RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 GIPP09681 153 aaPredicted RBP13.06□□□□□ -0.32
CAPNS1-205ENST00000588780 C19orf71A6NCJ1 209 aa13.05□□□□□ -0.32
CAPNS1-205ENST00000588780 I3L3M4 83 aa13.05□□□□□ -0.32
CAPNS1-205ENST00000588780 KRTAP1-4P0C5Y4 121 aa13.05□□□□□ -0.32
CAPNS1-205ENST00000588780 SMIM15Q7Z3B0 74 aa13.05□□□□□ -0.32
CAPNS1-205ENST00000588780 MRAP2Q96G30 205 aa13.05□□□□□ -0.32
CAPNS1-205ENST00000588780 MBD3L1Q8WWY6 194 aa13.04□□□□□ -0.32
CAPNS1-205ENST00000588780 GNG4P50150 75 aa13.03□□□□□ -0.32
CAPNS1-205ENST00000588780 C9orf62Q8N4C0 152 aa13.03□□□□□ -0.32
CAPNS1-205ENST00000588780 C2orf48Q96LS8 159 aa13.03□□□□□ -0.32
CAPNS1-205ENST00000588780 CDC42SE2Q9NRR3 84 aa13.03□□□□□ -0.32
CAPNS1-205ENST00000588780 FAM19A5Q7Z5A7 132 aaPredicted RBP13.02□□□□□ -0.33
CAPNS1-205ENST00000588780 CYTL1Q9NRR1 136 aa13.02□□□□□ -0.33
CAPNS1-205ENST00000588780 RAB19A4D1S5 217 aa13.01□□□□□ -0.33
CAPNS1-205ENST00000588780 C1orf196B1AJZ1 125 aa13.01□□□□□ -0.33
CAPNS1-205ENST00000588780 ARPC5O15511 151 aa13.01□□□□□ -0.33
CAPNS1-205ENST00000588780 CTRLP40313 264 aa13.01□□□□□ -0.33
CAPNS1-205ENST00000588780 UBE2BP63146 152 aa13.01□□□□□ -0.33
CAPNS1-205ENST00000588780 TEX261Q6UWH6 196 aa13.01□□□□□ -0.33
CAPNS1-205ENST00000588780 KRTAP11-1Q8IUC1 163 aa13.01□□□□□ -0.33
CAPNS1-205ENST00000588780 TMEM242Q9NWH2 141 aa13.01□□□□□ -0.33
CAPNS1-205ENST00000588780 FAM168BA1KXE4 195 aa13□□□□□ -0.33
CAPNS1-205ENST00000588780 H2AFB1P0C5Y9 115 aa13□□□□□ -0.33
CAPNS1-205ENST00000588780 SPAG11BQ08648 103 aa13□□□□□ -0.33
CAPNS1-205ENST00000588780 C5orf38Q86SI9 138 aa12.99□□□□□ -0.33
CAPNS1-205ENST00000588780 BIN3Q9NQY0 253 aa12.99□□□□□ -0.33
CAPNS1-205ENST00000588780 GNG13Q9P2W3 67 aa12.99□□□□□ -0.33
CAPNS1-205ENST00000588780 UMAD1C9J7I0 102 aa12.98□□□□□ -0.33
CAPNS1-205ENST00000588780 ESDP10768 282 aa12.98□□□□□ -0.33
CAPNS1-205ENST00000588780 C11orf52Q96A22 123 aa12.98□□□□□ -0.33
CAPNS1-205ENST00000588780 TSHBP01222 138 aa12.97□□□□□ -0.33
CAPNS1-205ENST00000588780 FOXA3P55318 350 aaPredicted RBP12.97□□□□□ -0.33
CAPNS1-205ENST00000588780 IMMP2LQ96T52 175 aa12.97□□□□□ -0.33
CAPNS1-205ENST00000588780 TRAV13-1A0A0B4J241 112 aa12.96□□□□□ -0.33
CAPNS1-205ENST00000588780 CCL20P78556 96 aa12.96□□□□□ -0.33
CAPNS1-205ENST00000588780 RNF151Q2KHN1 245 aa12.96□□□□□ -0.33
CAPNS1-205ENST00000588780 MRPL52Q86TS9 123 aaKnown RBP12.96□□□□□ -0.33
CAPNS1-205ENST00000588780 SMIM12Q96EX1 92 aa12.96□□□□□ -0.33
CAPNS1-205ENST00000588780 ST20Q9HBF5 79 aa12.96□□□□□ -0.33
CAPNS1-205ENST00000588780 MANBALQ9NQG1 85 aa12.96□□□□□ -0.33
CAPNS1-205ENST00000588780 CARHSP1Q9Y2V2 147 aaKnown RBP12.96□□□□□ -0.33
CAPNS1-205ENST00000588780 RNASE13Q5GAN3 156 aaKnown RBP12.95□□□□□ -0.34
CAPNS1-205ENST00000588780 NUDT10Q8NFP7 164 aa12.95□□□□□ -0.34
CAPNS1-205ENST00000588780 NUDT11Q96G61 164 aa12.95□□□□□ -0.34
CAPNS1-205ENST00000588780 CNFNQ9BYD5 112 aa12.95□□□□□ -0.34
CAPNS1-205ENST00000588780 C7orf77A4D0Y5 90 aa12.94□□□□□ -0.34
CAPNS1-205ENST00000588780 GAGE2EQ4V326 116 aa12.94□□□□□ -0.34
CAPNS1-205ENST00000588780 GAGE2DQ9UEU5 116 aa12.94□□□□□ -0.34
CAPNS1-205ENST00000588780 G3V3Q6 166 aa12.93□□□□□ -0.34
CAPNS1-205ENST00000588780 M0QXV9 152 aa12.92□□□□□ -0.34
CAPNS1-205ENST00000588780 RPP21Q9H633 154 aaKnown RBP12.92□□□□□ -0.34
CAPNS1-205ENST00000588780 TRBV6-5A0A0K0K1A5 114 aa12.91□□□□□ -0.34
CAPNS1-205ENST00000588780 ORAOV1Q8WV07 137 aa12.91□□□□□ -0.34
CAPNS1-205ENST00000588780 RNASE7Q9H1E1 156 aaKnown RBP12.91□□□□□ -0.34
CAPNS1-205ENST00000588780 MED9Q9NWA0 146 aa12.91□□□□□ -0.34
CAPNS1-205ENST00000588780 MRPL35Q9NZE8 188 aaKnown RBP12.91□□□□□ -0.34
CAPNS1-205ENST00000588780 NDUFA1O15239 70 aa12.9□□□□□ -0.34
CAPNS1-205ENST00000588780 SMAGPQ0VAQ4 97 aa12.9□□□□□ -0.34
CAPNS1-205ENST00000588780 FCER1GP30273 86 aa12.89□□□□□ -0.35
CAPNS1-205ENST00000588780 OR10D4PQ8NGN7 298 aa12.89□□□□□ -0.35
CAPNS1-205ENST00000588780 FAM210AQ96ND0 272 aa12.89□□□□□ -0.35
CAPNS1-205ENST00000588780 CDIP1Q9H305 208 aa12.89□□□□□ -0.35
CAPNS1-205ENST00000588780 TRBV20OR9-2A0A075B6H5 130 aa12.87□□□□□ -0.35
CAPNS1-205ENST00000588780 PDE6DO43924 150 aa12.86□□□□□ -0.35
CAPNS1-205ENST00000588780 TMEM241Q24JQ0 296 aa12.86□□□□□ -0.35
CAPNS1-205ENST00000588780 C10orf25Q5T742 122 aa12.85□□□□□ -0.35
CAPNS1-205ENST00000588780 UNQ6190/PRO20217Q6UXQ8 127 aa12.85□□□□□ -0.35
CAPNS1-205ENST00000588780 TYMSOSQ8TAI1 123 aa12.85□□□□□ -0.35
CAPNS1-205ENST00000588780 F8WDY8 70 aa12.84□□□□□ -0.35
CAPNS1-205ENST00000588780 ZNF861PO60384 105 aa12.84□□□□□ -0.35
CAPNS1-205ENST00000588780 RETNLBQ9BQ08 111 aa12.84□□□□□ -0.35
CAPNS1-205ENST00000588780 UBE2D4Q9Y2X8 147 aa12.84□□□□□ -0.35
CAPNS1-205ENST00000588780 TRBV27A0A0K0K1C4 114 aa12.83□□□□□ -0.36
CAPNS1-205ENST00000588780 TEX46H3BTG2 121 aa12.83□□□□□ -0.36
CAPNS1-205ENST00000588780 TLX1NBP0CAT3 122 aa12.83□□□□□ -0.36
CAPNS1-205ENST00000588780 POLR2KP53803 58 aaKnown RBP12.83□□□□□ -0.36
CAPNS1-205ENST00000588780 Q6ZUT4 128 aa12.83□□□□□ -0.36
CAPNS1-205ENST00000588780 BORCS7Q96B45 105 aa12.83□□□□□ -0.36
CAPNS1-205ENST00000588780 SMDT1Q9H4I9 107 aa12.83□□□□□ -0.36
CAPNS1-205ENST00000588780 CSDC2Q9Y534 153 aaKnown RBP12.83□□□□□ -0.36
CAPNS1-205ENST00000588780 SMLR1H3BR10 107 aa12.82□□□□□ -0.36
CAPNS1-205ENST00000588780 C6orf48Q9UBA6 75 aa12.82□□□□□ -0.36
CAPNS1-205ENST00000588780 KANTRA0A1W2PQU2 76 aa12.81□□□□□ -0.36
CAPNS1-205ENST00000588780 KRTAP7-1Q8IUC3 87 aa12.81□□□□□ -0.36
CAPNS1-205ENST00000588780 VCYO14598 125 aa12.8□□□□□ -0.36
CAPNS1-205ENST00000588780 CRYGAP11844 174 aa12.8□□□□□ -0.36
CAPNS1-205ENST00000588780 A0A087X002 238 aa12.78□□□□□ -0.36
CAPNS1-205ENST00000588780 GATCO43716 136 aaKnown RBP12.78□□□□□ -0.36
CAPNS1-205ENST00000588780 ZNF345Q14585 488 aa12.78□□□□□ -0.36
CAPNS1-205ENST00000588780 TMEM18Q96B42 140 aa12.78□□□□□ -0.36
CAPNS1-205ENST00000588780 KIR2DL4Q99706 377 aa12.78□□□□□ -0.36
CAPNS1-205ENST00000588780 CRCT1Q9UGL9 99 aa12.78□□□□□ -0.36
CAPNS1-205ENST00000588780 K7EN84 100 aa12.77□□□□□ -0.37
CAPNS1-205ENST00000588780 OCC1Q8TAD7 63 aa12.77□□□□□ -0.37
CAPNS1-205ENST00000588780 A8MWL6 223 aa12.76□□□□□ -0.37
CAPNS1-205ENST00000588780 FSIP2Q5CZC0 6907 aa12.75□□□□□ -0.37
CAPNS1-205ENST00000588780 SMKR1H3BMG3 65 aa12.74□□□□□ -0.37
CAPNS1-205ENST00000588780 NUPR1O60356 82 aa12.74□□□□□ -0.37
CAPNS1-205ENST00000588780 CTDSP1Q9GZU7 261 aa12.74□□□□□ -0.37
CAPNS1-205ENST00000588780 IGLV7-46A0A075B6I9 117 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms