RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 A0A087X002 238 aa7.48□□□□□ -1.21
NEDD4L-227ENST00000590020 TRGC1P0CF51 173 aa7.48□□□□□ -1.21
NEDD4L-227ENST00000590020 ZNF25P17030 456 aaPredicted RBP7.48□□□□□ -1.21
NEDD4L-227ENST00000590020 UBE2BP63146 152 aa7.48□□□□□ -1.21
NEDD4L-227ENST00000590020 EIF5AL1Q6IS14 154 aaKnown RBP7.48□□□□□ -1.21
NEDD4L-227ENST00000590020 KRTAP7-1Q8IUC3 87 aa7.48□□□□□ -1.21
NEDD4L-227ENST00000590020 NCR2O95944 276 aa7.47□□□□□ -1.21
NEDD4L-227ENST00000590020 S100A9P06702 114 aaKnown RBP7.47□□□□□ -1.21
NEDD4L-227ENST00000590020 IFITM3Q01628 133 aa7.47□□□□□ -1.21
NEDD4L-227ENST00000590020 Q5BKY6 102 aa7.47□□□□□ -1.21
NEDD4L-227ENST00000590020 MARVELD1Q9BSK0 173 aa7.47□□□□□ -1.21
NEDD4L-227ENST00000590020 RPP21Q9H633 154 aaKnown RBP7.47□□□□□ -1.21
NEDD4L-227ENST00000590020 SDHAF1A6NFY7 115 aa7.46□□□□□ -1.22
NEDD4L-227ENST00000590020 COX7A2LO14548 114 aa7.46□□□□□ -1.22
NEDD4L-227ENST00000590020 LINC01547P58512 204 aaPredicted RBP7.46□□□□□ -1.22
NEDD4L-227ENST00000590020 SRSF3P84103 164 aaKnown RBP7.46□□□□□ -1.22
NEDD4L-227ENST00000590020 TMUB2Q71RG4 321 aa7.46□□□□□ -1.22
NEDD4L-227ENST00000590020 C5orf38Q86SI9 138 aa7.46□□□□□ -1.22
NEDD4L-227ENST00000590020 TSKUQ8WUA8 353 aa7.46□□□□□ -1.22
NEDD4L-227ENST00000590020 C2orf48Q96LS8 159 aa7.46□□□□□ -1.22
NEDD4L-227ENST00000590020 CDC42SE2Q9NRR3 84 aa7.46□□□□□ -1.22
NEDD4L-227ENST00000590020 BORCS7-ASMTA0A0B4J1R7 106 aa7.45□□□□□ -1.22
NEDD4L-227ENST00000590020 FOXA3P55318 350 aaPredicted RBP7.45□□□□□ -1.22
NEDD4L-227ENST00000590020 GAGE2EQ4V326 116 aa7.45□□□□□ -1.22
NEDD4L-227ENST00000590020 RNASE13Q5GAN3 156 aaKnown RBP7.45□□□□□ -1.22
NEDD4L-227ENST00000590020 GAGE2DQ9UEU5 116 aa7.45□□□□□ -1.22
NEDD4L-227ENST00000590020 M0QXV9 152 aa7.44□□□□□ -1.22
NEDD4L-227ENST00000590020 PMCHP20382 165 aa7.44□□□□□ -1.22
NEDD4L-227ENST00000590020 RPL35P42766 123 aaKnown RBP7.44□□□□□ -1.22
NEDD4L-227ENST00000590020 SPAG11BQ08648 103 aa7.44□□□□□ -1.22
NEDD4L-227ENST00000590020 TWIST1Q15672 202 aa7.44□□□□□ -1.22
NEDD4L-227ENST00000590020 TYMSOSQ8TAI1 123 aa7.44□□□□□ -1.22
NEDD4L-227ENST00000590020 C19orf71A6NCJ1 209 aa7.43□□□□□ -1.22
NEDD4L-227ENST00000590020 F2Z2F3 143 aa7.43□□□□□ -1.22
NEDD4L-227ENST00000590020 PFDN1O60925 122 aa7.43□□□□□ -1.22
NEDD4L-227ENST00000590020 UPK1BO75841 260 aa7.43□□□□□ -1.22
NEDD4L-227ENST00000590020 RPS20P60866 119 aaKnown RBP7.43□□□□□ -1.22
NEDD4L-227ENST00000590020 C10orf25Q5T742 122 aa7.43□□□□□ -1.22
NEDD4L-227ENST00000590020 TMEM242Q9NWH2 141 aa7.43□□□□□ -1.22
NEDD4L-227ENST00000590020 IGLV7-46A0A075B6I9 117 aa7.42□□□□□ -1.22
NEDD4L-227ENST00000590020 I3L3M4 83 aa7.42□□□□□ -1.22
NEDD4L-227ENST00000590020 ZNF861PO60384 105 aa7.42□□□□□ -1.22
NEDD4L-227ENST00000590020 TSHBP01222 138 aa7.42□□□□□ -1.22
NEDD4L-227ENST00000590020 IFNA1P01562 189 aa7.42□□□□□ -1.22
NEDD4L-227ENST00000590020 ESDP10768 282 aa7.42□□□□□ -1.22
NEDD4L-227ENST00000590020 TPRXLQ17RH7 258 aa7.42□□□□□ -1.22
NEDD4L-227ENST00000590020 RNF151Q2KHN1 245 aa7.42□□□□□ -1.22
NEDD4L-227ENST00000590020 ANAPC11Q9NYG5 84 aa7.42□□□□□ -1.22
NEDD4L-227ENST00000590020 TRAV13-1A0A0B4J241 112 aa7.41□□□□□ -1.22
NEDD4L-227ENST00000590020 C1orf196B1AJZ1 125 aa7.41□□□□□ -1.22
NEDD4L-227ENST00000590020 CENPWQ5EE01 88 aa7.41□□□□□ -1.22
NEDD4L-227ENST00000590020 SFT2D1Q8WV19 159 aa7.41□□□□□ -1.22
NEDD4L-227ENST00000590020 MRAP2Q96G30 205 aa7.41□□□□□ -1.22
NEDD4L-227ENST00000590020 RNASE7Q9H1E1 156 aaKnown RBP7.41□□□□□ -1.22
NEDD4L-227ENST00000590020 FXYD6-FXYD2A0A087WZ82 144 aa7.4□□□□□ -1.22
NEDD4L-227ENST00000590020 G3V3Q6 166 aa7.4□□□□□ -1.22
NEDD4L-227ENST00000590020 IMMP2LQ96T52 175 aa7.4□□□□□ -1.22
NEDD4L-227ENST00000590020 KRTAP4-1Q9BYQ7 146 aa7.4□□□□□ -1.22
NEDD4L-227ENST00000590020 MRPL35Q9NZE8 188 aaKnown RBP7.4□□□□□ -1.22
NEDD4L-227ENST00000590020 ALG5Q9Y673 324 aa7.4□□□□□ -1.22
NEDD4L-227ENST00000590020 RAB19A4D1S5 217 aa7.39□□□□□ -1.23
NEDD4L-227ENST00000590020 CTRLP40313 264 aa7.39□□□□□ -1.23
NEDD4L-227ENST00000590020 UNQ6190/PRO20217Q6UXQ8 127 aa7.39□□□□□ -1.23
NEDD4L-227ENST00000590020 MRPL52Q86TS9 123 aaKnown RBP7.39□□□□□ -1.23
NEDD4L-227ENST00000590020 C9orf62Q8N4C0 152 aa7.39□□□□□ -1.23
NEDD4L-227ENST00000590020 ORAOV1Q8WV07 137 aa7.39□□□□□ -1.23
NEDD4L-227ENST00000590020 C6orf48Q9UBA6 75 aa7.39□□□□□ -1.23
NEDD4L-227ENST00000590020 XKRY2A2RUG3 117 aa7.38□□□□□ -1.23
NEDD4L-227ENST00000590020 CRYGAP11844 174 aa7.38□□□□□ -1.23
NEDD4L-227ENST00000590020 LINC00173Q6ZV60 143 aa7.38□□□□□ -1.23
NEDD4L-227ENST00000590020 KCNRGQ8N5I3 272 aa7.38□□□□□ -1.23
NEDD4L-227ENST00000590020 FAM213BQ8TBF2 198 aa7.38□□□□□ -1.23
NEDD4L-227ENST00000590020 NDUFA1O15239 70 aa7.37□□□□□ -1.23
NEDD4L-227ENST00000590020 KRTAP13-2Q52LG2 175 aa7.37□□□□□ -1.23
NEDD4L-227ENST00000590020 S100ZQ8WXG8 99 aa7.37□□□□□ -1.23
NEDD4L-227ENST00000590020 SMDT1Q9H4I9 107 aa7.37□□□□□ -1.23
NEDD4L-227ENST00000590020 CYTL1Q9NRR1 136 aa7.37□□□□□ -1.23
NEDD4L-227ENST00000590020 C7orf77A4D0Y5 90 aa7.36□□□□□ -1.23
NEDD4L-227ENST00000590020 TLX1NBP0CAT3 122 aa7.36□□□□□ -1.23
NEDD4L-227ENST00000590020 C9orf129Q5T035 196 aaKnown RBP7.36□□□□□ -1.23
NEDD4L-227ENST00000590020 OR10D4PQ8NGN7 298 aa7.36□□□□□ -1.23
NEDD4L-227ENST00000590020 CTDSP1Q9GZU7 261 aa7.36□□□□□ -1.23
NEDD4L-227ENST00000590020 MBD3L1Q8WWY6 194 aa7.35□□□□□ -1.23
NEDD4L-227ENST00000590020 CNFNQ9BYD5 112 aa7.35□□□□□ -1.23
NEDD4L-227ENST00000590020 PPDPFQ9H3Y8 114 aa7.35□□□□□ -1.23
NEDD4L-227ENST00000590020 ST20Q9HBF5 79 aa7.35□□□□□ -1.23
NEDD4L-227ENST00000590020 TRBV6-5A0A0K0K1A5 114 aa7.34□□□□□ -1.23
NEDD4L-227ENST00000590020 GNG4P50150 75 aa7.34□□□□□ -1.23
NEDD4L-227ENST00000590020 TEX261Q6UWH6 196 aa7.34□□□□□ -1.23
NEDD4L-227ENST00000590020 Q6ZUT4 128 aa7.34□□□□□ -1.23
NEDD4L-227ENST00000590020 LINC00304Q8N9R0 145 aa7.34□□□□□ -1.23
NEDD4L-227ENST00000590020 NUDT10Q8NFP7 164 aa7.34□□□□□ -1.23
NEDD4L-227ENST00000590020 NUDT11Q96G61 164 aa7.34□□□□□ -1.23
NEDD4L-227ENST00000590020 UBE2D4Q9Y2X8 147 aa7.34□□□□□ -1.23
NEDD4L-227ENST00000590020 CCL20P78556 96 aa7.33□□□□□ -1.24
NEDD4L-227ENST00000590020 TMEM241Q24JQ0 296 aa7.33□□□□□ -1.24
NEDD4L-227ENST00000590020 SMIM15Q7Z3B0 74 aa7.33□□□□□ -1.24
NEDD4L-227ENST00000590020 C11orf52Q96A22 123 aa7.33□□□□□ -1.24
NEDD4L-227ENST00000590020 TRBV20OR9-2A0A075B6H5 130 aa7.32□□□□□ -1.24
NEDD4L-227ENST00000590020 A6NJY4 79 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms