CDC42SE2Q9NRR3 84 aa6.08□□□□□ -1.44
LIG1-209ENST00000596104 IGLV4-69A0A075B6H9 119 aa6.07□□□□□ -1.44
LIG1-209ENST00000596104 BCL2P10415 239 aa6.07□□□□□ -1.44
LIG1-209ENST00000596104 C9orf116Q5BN46 136 aaPredicted RBP6.07□□□□□ -1.44
LIG1-209ENST00000596104 SMIM15Q7Z3B0 74 aa6.07□□□□□ -1.44
LIG1-209ENST00000596104 ZNF664Q8N3J9 261 aa6.07□□□□□ -1.44
LIG1-209ENST00000596104 NUP35Q8NFH5 326 aa6.07□□□□□ -1.44
LIG1-209ENST00000596104 MRAP2Q96G30 205 aa6.07□□□□□ -1.44
LIG1-209ENST00000596104 BATF3Q9NR55 127 aa6.07□□□□□ -1.44
LIG1-209ENST00000596104 TMEM242Q9NWH2 141 aa6.07□□□□□ -1.44
LIG1-209ENST00000596104 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.06□□□□□ -1.44
LIG1-209ENST00000596104 APOMO95445 188 aa6.06□□□□□ -1.44
LIG1-209ENST00000596104 MT-ND6P03923 174 aa6.06□□□□□ -1.44
LIG1-209ENST00000596104 RGS21Q2M5E4 152 aa6.06□□□□□ -1.44
LIG1-209ENST00000596104 EIF5AL1Q6IS14 154 aaKnown RBP6.06□□□□□ -1.44
LIG1-209ENST00000596104 PRR26Q8N8Z3 221 aa6.06□□□□□ -1.44
LIG1-209ENST00000596104 ISOC2Q96AB3 205 aa6.06□□□□□ -1.44
LIG1-209ENST00000596104 FAM210AQ96ND0 272 aa6.06□□□□□ -1.44
LIG1-209ENST00000596104 TEX46H3BTG2 121 aa6.05□□□□□ -1.44
LIG1-209ENST00000596104 POLR2KP53803 58 aaKnown RBP6.05□□□□□ -1.44
LIG1-209ENST00000596104 C1orf137Q5JT78 98 aa6.05□□□□□ -1.44
LIG1-209ENST00000596104 PHF5AQ7RTV0 110 aaKnown RBP6.05□□□□□ -1.44
LIG1-209ENST00000596104 OCC1Q8TAD7 63 aa6.05□□□□□ -1.44
LIG1-209ENST00000596104 TRBV27A0A0K0K1C4 114 aa6.04□□□□□ -1.44
LIG1-209ENST00000596104 C7orf77A4D0Y5 90 aa6.04□□□□□ -1.44
LIG1-209ENST00000596104 COX7A2LO14548 114 aa6.04□□□□□ -1.44
LIG1-209ENST00000596104 C2orf48Q96LS8 159 aa6.04□□□□□ -1.44
LIG1-209ENST00000596104 CAMK2N2Q96S95 79 aa6.04□□□□□ -1.44
LIG1-209ENST00000596104 ST20Q9HBF5 79 aa6.04□□□□□ -1.44
LIG1-209ENST00000596104 C1orf196B1AJZ1 125 aa6.03□□□□□ -1.44
LIG1-209ENST00000596104 IGLV7-43P04211 117 aa6.03□□□□□ -1.44
LIG1-209ENST00000596104 MALP21145 153 aa6.03□□□□□ -1.44
LIG1-209ENST00000596104 KRTAP11-1Q8IUC1 163 aa6.03□□□□□ -1.44
LIG1-209ENST00000596104 DIRC1Q969H9 104 aa6.03□□□□□ -1.44
LIG1-209ENST00000596104 CSDC2Q9Y534 153 aaKnown RBP6.03□□□□□ -1.44
LIG1-209ENST00000596104 A8MWL6 223 aa6.02□□□□□ -1.45
LIG1-209ENST00000596104 GATCO43716 136 aaKnown RBP6.02□□□□□ -1.45
LIG1-209ENST00000596104 RPL18AQ02543 176 aaKnown RBP6.02□□□□□ -1.45
LIG1-209ENST00000596104 RNF151Q2KHN1 245 aa6.02□□□□□ -1.45
LIG1-209ENST00000596104 FAM231DQ6ZW35 169 aa6.02□□□□□ -1.45
LIG1-209ENST00000596104 C5orf38Q86SI9 138 aa6.02□□□□□ -1.45
LIG1-209ENST00000596104 OPRPNQ99935 248 aaPredicted RBP6.02□□□□□ -1.45
LIG1-209ENST00000596104 UBE2D4Q9Y2X8 147 aa6.02□□□□□ -1.45
LIG1-209ENST00000596104 TRAV13-1A0A0B4J241 112 aa6.01□□□□□ -1.45
LIG1-209ENST00000596104 H0Y9J4 135 aa6.01□□□□□ -1.45
LIG1-209ENST00000596104 KRTAP1-4P0C5Y4 121 aa6.01□□□□□ -1.45
LIG1-209ENST00000596104 RAB4AP20338 218 aa6.01□□□□□ -1.45
LIG1-209ENST00000596104 TAGLN2P37802 199 aaKnown RBP6.01□□□□□ -1.45
LIG1-209ENST00000596104 SPAG11BQ08648 103 aa6.01□□□□□ -1.45
LIG1-209ENST00000596104 RNASE13Q5GAN3 156 aaKnown RBP6.01□□□□□ -1.45
LIG1-209ENST00000596104 CT83Q5H943 113 aa6.01□□□□□ -1.45
LIG1-209ENST00000596104 TMEM191AQ9H0A3 160 aa6.01□□□□□ -1.45
LIG1-209ENST00000596104 IGLV1-50A0A075B6I6 118 aa6□□□□□ -1.45
LIG1-209ENST00000596104 Q6ZUT4 128 aa6□□□□□ -1.45
LIG1-209ENST00000596104 AMN1Q8IY45 258 aa6□□□□□ -1.45
LIG1-209ENST00000596104 KRTAP9-2Q9BYQ4 174 aa6□□□□□ -1.45
LIG1-209ENST00000596104 MRPL35Q9NZE8 188 aaKnown RBP6□□□□□ -1.45
LIG1-209ENST00000596104 MUC2Q02817 5179 aa5.99□□□□□ -1.45
LIG1-209ENST00000596104 A0A087WZ39 114 aa5.99□□□□□ -1.45
LIG1-209ENST00000596104 A0A1B0GUT8 65 aa5.99□□□□□ -1.45
LIG1-209ENST00000596104 FAM168BA1KXE4 195 aa5.99□□□□□ -1.45
LIG1-209ENST00000596104 VCYO14598 125 aa5.99□□□□□ -1.45
LIG1-209ENST00000596104 FCER1GP30273 86 aa5.99□□□□□ -1.45
LIG1-209ENST00000596104 KRTAP7-1Q8IUC3 87 aa5.99□□□□□ -1.45
LIG1-209ENST00000596104 HIGD1CA8MV81 97 aa5.98□□□□□ -1.45
LIG1-209ENST00000596104 TMEM250H0YL14 139 aa5.98□□□□□ -1.45
LIG1-209ENST00000596104 SMKR1H3BMG3 65 aa5.98□□□□□ -1.45
LIG1-209ENST00000596104 SUMO2P61956 95 aaKnown RBP5.98□□□□□ -1.45
LIG1-209ENST00000596104 C10orf25Q5T742 122 aa5.98□□□□□ -1.45
LIG1-209ENST00000596104 NRACQ8N912 160 aa5.98□□□□□ -1.45
LIG1-209ENST00000596104 OR10D4PQ8NGN7 298 aa5.98□□□□□ -1.45
LIG1-209ENST00000596104 TSKUQ8WUA8 353 aa5.98□□□□□ -1.45
LIG1-209ENST00000596104 BORCS7Q96B45 105 aa5.98□□□□□ -1.45
LIG1-209ENST00000596104 TIMM21Q9BVV7 248 aa5.98□□□□□ -1.45
LIG1-209ENST00000596104 IGHV3OR16-9A0A0B4J2B5 98 aa5.97□□□□□ -1.45
LIG1-209ENST00000596104 F8WDY8 70 aa5.97□□□□□ -1.45
LIG1-209ENST00000596104 TLX1NBP0CAT3 122 aa5.97□□□□□ -1.45
LIG1-209ENST00000596104 SMAGPQ0VAQ4 97 aa5.97□□□□□ -1.45
LIG1-209ENST00000596104 PRR4Q16378 134 aa5.97□□□□□ -1.45
LIG1-209ENST00000596104 SLC51BQ86UW2 128 aa5.97□□□□□ -1.45
LIG1-209ENST00000596104 ORAOV1Q8WV07 137 aa5.97□□□□□ -1.45
LIG1-209ENST00000596104 FAM104AQ969W3 186 aa5.97□□□□□ -1.45
LIG1-209ENST00000596104 IMMP2LQ96T52 175 aa5.97□□□□□ -1.45
LIG1-209ENST00000596104 UNQ6190/PRO20217Q6UXQ8 127 aa5.96□□□□□ -1.46
LIG1-209ENST00000596104 FAM19A5Q7Z5A7 132 aaPredicted RBP5.96□□□□□ -1.46
LIG1-209ENST00000596104 KIR2DL4Q99706 377 aa5.96□□□□□ -1.46
LIG1-209ENST00000596104 C6orf48Q9UBA6 75 aa5.96□□□□□ -1.46
LIG1-209ENST00000596104 NDUFA1O15239 70 aa5.95□□□□□ -1.46
LIG1-209ENST00000596104 PPP1R17O96001 155 aa5.95□□□□□ -1.46
LIG1-209ENST00000596104 TMEM241Q24JQ0 296 aa5.95□□□□□ -1.46
LIG1-209ENST00000596104 LINC01551Q86U37 167 aa5.95□□□□□ -1.46
LIG1-209ENST00000596104 SMDT1Q9H4I9 107 aa5.95□□□□□ -1.46
LIG1-209ENST00000596104 A0A0U1RQV1 116 aa5.94□□□□□ -1.46
LIG1-209ENST00000596104 M0QXV9 152 aa5.94□□□□□ -1.46
LIG1-209ENST00000596104 RPL13AP40429 203 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms