RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 ESDP10768 282 aa14.14□□□□□ -0.15
SSBP4-203ENST00000593641 REG3GQ6UW15 175 aa14.14□□□□□ -0.15
SSBP4-203ENST00000593641 SPINK6Q6UWN8 80 aa14.14□□□□□ -0.15
SSBP4-203ENST00000593641 FAM231DQ6ZW35 169 aa14.14□□□□□ -0.15
SSBP4-203ENST00000593641 TMEM242Q9NWH2 141 aa14.14□□□□□ -0.15
SSBP4-203ENST00000593641 TMEM250H0YL14 139 aa14.13□□□□□ -0.15
SSBP4-203ENST00000593641 TSHBP01222 138 aa14.13□□□□□ -0.15
SSBP4-203ENST00000593641 TCTE3Q8IZS6 198 aa14.13□□□□□ -0.15
SSBP4-203ENST00000593641 A0A0J9YXV3 536 aa14.12□□□□□ -0.15
SSBP4-203ENST00000593641 SYCNQ0VAF6 134 aa14.12□□□□□ -0.15
SSBP4-203ENST00000593641 CT83Q5H943 113 aa14.12□□□□□ -0.15
SSBP4-203ENST00000593641 CD164L2Q6UWJ8 174 aa14.12□□□□□ -0.15
SSBP4-203ENST00000593641 Q6ZRP5 223 aa14.11□□□□□ -0.15
SSBP4-203ENST00000593641 CDC42SE2Q9NRR3 84 aa14.11□□□□□ -0.15
SSBP4-203ENST00000593641 C7orf77A4D0Y5 90 aa14.1□□□□□ -0.15
SSBP4-203ENST00000593641 GAS8-AS1O95177 125 aa14.1□□□□□ -0.15
SSBP4-203ENST00000593641 CEBPGP53567 150 aa14.1□□□□□ -0.15
SSBP4-203ENST00000593641 MRPL52Q86TS9 123 aaKnown RBP14.1□□□□□ -0.15
SSBP4-203ENST00000593641 ISOC2Q96AB3 205 aa14.1□□□□□ -0.15
SSBP4-203ENST00000593641 ZNF664Q8N3J9 261 aa14.09□□□□□ -0.15
SSBP4-203ENST00000593641 A0A1B0GUT8 65 aa14.08□□□□□ -0.16
SSBP4-203ENST00000593641 CAMPP49913 170 aa14.08□□□□□ -0.16
SSBP4-203ENST00000593641 TMEM191AQ9H0A3 160 aa14.08□□□□□ -0.16
SSBP4-203ENST00000593641 TRBV27A0A0K0K1C4 114 aa14.07□□□□□ -0.16
SSBP4-203ENST00000593641 MALP21145 153 aa14.07□□□□□ -0.16
SSBP4-203ENST00000593641 POLR2KP53803 58 aaKnown RBP14.07□□□□□ -0.16
SSBP4-203ENST00000593641 HIGD1CA8MV81 97 aa14.06□□□□□ -0.16
SSBP4-203ENST00000593641 PTTG1IPP53801 180 aa14.06□□□□□ -0.16
SSBP4-203ENST00000593641 BLOC1S1P78537 153 aa14.06□□□□□ -0.16
SSBP4-203ENST00000593641 ODF1Q14990 250 aa14.06□□□□□ -0.16
SSBP4-203ENST00000593641 TSKUQ8WUA8 353 aa14.06□□□□□ -0.16
SSBP4-203ENST00000593641 LOC107984640A0A0U1RRK4 108 aa14.05□□□□□ -0.16
SSBP4-203ENST00000593641 GAGE2BQ13066 116 aa14.05□□□□□ -0.16
SSBP4-203ENST00000593641 C1orf196B1AJZ1 125 aa14.04□□□□□ -0.16
SSBP4-203ENST00000593641 RAB4AP20338 218 aa14.04□□□□□ -0.16
SSBP4-203ENST00000593641 FCER1GP30273 86 aa14.04□□□□□ -0.16
SSBP4-203ENST00000593641 KRTAP10-8P60410 259 aa14.04□□□□□ -0.16
SSBP4-203ENST00000593641 SMAGPQ0VAQ4 97 aa14.04□□□□□ -0.16
SSBP4-203ENST00000593641 AMN1Q8IY45 258 aa14.04□□□□□ -0.16
SSBP4-203ENST00000593641 IGLV4-69A0A075B6H9 119 aa14.03□□□□□ -0.16
SSBP4-203ENST00000593641 COX7A2LO14548 114 aa14.03□□□□□ -0.16
SSBP4-203ENST00000593641 SRSF9Q13242 221 aaKnown RBP eCLIP14.03□□□□□ -0.16
SSBP4-203ENST00000593641 ALKAL2Q6UX46 152 aa14.03□□□□□ -0.16
SSBP4-203ENST00000593641 SMIM7Q9BQ49 75 aa14.03□□□□□ -0.16
SSBP4-203ENST00000593641 VCYO14598 125 aa14.02□□□□□ -0.17
SSBP4-203ENST00000593641 CAMK2N2Q96S95 79 aa14.02□□□□□ -0.17
SSBP4-203ENST00000593641 LINC01551Q86U37 167 aa14.01□□□□□ -0.17
SSBP4-203ENST00000593641 PPP1R17O96001 155 aa14□□□□□ -0.17
SSBP4-203ENST00000593641 NUP35Q8NFH5 326 aa14□□□□□ -0.17
SSBP4-203ENST00000593641 KIR2DL4Q99706 377 aa14□□□□□ -0.17
SSBP4-203ENST00000593641 EIF5A2Q9GZV4 153 aaKnown RBP14□□□□□ -0.17
SSBP4-203ENST00000593641 CSDC2Q9Y534 153 aaKnown RBP14□□□□□ -0.17
SSBP4-203ENST00000593641 SMKR1H3BMG3 65 aa13.99□□□□□ -0.17
SSBP4-203ENST00000593641 APOMO95445 188 aa13.99□□□□□ -0.17
SSBP4-203ENST00000593641 OSTCQ9NRP0 149 aa13.99□□□□□ -0.17
SSBP4-203ENST00000593641 UBE2D4Q9Y2X8 147 aa13.99□□□□□ -0.17
SSBP4-203ENST00000593641 TRAV13-1A0A0B4J241 112 aa13.98□□□□□ -0.17
SSBP4-203ENST00000593641 SUMO2P61956 95 aaKnown RBP13.98□□□□□ -0.17
SSBP4-203ENST00000593641 RIGQ13278 110 aa13.98□□□□□ -0.17
SSBP4-203ENST00000593641 RNASE13Q5GAN3 156 aaKnown RBP13.98□□□□□ -0.17
SSBP4-203ENST00000593641 A0A1W2PNN7 141 aa13.97□□□□□ -0.17
SSBP4-203ENST00000593641 ZNF727A8MUV8 499 aa13.97□□□□□ -0.17
SSBP4-203ENST00000593641 RPL18AQ02543 176 aaKnown RBP13.97□□□□□ -0.17
SSBP4-203ENST00000593641 C2orf48Q96LS8 159 aa13.97□□□□□ -0.17
SSBP4-203ENST00000593641 TMEM18Q96B42 140 aa13.96□□□□□ -0.17
SSBP4-203ENST00000593641 PPP1R2P9O14990 202 aa13.95□□□□□ -0.18
SSBP4-203ENST00000593641 MT-ND6P03923 174 aa13.95□□□□□ -0.18
SSBP4-203ENST00000593641 C9orf116Q5BN46 136 aaPredicted RBP13.95□□□□□ -0.18
SSBP4-203ENST00000593641 C5orf38Q86SI9 138 aa13.95□□□□□ -0.18
SSBP4-203ENST00000593641 NRACQ8N912 160 aa13.95□□□□□ -0.18
SSBP4-203ENST00000593641 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.94□□□□□ -0.18
SSBP4-203ENST00000593641 SPAG11BQ08648 103 aa13.94□□□□□ -0.18
SSBP4-203ENST00000593641 Q6ZUT4 128 aa13.94□□□□□ -0.18
SSBP4-203ENST00000593641 PSORS1C2Q9UIG4 136 aa13.94□□□□□ -0.18
SSBP4-203ENST00000593641 AKAP14Q86UN6 197 aa13.93□□□□□ -0.18
SSBP4-203ENST00000593641 V9GYV3 84 aa13.93□□□□□ -0.18
SSBP4-203ENST00000593641 TIMM21Q9BVV7 248 aa13.92□□□□□ -0.18
SSBP4-203ENST00000593641 NAT8BQ9UHF3 227 aa13.92□□□□□ -0.18
SSBP4-203ENST00000593641 RNF151Q2KHN1 245 aa13.9□□□□□ -0.18
SSBP4-203ENST00000593641 C1orf137Q5JT78 98 aa13.9□□□□□ -0.18
SSBP4-203ENST00000593641 OR10D4PQ8NGN7 298 aa13.9□□□□□ -0.18
SSBP4-203ENST00000593641 OPRPNQ99935 248 aaPredicted RBP13.9□□□□□ -0.18
SSBP4-203ENST00000593641 SRP19P09132 144 aaKnown RBP13.89□□□□□ -0.19
SSBP4-203ENST00000593641 MRPL51Q4U2R6 128 aaKnown RBP13.89□□□□□ -0.19
SSBP4-203ENST00000593641 TCAPO15273 167 aa13.88□□□□□ -0.19
SSBP4-203ENST00000593641 FAM104BQ5XKR9 115 aa13.88□□□□□ -0.19
SSBP4-203ENST00000593641 PHF5AQ7RTV0 110 aaKnown RBP13.88□□□□□ -0.19
SSBP4-203ENST00000593641 C20orf78Q9BR46 151 aa13.88□□□□□ -0.19
SSBP4-203ENST00000593641 LINC00862A6NCI5 91 aa13.87□□□□□ -0.19
SSBP4-203ENST00000593641 ORAOV1Q8WV07 137 aa13.87□□□□□ -0.19
SSBP4-203ENST00000593641 IMMP2LQ96T52 175 aa13.86□□□□□ -0.19
SSBP4-203ENST00000593641 MRPL35Q9NZE8 188 aaKnown RBP13.86□□□□□ -0.19
SSBP4-203ENST00000593641 F8WDY8 70 aa13.85□□□□□ -0.19
SSBP4-203ENST00000593641 CKS2P33552 79 aa13.85□□□□□ -0.19
SSBP4-203ENST00000593641 TMEM241Q24JQ0 296 aa13.85□□□□□ -0.19
SSBP4-203ENST00000593641 TRBV24-1A0A075B6N3 115 aa13.84□□□□□ -0.19
SSBP4-203ENST00000593641 NDUFA1O15239 70 aa13.84□□□□□ -0.19
SSBP4-203ENST00000593641 RPL39P62891 51 aaKnown RBP13.84□□□□□ -0.19
SSBP4-203ENST00000593641 RPL32P62910 135 aaKnown RBP13.84□□□□□ -0.19
SSBP4-203ENST00000593641 FAM74A3Q4VXF1 159 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms