RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 HIST1H2BBP33778 126 aa8.19□□□□□ -1.1
CCDC84-209ENST00000580556 HIST1H2BDP58876 126 aa8.19□□□□□ -1.1
CCDC84-209ENST00000580556 HIST1H2BCP62807 126 aa8.19□□□□□ -1.1
CCDC84-209ENST00000580556 HIST2H2BEQ16778 126 aa8.19□□□□□ -1.1
CCDC84-209ENST00000580556 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.19□□□□□ -1.1
CCDC84-209ENST00000580556 AMMECR1LQ6DCA0 310 aa8.19□□□□□ -1.1
CCDC84-209ENST00000580556 Q8N3U1 123 aa8.19□□□□□ -1.1
CCDC84-209ENST00000580556 HIST1H2BHQ93079 126 aa8.19□□□□□ -1.1
CCDC84-209ENST00000580556 HIST1H2BNQ99877 126 aa8.19□□□□□ -1.1
CCDC84-209ENST00000580556 HIST1H2BMQ99879 126 aa8.19□□□□□ -1.1
CCDC84-209ENST00000580556 KRTAP1-5Q9BYS1 174 aa8.19□□□□□ -1.1
CCDC84-209ENST00000580556 SPANXA1Q9NS26 97 aa8.19□□□□□ -1.1
CCDC84-209ENST00000580556 CYSLTR1Q9Y271 337 aa8.19□□□□□ -1.1
CCDC84-209ENST00000580556 UBE2D4Q9Y2X8 147 aa8.19□□□□□ -1.1
CCDC84-209ENST00000580556 IBA57-AS1B1ANH7 110 aa8.18□□□□□ -1.1
CCDC84-209ENST00000580556 CDK2AP2O75956 126 aa8.18□□□□□ -1.1
CCDC84-209ENST00000580556 IGHV3-30P01768 117 aa8.18□□□□□ -1.1
CCDC84-209ENST00000580556 IGHV3-33P01772 117 aa8.18□□□□□ -1.1
CCDC84-209ENST00000580556 NPSP0C0P6 89 aa8.18□□□□□ -1.1
CCDC84-209ENST00000580556 IGHV3-30-3P0DP02 117 aa8.18□□□□□ -1.1
CCDC84-209ENST00000580556 IGHV3-30-5P0DP03 117 aa8.18□□□□□ -1.1
CCDC84-209ENST00000580556 BAGE3Q86Y29 109 aa8.18□□□□□ -1.1
CCDC84-209ENST00000580556 Q8N976 141 aa8.18□□□□□ -1.1
CCDC84-209ENST00000580556 TMEM101Q96IK0 257 aa8.18□□□□□ -1.1
CCDC84-209ENST00000580556 PYGO1Q9Y3Y4 419 aa8.18□□□□□ -1.1
CCDC84-209ENST00000580556 C16orf90A8MZG2 172 aa8.17□□□□□ -1.1
CCDC84-209ENST00000580556 C1orf196B1AJZ1 125 aa8.17□□□□□ -1.1
CCDC84-209ENST00000580556 RPL39P62891 51 aaKnown RBP8.17□□□□□ -1.1
CCDC84-209ENST00000580556 RNASEKQ6P5S7 137 aaKnown RBP8.17□□□□□ -1.1
CCDC84-209ENST00000580556 C2orf66Q6UXQ4 117 aa8.17□□□□□ -1.1
CCDC84-209ENST00000580556 Q8N1X5 172 aa8.17□□□□□ -1.1
CCDC84-209ENST00000580556 OR5A1Q8NGJ0 315 aa8.17□□□□□ -1.1
CCDC84-209ENST00000580556 TOMM6Q96B49 74 aa8.17□□□□□ -1.1
CCDC84-209ENST00000580556 PRR34Q9NV39 138 aa8.17□□□□□ -1.1
CCDC84-209ENST00000580556 IGLV4-60A0A075B6I1 120 aa8.16□□□□□ -1.1
CCDC84-209ENST00000580556 MRPS36P82909 103 aaKnown RBP8.16□□□□□ -1.1
CCDC84-209ENST00000580556 DGAT2L7PQ6IED9 249 aa8.16□□□□□ -1.1
CCDC84-209ENST00000580556 KLK12Q9UKR0 248 aa8.16□□□□□ -1.1
CCDC84-209ENST00000580556 A0A096LNJ9 63 aa8.15□□□□□ -1.1
CCDC84-209ENST00000580556 TRAV8-3A0A0A6YYJ7 113 aa8.15□□□□□ -1.1
CCDC84-209ENST00000580556 HBDP02042 147 aa8.15□□□□□ -1.1
CCDC84-209ENST00000580556 ANGP03950 147 aaKnown RBP8.15□□□□□ -1.1
CCDC84-209ENST00000580556 ZNF664Q8N3J9 261 aa8.15□□□□□ -1.1
CCDC84-209ENST00000580556 TIMM17AQ99595 171 aa8.15□□□□□ -1.1
CCDC84-209ENST00000580556 CDC42SE2Q9NRR3 84 aa8.15□□□□□ -1.1
CCDC84-209ENST00000580556 IGIPA6NJ69 53 aa8.14□□□□□ -1.11
CCDC84-209ENST00000580556 SERF1AO75920 110 aa8.14□□□□□ -1.11
CCDC84-209ENST00000580556 CRPP02741 224 aa8.14□□□□□ -1.11
CCDC84-209ENST00000580556 LINC00310P59036 64 aa8.14□□□□□ -1.11
CCDC84-209ENST00000580556 TNP2Q05952 138 aa8.14□□□□□ -1.11
CCDC84-209ENST00000580556 MIAQ16674 131 aa8.14□□□□□ -1.11
CCDC84-209ENST00000580556 COA6Q5JTJ3 125 aaKnown RBP8.14□□□□□ -1.11
CCDC84-209ENST00000580556 ERASQ7Z444 233 aa8.14□□□□□ -1.11
CCDC84-209ENST00000580556 NFE4Q86UQ8 179 aa8.14□□□□□ -1.11
CCDC84-209ENST00000580556 LINC00269Q8N2A0 174 aa8.14□□□□□ -1.11
CCDC84-209ENST00000580556 FAT1Q14517 4588 aa8.14□□□□□ -1.11
CCDC84-209ENST00000580556 HSBP1O75506 76 aa8.13□□□□□ -1.11
CCDC84-209ENST00000580556 REG3AQ06141 175 aa8.13□□□□□ -1.11
CCDC84-209ENST00000580556 PAPPA-AS1Q5QFB9 102 aa8.13□□□□□ -1.11
CCDC84-209ENST00000580556 ENHOQ6UWT2 76 aa8.13□□□□□ -1.11
CCDC84-209ENST00000580556 Q6ZUT4 128 aa8.13□□□□□ -1.11
CCDC84-209ENST00000580556 C6orf223Q8N319 242 aa8.13□□□□□ -1.11
CCDC84-209ENST00000580556 FAM104AQ969W3 186 aa8.13□□□□□ -1.11
CCDC84-209ENST00000580556 TMEM141Q96I45 108 aa8.13□□□□□ -1.11
CCDC84-209ENST00000580556 IGLV4-3A0A075B6K6 122 aa8.12□□□□□ -1.11
CCDC84-209ENST00000580556 TRAV8-4A0A0B4J246 113 aa8.12□□□□□ -1.11
CCDC84-209ENST00000580556 CCL25O15444 150 aa8.12□□□□□ -1.11
CCDC84-209ENST00000580556 PDZD11Q5EBL8 140 aa8.12□□□□□ -1.11
CCDC84-209ENST00000580556 C1orf134Q5TEV5 83 aa8.12□□□□□ -1.11
CCDC84-209ENST00000580556 UBE2WQ96B02 151 aa8.12□□□□□ -1.11
CCDC84-209ENST00000580556 RMI2Q96E14 147 aa8.12□□□□□ -1.11
CCDC84-209ENST00000580556 SCGB3A1Q96QR1 104 aa8.12□□□□□ -1.11
CCDC84-209ENST00000580556 MYCBP2O75592 4640 aa8.12□□□□□ -1.11
CCDC84-209ENST00000580556 UBR4Q5T4S7 5183 aa8.12□□□□□ -1.11
CCDC84-209ENST00000580556 Q6ZN92 141 aa8.11□□□□□ -1.11
CCDC84-209ENST00000580556 COX11Q9Y6N1 276 aa8.11□□□□□ -1.11
CCDC84-209ENST00000580556 ATP5LO75964 103 aa8.1□□□□□ -1.11
CCDC84-209ENST00000580556 PMCHL1Q16048 86 aa8.1□□□□□ -1.11
CCDC84-209ENST00000580556 Q6ZRN7 208 aaPredicted RBP8.1□□□□□ -1.11
CCDC84-209ENST00000580556 AMELXQ99217 191 aa8.1□□□□□ -1.11
CCDC84-209ENST00000580556 TM2D2Q9BX73 214 aa8.1□□□□□ -1.11
CCDC84-209ENST00000580556 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.09□□□□□ -1.11
CCDC84-209ENST00000580556 NUPR1O60356 82 aa8.09□□□□□ -1.11
CCDC84-209ENST00000580556 CLPSL2Q6UWE3 100 aa8.09□□□□□ -1.11
CCDC84-209ENST00000580556 TEX43Q6ZNM6 134 aa8.09□□□□□ -1.11
CCDC84-209ENST00000580556 PACRGQ96M98 296 aaPredicted RBP8.09□□□□□ -1.11
CCDC84-209ENST00000580556 OPRPNQ99935 248 aaPredicted RBP8.09□□□□□ -1.11
CCDC84-209ENST00000580556 C1orf43Q9BWL3 253 aa8.09□□□□□ -1.11
CCDC84-209ENST00000580556 Q9HAA7 133 aa8.09□□□□□ -1.11
CCDC84-209ENST00000580556 DMBT1Q9UGM3 2413 aaPredicted RBP8.09□□□□□ -1.11
CCDC84-209ENST00000580556 LINC00959A0A1B0GUT2 108 aa8.08□□□□□ -1.12
CCDC84-209ENST00000580556 RNASE13Q5GAN3 156 aaKnown RBP8.08□□□□□ -1.12
CCDC84-209ENST00000580556 LINC00173Q6ZV60 143 aa8.08□□□□□ -1.12
CCDC84-209ENST00000580556 FAM19A2Q8N3H0 131 aa8.08□□□□□ -1.12
CCDC84-209ENST00000580556 C2orf88Q9BSF0 95 aa8.08□□□□□ -1.12
CCDC84-209ENST00000580556 VCX2Q9H322 139 aa8.08□□□□□ -1.12
CCDC84-209ENST00000580556 IGKV2D-24A0A075B6R9 120 aa8.07□□□□□ -1.12
CCDC84-209ENST00000580556 IFITM10A6NMD0 228 aa8.07□□□□□ -1.12
CCDC84-209ENST00000580556 NDUFA6P56556 154 aa8.07□□□□□ -1.12
CCDC84-209ENST00000580556 SS18Q15532 418 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms