RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 ORMDL3Q8N138 153 aa8.75□□□□□ -1.01
SS18-222ENST00000582792 GNB1LQ9BYB4 327 aa8.75□□□□□ -1.01
SS18-222ENST00000582792 LAMTOR2Q9Y2Q5 125 aa8.75□□□□□ -1.01
SS18-222ENST00000582792 I3L3M4 83 aa8.74□□□□□ -1.01
SS18-222ENST00000582792 GAS8-AS1O95177 125 aa8.74□□□□□ -1.01
SS18-222ENST00000582792 HLA-DQA1P01909 254 aa8.74□□□□□ -1.01
SS18-222ENST00000582792 MT1HL1P0DM35 61 aa8.74□□□□□ -1.01
SS18-222ENST00000582792 RPS10P46783 165 aaKnown RBP8.74□□□□□ -1.01
SS18-222ENST00000582792 LCE2DQ5TA82 110 aaPredicted RBP8.74□□□□□ -1.01
SS18-222ENST00000582792 D6R8Y8 96 aa8.73□□□□□ -1.01
SS18-222ENST00000582792 USP17L23D6RBM5 183 aa8.73□□□□□ -1.01
SS18-222ENST00000582792 TMEM262E9PQX1 116 aa8.73□□□□□ -1.01
SS18-222ENST00000582792 SMKR1H3BMG3 65 aa8.73□□□□□ -1.01
SS18-222ENST00000582792 VCYO14598 125 aa8.73□□□□□ -1.01
SS18-222ENST00000582792 TCAPO15273 167 aa8.73□□□□□ -1.01
SS18-222ENST00000582792 CRPP02741 224 aa8.73□□□□□ -1.01
SS18-222ENST00000582792 MT-ND6P03923 174 aa8.73□□□□□ -1.01
SS18-222ENST00000582792 PMCHP20382 165 aa8.73□□□□□ -1.01
SS18-222ENST00000582792 SUMO2P61956 95 aaKnown RBP8.73□□□□□ -1.01
SS18-222ENST00000582792 PRSS47A8MTI9 375 aa8.72□□□□□ -1.01
SS18-222ENST00000582792 H7C423 109 aa8.72□□□□□ -1.01
SS18-222ENST00000582792 TNFRSF6BO95407 300 aa8.72□□□□□ -1.01
SS18-222ENST00000582792 DGAT2L7PQ6IED9 249 aa8.72□□□□□ -1.01
SS18-222ENST00000582792 C9orf163Q8N9P6 203 aa8.72□□□□□ -1.01
SS18-222ENST00000582792 PRELID3AQ96N28 172 aa8.72□□□□□ -1.01
SS18-222ENST00000582792 TMEM243Q9BU79 118 aa8.72□□□□□ -1.01
SS18-222ENST00000582792 SMCO4Q9NRQ5 59 aa8.72□□□□□ -1.01
SS18-222ENST00000582792 RNF213Q63HN8 5207 aa8.72□□□□□ -1.01
SS18-222ENST00000582792 PRSS1P07477 247 aa8.71□□□□□ -1.02
SS18-222ENST00000582792 AMTP48728 403 aa8.71□□□□□ -1.02
SS18-222ENST00000582792 MPV17L2Q567V2 206 aa8.71□□□□□ -1.02
SS18-222ENST00000582792 YPEL4Q96NS1 127 aa8.71□□□□□ -1.02
SS18-222ENST00000582792 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.71□□□□□ -1.02
SS18-222ENST00000582792 LRP2P98164 4655 aa8.71□□□□□ -1.02
SS18-222ENST00000582792 A0A1B0GUV1 79 aa8.7□□□□□ -1.02
SS18-222ENST00000582792 NPYP01303 97 aa8.7□□□□□ -1.02
SS18-222ENST00000582792 APCSP02743 223 aa8.7□□□□□ -1.02
SS18-222ENST00000582792 ANGP03950 147 aaKnown RBP8.7□□□□□ -1.02
SS18-222ENST00000582792 Q6ZRU5 148 aa8.7□□□□□ -1.02
SS18-222ENST00000582792 KIR2DL4Q99706 377 aa8.7□□□□□ -1.02
SS18-222ENST00000582792 CHCHD5Q9BSY4 110 aa8.7□□□□□ -1.02
SS18-222ENST00000582792 PANO1I0J062 215 aa8.69□□□□□ -1.02
SS18-222ENST00000582792 TSHBP01222 138 aa8.69□□□□□ -1.02
SS18-222ENST00000582792 ESDP10768 282 aa8.69□□□□□ -1.02
SS18-222ENST00000582792 MIAQ16674 131 aa8.69□□□□□ -1.02
SS18-222ENST00000582792 SMIM2Q9BVW6 85 aa8.69□□□□□ -1.02
SS18-222ENST00000582792 TGIF2-C20orf24A0A0A6YYL0 155 aa8.68□□□□□ -1.02
SS18-222ENST00000582792 UBE2L6O14933 153 aa8.68□□□□□ -1.02
SS18-222ENST00000582792 SDIM1Q6ZPB5 146 aa8.68□□□□□ -1.02
SS18-222ENST00000582792 MAP1LC3AQ9H492 121 aa8.68□□□□□ -1.02
SS18-222ENST00000582792 GAGE6Q13070 117 aa8.67□□□□□ -1.02
SS18-222ENST00000582792 MRPL18Q9H0U6 180 aaKnown RBP8.67□□□□□ -1.02
SS18-222ENST00000582792 PRR34Q9NV39 138 aa8.67□□□□□ -1.02
SS18-222ENST00000582792 K7EMI3 77 aa8.66□□□□□ -1.02
SS18-222ENST00000582792 ZNF25P17030 456 aaPredicted RBP8.66□□□□□ -1.02
SS18-222ENST00000582792 FCER1GP30273 86 aa8.66□□□□□ -1.02
SS18-222ENST00000582792 RBX1P62877 108 aa8.66□□□□□ -1.02
SS18-222ENST00000582792 SMAGPQ0VAQ4 97 aa8.66□□□□□ -1.02
SS18-222ENST00000582792 FABP9Q0Z7S8 132 aa8.66□□□□□ -1.02
SS18-222ENST00000582792 CIRBPQ14011 172 aaKnown RBP8.66□□□□□ -1.02
SS18-222ENST00000582792 KRTAP26-1Q6PEX3 210 aa8.66□□□□□ -1.02
SS18-222ENST00000582792 Q8N8P6 123 aa8.66□□□□□ -1.02
SS18-222ENST00000582792 TNXBP22105 4242 aa8.66□□□□□ -1.02
SS18-222ENST00000582792 MRPL52Q86TS9 123 aaKnown RBP8.65□□□□□ -1.02
SS18-222ENST00000582792 CBLN2Q8IUK8 224 aa8.65□□□□□ -1.02
SS18-222ENST00000582792 TMEM18Q96B42 140 aa8.65□□□□□ -1.02
SS18-222ENST00000582792 ALKBH7Q9BT30 221 aaPredicted RBP8.65□□□□□ -1.02
SS18-222ENST00000582792 TRAPPC1Q9Y5R8 145 aa8.65□□□□□ -1.02
SS18-222ENST00000582792 KIAA1644Q3SXP7 199 aa8.64□□□□□ -1.03
SS18-222ENST00000582792 CLPSL2Q6UWE3 100 aa8.64□□□□□ -1.03
SS18-222ENST00000582792 NXT2Q9NPJ8 142 aaKnown RBP8.64□□□□□ -1.03
SS18-222ENST00000582792 CSDC2Q9Y534 153 aaKnown RBP8.64□□□□□ -1.03
SS18-222ENST00000582792 FGF6P10767 208 aa8.63□□□□□ -1.03
SS18-222ENST00000582792 RAB5AP20339 215 aa8.63□□□□□ -1.03
SS18-222ENST00000582792 CNBPP62633 177 aaKnown RBP8.63□□□□□ -1.03
SS18-222ENST00000582792 AMMECR1LQ6DCA0 310 aa8.63□□□□□ -1.03
SS18-222ENST00000582792 LINC00269Q8N2A0 174 aa8.63□□□□□ -1.03
SS18-222ENST00000582792 C20orf203Q8NBC4 194 aa8.63□□□□□ -1.03
SS18-222ENST00000582792 TIMM21Q9BVV7 248 aa8.63□□□□□ -1.03
SS18-222ENST00000582792 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.62□□□□□ -1.03
SS18-222ENST00000582792 IGKV2-29A2NJV5 120 aaPredicted RBP8.62□□□□□ -1.03
SS18-222ENST00000582792 S100A1P23297 94 aa8.62□□□□□ -1.03
SS18-222ENST00000582792 TMEM101Q96IK0 257 aa8.62□□□□□ -1.03
SS18-222ENST00000582792 IGLV4-60A0A075B6I1 120 aa8.61□□□□□ -1.03
SS18-222ENST00000582792 LOC389332A0A1B0GUA5 103 aa8.61□□□□□ -1.03
SS18-222ENST00000582792 LINC01546A6NGU7 62 aa8.61□□□□□ -1.03
SS18-222ENST00000582792 G0S2P27469 103 aa8.61□□□□□ -1.03
SS18-222ENST00000582792 ORMDL2Q53FV1 153 aa8.61□□□□□ -1.03
SS18-222ENST00000582792 IGHV3-64A0A075B6Q5 118 aa8.6□□□□□ -1.03
SS18-222ENST00000582792 A0A087WYN8 130 aa8.6□□□□□ -1.03
SS18-222ENST00000582792 TRAV8-4A0A0B4J246 113 aa8.6□□□□□ -1.03
SS18-222ENST00000582792 hDV102S1A0JD36 115 aa8.6□□□□□ -1.03
SS18-222ENST00000582792 COLCA2A8K830 154 aa8.6□□□□□ -1.03
SS18-222ENST00000582792 IFI27P40305 119 aaPredicted RBP8.6□□□□□ -1.03
SS18-222ENST00000582792 RNASEKQ6P5S7 137 aaKnown RBP8.6□□□□□ -1.03
SS18-222ENST00000582792 OR5A1Q8NGJ0 315 aa8.6□□□□□ -1.03
SS18-222ENST00000582792 IGLV10-54A0A075B6I4 117 aa8.59□□□□□ -1.03
SS18-222ENST00000582792 LINC01549A6NIU2 74 aa8.59□□□□□ -1.03
SS18-222ENST00000582792 CHTF8P0CG12 524 aa8.59□□□□□ -1.03
SS18-222ENST00000582792 REG3AQ06141 175 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms