RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 TMEM97Q5BJF2 176 aa9.42□□□□□ -0.9
CSNK1D-220ENST00000581737 ATOH7Q8N100 152 aa9.42□□□□□ -0.9
CSNK1D-220ENST00000581737 APLNQ9ULZ1 77 aa9.42□□□□□ -0.9
CSNK1D-220ENST00000581737 HHLA3Q9XRX5 114 aa9.42□□□□□ -0.9
CSNK1D-220ENST00000581737 TRBV7-3A0A075B6L6 115 aa9.41□□□□□ -0.9
CSNK1D-220ENST00000581737 F8VRH5 84 aa9.41□□□□□ -0.9
CSNK1D-220ENST00000581737 PAX4O43316 350 aa9.41□□□□□ -0.9
CSNK1D-220ENST00000581737 CRYBA4P53673 196 aa9.41□□□□□ -0.9
CSNK1D-220ENST00000581737 NEGR1Q7Z3B1 354 aa9.41□□□□□ -0.9
CSNK1D-220ENST00000581737 C20orf203Q8NBC4 194 aa9.41□□□□□ -0.9
CSNK1D-220ENST00000581737 TSHBP01222 138 aa9.4□□□□□ -0.9
CSNK1D-220ENST00000581737 ODF1Q14990 250 aa9.4□□□□□ -0.9
CSNK1D-220ENST00000581737 SPANXA1Q9NS26 97 aa9.4□□□□□ -0.9
CSNK1D-220ENST00000581737 CHTOPQ9Y3Y2 248 aaKnown RBP9.4□□□□□ -0.9
CSNK1D-220ENST00000581737 A0A0J9YY99 117 aa9.39□□□□□ -0.91
CSNK1D-220ENST00000581737 HNRNPA3P51991 378 aaKnown RBP9.39□□□□□ -0.91
CSNK1D-220ENST00000581737 PMVKQ15126 192 aa9.39□□□□□ -0.91
CSNK1D-220ENST00000581737 PYGO1Q9Y3Y4 419 aa9.39□□□□□ -0.91
CSNK1D-220ENST00000581737 ICOSQ9Y6W8 199 aa9.39□□□□□ -0.91
CSNK1D-220ENST00000581737 HSPG2P98160 4391 aa9.38□□□□□ -0.91
CSNK1D-220ENST00000581737 P0DMU3 169 aa9.38□□□□□ -0.91
CSNK1D-220ENST00000581737 FAM231AP0DMU4 169 aa9.38□□□□□ -0.91
CSNK1D-220ENST00000581737 FAM231CP0DMU5 169 aa9.38□□□□□ -0.91
CSNK1D-220ENST00000581737 IGLC3P0DOY3 106 aa9.38□□□□□ -0.91
CSNK1D-220ENST00000581737 HERVK_113P61574 105 aa9.38□□□□□ -0.91
CSNK1D-220ENST00000581737 SLC25A34Q6PIV7 304 aa9.38□□□□□ -0.91
CSNK1D-220ENST00000581737 ZNRF2Q8NHG8 242 aa9.38□□□□□ -0.91
CSNK1D-220ENST00000581737 BAALCQ8WXS3 180 aa9.38□□□□□ -0.91
CSNK1D-220ENST00000581737 VSIG2Q96IQ7 327 aa9.38□□□□□ -0.91
CSNK1D-220ENST00000581737 LINC00587B1AMM8 73 aa9.37□□□□□ -0.91
CSNK1D-220ENST00000581737 MRPL23Q16540 153 aaKnown RBP9.37□□□□□ -0.91
CSNK1D-220ENST00000581737 SH2D6Q7Z4S9 175 aa9.37□□□□□ -0.91
CSNK1D-220ENST00000581737 hDV102S1A0JD36 115 aa9.36□□□□□ -0.91
CSNK1D-220ENST00000581737 IGIPA6NJ69 53 aa9.36□□□□□ -0.91
CSNK1D-220ENST00000581737 GYPEP15421 78 aa9.36□□□□□ -0.91
CSNK1D-220ENST00000581737 LBHQ53QV2 105 aaPredicted RBP9.36□□□□□ -0.91
CSNK1D-220ENST00000581737 SLC25A29Q8N8R3 303 aa9.36□□□□□ -0.91
CSNK1D-220ENST00000581737 C2orf88Q9BSF0 95 aa9.36□□□□□ -0.91
CSNK1D-220ENST00000581737 TIMM21Q9BVV7 248 aa9.36□□□□□ -0.91
CSNK1D-220ENST00000581737 MRPL35Q9NZE8 188 aaKnown RBP9.36□□□□□ -0.91
CSNK1D-220ENST00000581737 A0A096LPF7 62 aa9.35□□□□□ -0.91
CSNK1D-220ENST00000581737 H7C423 109 aa9.35□□□□□ -0.91
CSNK1D-220ENST00000581737 UBE2L6O14933 153 aa9.35□□□□□ -0.91
CSNK1D-220ENST00000581737 UBE2D3P61077 147 aa9.35□□□□□ -0.91
CSNK1D-220ENST00000581737 UBE2D2P62837 147 aa9.35□□□□□ -0.91
CSNK1D-220ENST00000581737 DGAT2L7PQ6IED9 249 aa9.35□□□□□ -0.91
CSNK1D-220ENST00000581737 Q6ZSN1 163 aa9.35□□□□□ -0.91
CSNK1D-220ENST00000581737 UBE2DNLQ8IWF7 75 aa9.35□□□□□ -0.91
CSNK1D-220ENST00000581737 GTSF1LQ9H1H1 148 aa9.35□□□□□ -0.91
CSNK1D-220ENST00000581737 VCX2Q9H322 139 aa9.35□□□□□ -0.91
CSNK1D-220ENST00000581737 GAGE12JA6NER3 117 aa9.34□□□□□ -0.91
CSNK1D-220ENST00000581737 PRSS29PA6NIE9 313 aa9.34□□□□□ -0.91
CSNK1D-220ENST00000581737 COX8AP10176 69 aa9.34□□□□□ -0.91
CSNK1D-220ENST00000581737 CCL18P55774 89 aa9.34□□□□□ -0.91
CSNK1D-220ENST00000581737 RPL39P62891 51 aaKnown RBP9.34□□□□□ -0.91
CSNK1D-220ENST00000581737 GAGE1Q13065 139 aa9.34□□□□□ -0.91
CSNK1D-220ENST00000581737 GAGE4Q13068 117 aa9.34□□□□□ -0.91
CSNK1D-220ENST00000581737 GAGE5Q13069 117 aa9.34□□□□□ -0.91
CSNK1D-220ENST00000581737 GAGE13Q4V321 117 aa9.34□□□□□ -0.91
CSNK1D-220ENST00000581737 TRBV25-1A0A075B6N4 114 aa9.33□□□□□ -0.92
CSNK1D-220ENST00000581737 M0R143 59 aa9.33□□□□□ -0.92
CSNK1D-220ENST00000581737 ZC2HC1BQ5TFG8 222 aa9.33□□□□□ -0.92
CSNK1D-220ENST00000581737 TMEM101Q96IK0 257 aa9.33□□□□□ -0.92
CSNK1D-220ENST00000581737 MRPS16Q9Y3D3 137 aaKnown RBP9.33□□□□□ -0.92
CSNK1D-220ENST00000581737 DLEU1O43261 78 aa9.32□□□□□ -0.92
CSNK1D-220ENST00000581737 MRPS36P82909 103 aaKnown RBP9.32□□□□□ -0.92
CSNK1D-220ENST00000581737 MAJINQ3KP22 176 aa9.32□□□□□ -0.92
CSNK1D-220ENST00000581737 AMMECR1LQ6DCA0 310 aa9.32□□□□□ -0.92
CSNK1D-220ENST00000581737 C14orf144Q96I85 54 aa9.32□□□□□ -0.92
CSNK1D-220ENST00000581737 TMEM243Q9BU79 118 aa9.32□□□□□ -0.92
CSNK1D-220ENST00000581737 CST9LQ9H4G1 147 aa9.32□□□□□ -0.92
CSNK1D-220ENST00000581737 ZNF25P17030 456 aaPredicted RBP9.31□□□□□ -0.92
CSNK1D-220ENST00000581737 NMUP48645 174 aa9.31□□□□□ -0.92
CSNK1D-220ENST00000581737 SEC11AP67812 179 aa9.31□□□□□ -0.92
CSNK1D-220ENST00000581737 CHCHD7Q9BUK0 85 aa9.31□□□□□ -0.92
CSNK1D-220ENST00000581737 KRTAP4-5Q9BYR2 181 aa9.31□□□□□ -0.92
CSNK1D-220ENST00000581737 IGLV4-3A0A075B6K6 122 aa9.3□□□□□ -0.92
CSNK1D-220ENST00000581737 IGHV3-38A0A0C4DH36 116 aa9.3□□□□□ -0.92
CSNK1D-220ENST00000581737 LOC100131303A0A0U1RQF7 123 aa9.3□□□□□ -0.92
CSNK1D-220ENST00000581737 C11orf86A6NJI1 115 aa9.3□□□□□ -0.92
CSNK1D-220ENST00000581737 SIVA1O15304 175 aa9.3□□□□□ -0.92
CSNK1D-220ENST00000581737 UBE2D4Q9Y2X8 147 aa9.3□□□□□ -0.92
CSNK1D-220ENST00000581737 CSDC2Q9Y534 153 aaKnown RBP9.3□□□□□ -0.92
CSNK1D-220ENST00000581737 LRP1BQ9NZR2 4599 aa9.29□□□□□ -0.92
CSNK1D-220ENST00000581737 TIRAPP58753 221 aa9.29□□□□□ -0.92
CSNK1D-220ENST00000581737 ANKRD39Q53RE8 183 aa9.29□□□□□ -0.92
CSNK1D-220ENST00000581737 NFE4Q86UQ8 179 aa9.29□□□□□ -0.92
CSNK1D-220ENST00000581737 STPG4Q8N801 248 aa9.29□□□□□ -0.92
CSNK1D-220ENST00000581737 OR5A1Q8NGJ0 315 aa9.29□□□□□ -0.92
CSNK1D-220ENST00000581737 CHAC1Q9BUX1 264 aa9.29□□□□□ -0.92
CSNK1D-220ENST00000581737 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.28□□□□□ -0.92
CSNK1D-220ENST00000581737 A0A1B0GVY2 172 aa9.28□□□□□ -0.92
CSNK1D-220ENST00000581737 IGKV2-29A2NJV5 120 aaPredicted RBP9.28□□□□□ -0.92
CSNK1D-220ENST00000581737 LINC00694P0DN24 101 aa9.28□□□□□ -0.92
CSNK1D-220ENST00000581737 ESRGQ1W209 222 aa9.28□□□□□ -0.92
CSNK1D-220ENST00000581737 BOD1L2Q8IYS8 172 aa9.28□□□□□ -0.92
CSNK1D-220ENST00000581737 ATP6V0E2Q8NHE4 81 aa9.28□□□□□ -0.92
CSNK1D-220ENST00000581737 LINC00588Q9Y4M8 146 aa9.28□□□□□ -0.92
CSNK1D-220ENST00000581737 HERC1Q15751 4861 aa9.28□□□□□ -0.92
CSNK1D-220ENST00000581737 CTAG1AP78358 180 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms