RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 DGAT2L7PQ6IED9 249 aa12.04□□□□□ -0.48
CXXC1-212ENST00000589940 DNAH7Q8WXX0 4024 aa12.04□□□□□ -0.48
CXXC1-212ENST00000589940 A0A087WX48 190 aa12.03□□□□□ -0.48
CXXC1-212ENST00000589940 GAGE6Q13070 117 aa12.03□□□□□ -0.48
CXXC1-212ENST00000589940 LELP1Q5T871 98 aa12.03□□□□□ -0.48
CXXC1-212ENST00000589940 AMMECR1LQ6DCA0 310 aa12.03□□□□□ -0.48
CXXC1-212ENST00000589940 LYPD5Q6UWN5 251 aa12.03□□□□□ -0.48
CXXC1-212ENST00000589940 C15orf53Q8NAA6 179 aa12.03□□□□□ -0.48
CXXC1-212ENST00000589940 PRSS29PA6NIE9 313 aa12.03□□□□□ -0.48
CXXC1-212ENST00000589940 TSTD3H0UI37 97 aa12.03□□□□□ -0.48
CXXC1-212ENST00000589940 MRPS36P82909 103 aaKnown RBP12.03□□□□□ -0.48
CXXC1-212ENST00000589940 LBHQ53QV2 105 aaPredicted RBP12.03□□□□□ -0.48
CXXC1-212ENST00000589940 VCX2Q9H322 139 aa12.03□□□□□ -0.48
CXXC1-212ENST00000589940 DYNC2H1Q8NCM8 4307 aaKnown RBP12.02□□□□□ -0.48
CXXC1-212ENST00000589940 ZNF25P17030 456 aaPredicted RBP12.02□□□□□ -0.48
CXXC1-212ENST00000589940 ZC2HC1BQ5TFG8 222 aa12.02□□□□□ -0.48
CXXC1-212ENST00000589940 Q6ZUT4 128 aa12.02□□□□□ -0.48
CXXC1-212ENST00000589940 C2orf88Q9BSF0 95 aa12.02□□□□□ -0.48
CXXC1-212ENST00000589940 CST9LQ9H4G1 147 aa12.02□□□□□ -0.48
CXXC1-212ENST00000589940 TEX43Q6ZNM6 134 aa12.02□□□□□ -0.49
CXXC1-212ENST00000589940 OR5A1Q8NGJ0 315 aa12.02□□□□□ -0.49
CXXC1-212ENST00000589940 TMEM101Q96IK0 257 aa12.02□□□□□ -0.49
CXXC1-212ENST00000589940 AMELXQ99217 191 aa12.01□□□□□ -0.49
CXXC1-212ENST00000589940 MRPL35Q9NZE8 188 aaKnown RBP12.01□□□□□ -0.49
CXXC1-212ENST00000589940 ATOH7Q8N100 152 aa12.01□□□□□ -0.49
CXXC1-212ENST00000589940 CHTOPQ9Y3Y2 248 aaKnown RBP12.01□□□□□ -0.49
CXXC1-212ENST00000589940 IGLL5B9A064 214 aa12□□□□□ -0.49
CXXC1-212ENST00000589940 F8VRH5 84 aa12□□□□□ -0.49
CXXC1-212ENST00000589940 RNASE13Q5GAN3 156 aaKnown RBP12□□□□□ -0.49
CXXC1-212ENST00000589940 TMEM262E9PQX1 116 aa11.99□□□□□ -0.49
CXXC1-212ENST00000589940 CDC42SE2Q9NRR3 84 aa11.99□□□□□ -0.49
CXXC1-212ENST00000589940 ZNF664Q8N3J9 261 aa11.99□□□□□ -0.49
CXXC1-212ENST00000589940 PRO1933Q9H354 126 aa11.99□□□□□ -0.49
CXXC1-212ENST00000589940 A0A1B0GUV1 79 aa11.98□□□□□ -0.49
CXXC1-212ENST00000589940 DPM2O94777 84 aa11.98□□□□□ -0.49
CXXC1-212ENST00000589940 ESRGQ1W209 222 aa11.98□□□□□ -0.49
CXXC1-212ENST00000589940 PLNP26678 52 aa11.98□□□□□ -0.49
CXXC1-212ENST00000589940 IGLV4-60A0A075B6I1 120 aa11.97□□□□□ -0.49
CXXC1-212ENST00000589940 IGKCP01834 107 aa11.97□□□□□ -0.49
CXXC1-212ENST00000589940 MPV17L2Q567V2 206 aa11.97□□□□□ -0.49
CXXC1-212ENST00000589940 TRAV8-6A0A0B4J262 113 aa11.96□□□□□ -0.49
CXXC1-212ENST00000589940 RBX1P62877 108 aa11.96□□□□□ -0.49
CXXC1-212ENST00000589940 CSMD3Q7Z407 3707 aa11.96□□□□□ -0.49
CXXC1-212ENST00000589940 IGLV4-69A0A075B6H9 119 aa11.96□□□□□ -0.49
CXXC1-212ENST00000589940 VAMP8Q9BV40 100 aa11.96□□□□□ -0.49
CXXC1-212ENST00000589940 TRAV9-2A0A087WT02 112 aa11.95□□□□□ -0.5
CXXC1-212ENST00000589940 MAJINQ3KP22 176 aa11.94□□□□□ -0.5
CXXC1-212ENST00000589940 NUPR2A6NF83 97 aa11.93□□□□□ -0.5
CXXC1-212ENST00000589940 PAM16Q9Y3D7 125 aa11.93□□□□□ -0.5
CXXC1-212ENST00000589940 A0A0J9YXV3 536 aa11.92□□□□□ -0.5
CXXC1-212ENST00000589940 hDV102S1A0JD36 115 aa11.92□□□□□ -0.5
CXXC1-212ENST00000589940 C11orf86A6NJI1 115 aa11.92□□□□□ -0.5
CXXC1-212ENST00000589940 HSBP1L1C9JCN9 74 aa11.92□□□□□ -0.5
CXXC1-212ENST00000589940 IGLC3P0DOY3 106 aa11.92□□□□□ -0.5
CXXC1-212ENST00000589940 UBE2D1P51668 147 aa11.92□□□□□ -0.5
CXXC1-212ENST00000589940 NFE4Q86UQ8 179 aa11.92□□□□□ -0.5
CXXC1-212ENST00000589940 WFDC10BQ8IUB3 73 aa11.92□□□□□ -0.5
CXXC1-212ENST00000589940 Q8N3U1 123 aa11.92□□□□□ -0.5
CXXC1-212ENST00000589940 TGP01266 2768 aa11.91□□□□□ -0.5
CXXC1-212ENST00000589940 CHAC1Q9BUX1 264 aa11.91□□□□□ -0.5
CXXC1-212ENST00000589940 CCL18P55774 89 aa11.91□□□□□ -0.5
CXXC1-212ENST00000589940 TRAV13-1A0A0B4J241 112 aa11.9□□□□□ -0.5
CXXC1-212ENST00000589940 SPATA45Q537H7 98 aa11.9□□□□□ -0.5
CXXC1-212ENST00000589940 STPG4Q8N801 248 aa11.9□□□□□ -0.5
CXXC1-212ENST00000589940 KLK5Q9Y337 293 aaPredicted RBP11.9□□□□□ -0.5
CXXC1-212ENST00000589940 PLECQ15149 4684 aaKnown RBP11.9□□□□□ -0.5
CXXC1-212ENST00000589940 TINCRA0A1B0GVN0 87 aa11.9□□□□□ -0.51
CXXC1-212ENST00000589940 LINC00588Q9Y4M8 146 aa11.9□□□□□ -0.51
CXXC1-212ENST00000589940 ANGP03950 147 aaKnown RBP11.89□□□□□ -0.51
CXXC1-212ENST00000589940 FAM19A3Q7Z5A8 133 aa11.89□□□□□ -0.51
CXXC1-212ENST00000589940 APLNQ9ULZ1 77 aa11.89□□□□□ -0.51
CXXC1-212ENST00000589940 MRPS16Q9Y3D3 137 aaKnown RBP11.89□□□□□ -0.51
CXXC1-212ENST00000589940 STARD9Q9P2P6 4700 aa11.89□□□□□ -0.51
CXXC1-212ENST00000589940 IGKV3OR2-268A0A0C4DH90 116 aa11.88□□□□□ -0.51
CXXC1-212ENST00000589940 SEC11AP67812 179 aa11.88□□□□□ -0.51
CXXC1-212ENST00000589940 LINC00242Q5T6M2 205 aa11.88□□□□□ -0.51
CXXC1-212ENST00000589940 LINC00269Q8N2A0 174 aa11.88□□□□□ -0.51
CXXC1-212ENST00000589940 TMEM170BQ5T4T1 132 aa11.87□□□□□ -0.51
CXXC1-212ENST00000589940 GEMIN7Q9H840 131 aaKnown RBP11.87□□□□□ -0.51
CXXC1-212ENST00000589940 IGHV3-30P01768 117 aa11.86□□□□□ -0.51
CXXC1-212ENST00000589940 IGHV3-33P01772 117 aa11.86□□□□□ -0.51
CXXC1-212ENST00000589940 IGHV3-30-3P0DP02 117 aa11.86□□□□□ -0.51
CXXC1-212ENST00000589940 IGHV3-30-5P0DP03 117 aa11.86□□□□□ -0.51
CXXC1-212ENST00000589940 ZNF22P17026 224 aaPredicted RBP11.86□□□□□ -0.51
CXXC1-212ENST00000589940 TCTAP57738 103 aa11.86□□□□□ -0.51
CXXC1-212ENST00000589940 HERVK_113P63121 156 aa11.86□□□□□ -0.51
CXXC1-212ENST00000589940 ANKRD39Q53RE8 183 aa11.86□□□□□ -0.51
CXXC1-212ENST00000589940 LINC00959A0A1B0GUT2 108 aa11.86□□□□□ -0.51
CXXC1-212ENST00000589940 LINC01556Q5JQF7 62 aa11.86□□□□□ -0.51
CXXC1-212ENST00000589940 CLPSL2Q6UWE3 100 aa11.86□□□□□ -0.51
CXXC1-212ENST00000589940 REG3AQ06141 175 aa11.85□□□□□ -0.51
CXXC1-212ENST00000589940 LYSTQ99698 3801 aa11.85□□□□□ -0.51
CXXC1-212ENST00000589940 IGLV5-45A0A087WSX0 123 aa11.84□□□□□ -0.51
CXXC1-212ENST00000589940 EREGO14944 169 aa11.84□□□□□ -0.51
CXXC1-212ENST00000589940 UPK3BQ9BT76 320 aa11.84□□□□□ -0.51
CXXC1-212ENST00000589940 KLK12Q9UKR0 248 aa11.84□□□□□ -0.51
CXXC1-212ENST00000589940 CBY1Q9Y3M2 126 aa11.84□□□□□ -0.51
CXXC1-212ENST00000589940 TENM2Q9NT68 2774 aa11.84□□□□□ -0.51
CXXC1-212ENST00000589940 DNAH10OSP0CZ25 163 aa11.84□□□□□ -0.51
CXXC1-212ENST00000589940 COX6A2Q02221 97 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms