RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 RETNLBQ9BQ08 111 aa3.65□□□□□ -1.83
PPP4R1-216ENST00000580283 SEC22CQ9BRL7 303 aa3.65□□□□□ -1.83
PPP4R1-216ENST00000580283 RPP21Q9H633 154 aaKnown RBP3.65□□□□□ -1.83
PPP4R1-216ENST00000580283 PRO0461Q9UI25 63 aa3.65□□□□□ -1.83
PPP4R1-216ENST00000580283 TMSB15BA0A087X1C1 80 aa3.64□□□□□ -1.83
PPP4R1-216ENST00000580283 IGKV3OR2-268A0A0C4DH90 116 aa3.64□□□□□ -1.83
PPP4R1-216ENST00000580283 MUC21A0A140T8X8 626 aa3.64□□□□□ -1.83
PPP4R1-216ENST00000580283 ARL14EPLP0DKL9 152 aa3.64□□□□□ -1.83
PPP4R1-216ENST00000580283 TPT1P13693 172 aaKnown RBP3.64□□□□□ -1.83
PPP4R1-216ENST00000580283 TMBIM6P55061 237 aa3.64□□□□□ -1.83
PPP4R1-216ENST00000580283 ZNF56Q15929 161 aa3.64□□□□□ -1.83
PPP4R1-216ENST00000580283 KRTAP19-2Q3LHN2 52 aa3.64□□□□□ -1.83
PPP4R1-216ENST00000580283 ZFP82Q8N141 532 aa3.64□□□□□ -1.83
PPP4R1-216ENST00000580283 OR10AG1Q8NH19 301 aa3.64□□□□□ -1.83
PPP4R1-216ENST00000580283 CHCHD10Q8WYQ3 142 aaPredicted RBP3.64□□□□□ -1.83
PPP4R1-216ENST00000580283 CARD19Q96LW7 228 aa3.64□□□□□ -1.83
PPP4R1-216ENST00000580283 WFDC1Q9HC57 220 aa3.64□□□□□ -1.83
PPP4R1-216ENST00000580283 TRAV1-1A0A0B4J248 108 aa3.63□□□□□ -1.83
PPP4R1-216ENST00000580283 NAP1L6A6NFF2 107 aa3.63□□□□□ -1.83
PPP4R1-216ENST00000580283 C17orf112F2Z3M2 114 aa3.63□□□□□ -1.83
PPP4R1-216ENST00000580283 M0QY20 66 aa3.63□□□□□ -1.83
PPP4R1-216ENST00000580283 STAG3L2P0CL84 134 aa3.63□□□□□ -1.83
PPP4R1-216ENST00000580283 STAG3L3P0CL85 134 aa3.63□□□□□ -1.83
PPP4R1-216ENST00000580283 BCL2P10415 239 aa3.63□□□□□ -1.83
PPP4R1-216ENST00000580283 SULT1A2P50226 295 aa3.63□□□□□ -1.83
PPP4R1-216ENST00000580283 DEFA3P59666 94 aa3.63□□□□□ -1.83
PPP4R1-216ENST00000580283 SYCNQ0VAF6 134 aa3.63□□□□□ -1.83
PPP4R1-216ENST00000580283 TPRXLQ17RH7 258 aa3.63□□□□□ -1.83
PPP4R1-216ENST00000580283 LCE3AQ5TA76 89 aa3.63□□□□□ -1.83
PPP4R1-216ENST00000580283 FAM210AQ96ND0 272 aa3.63□□□□□ -1.83
PPP4R1-216ENST00000580283 FLGP20930 4061 aaPredicted RBP3.62□□□□□ -1.83
PPP4R1-216ENST00000580283 LOC107984640A0A0U1RRK4 108 aa3.62□□□□□ -1.83
PPP4R1-216ENST00000580283 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.62□□□□□ -1.83
PPP4R1-216ENST00000580283 K7EQM0 130 aa3.62□□□□□ -1.83
PPP4R1-216ENST00000580283 PLA2G10O15496 165 aa3.62□□□□□ -1.83
PPP4R1-216ENST00000580283 SIX6O95475 246 aa3.62□□□□□ -1.83
PPP4R1-216ENST00000580283 KRTAP5-9P26371 169 aa3.62□□□□□ -1.83
PPP4R1-216ENST00000580283 GCHFRP30047 84 aa3.62□□□□□ -1.83
PPP4R1-216ENST00000580283 RPL13AP40429 203 aaKnown RBP3.62□□□□□ -1.83
PPP4R1-216ENST00000580283 MEF2BQ02080 365 aaPredicted RBP3.62□□□□□ -1.83
PPP4R1-216ENST00000580283 TMEM243Q9BU79 118 aa3.62□□□□□ -1.83
PPP4R1-216ENST00000580283 KCNIP2Q9NS61 270 aa3.62□□□□□ -1.83
PPP4R1-216ENST00000580283 CARHSP1Q9Y2V2 147 aaKnown RBP3.62□□□□□ -1.83
PPP4R1-216ENST00000580283 TRAV6A0A075B6T7 132 aa3.61□□□□□ -1.83
PPP4R1-216ENST00000580283 A0A1W2PPV4 95 aa3.61□□□□□ -1.83
PPP4R1-216ENST00000580283 SNAI2O43623 268 aa3.61□□□□□ -1.83
PPP4R1-216ENST00000580283 UBE2D1P51668 147 aa3.61□□□□□ -1.83
PPP4R1-216ENST00000580283 SSTP61278 116 aa3.61□□□□□ -1.83
PPP4R1-216ENST00000580283 MT1HP80294 61 aa3.61□□□□□ -1.83
PPP4R1-216ENST00000580283 Q86TA4 180 aa3.61□□□□□ -1.83
PPP4R1-216ENST00000580283 NUP35Q8NFH5 326 aa3.61□□□□□ -1.83
PPP4R1-216ENST00000580283 LINC00167Q96N53 147 aa3.61□□□□□ -1.83
PPP4R1-216ENST00000580283 SSPOA2VEC9 5147 aa3.6□□□□□ -1.83
PPP4R1-216ENST00000580283 IGLV4-69A0A075B6H9 119 aa3.6□□□□□ -1.83
PPP4R1-216ENST00000580283 NKX2-5P52952 324 aaPredicted RBP3.6□□□□□ -1.83
PPP4R1-216ENST00000580283 FAM162BQ5T6X4 162 aa3.6□□□□□ -1.83
PPP4R1-216ENST00000580283 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.6□□□□□ -1.83
PPP4R1-216ENST00000580283 MRPS26Q9BYN8 205 aaKnown RBP3.6□□□□□ -1.83
PPP4R1-216ENST00000580283 SMIM3Q9BZL3 60 aa3.6□□□□□ -1.83
PPP4R1-216ENST00000580283 HSPB11Q9Y547 144 aa3.6□□□□□ -1.83
PPP4R1-216ENST00000580283 FCGBPQ9Y6R7 5405 aaPredicted RBP3.6□□□□□ -1.83
PPP4R1-216ENST00000580283 IGHV1-58A0A0C4DH39 117 aa3.59□□□□□ -1.83
PPP4R1-216ENST00000580283 A0A1W2PRE2 83 aa3.59□□□□□ -1.83
PPP4R1-216ENST00000580283 PEX7O00628 323 aa3.59□□□□□ -1.83
PPP4R1-216ENST00000580283 FGF6P10767 208 aa3.59□□□□□ -1.83
PPP4R1-216ENST00000580283 CRYGAP11844 174 aa3.59□□□□□ -1.83
PPP4R1-216ENST00000580283 XCL1P47992 114 aa3.59□□□□□ -1.83
PPP4R1-216ENST00000580283 EIF5AP63241 154 aaKnown RBP3.59□□□□□ -1.83
PPP4R1-216ENST00000580283 ASB16-AS1Q495Z4 193 aa3.59□□□□□ -1.83
PPP4R1-216ENST00000580283 KRTAP13-2Q52LG2 175 aa3.59□□□□□ -1.83
PPP4R1-216ENST00000580283 OR5A1Q8NGJ0 315 aa3.59□□□□□ -1.83
PPP4R1-216ENST00000580283 PGLYRP4Q96LB8 373 aa3.59□□□□□ -1.83
PPP4R1-216ENST00000580283 USH2AO75445 5202 aa3.59□□□□□ -1.83
PPP4R1-216ENST00000580283 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.84
PPP4R1-216ENST00000580283 LINC00959A0A1B0GUT2 108 aa3.58□□□□□ -1.84
PPP4R1-216ENST00000580283 CCL25O15444 150 aa3.58□□□□□ -1.84
PPP4R1-216ENST00000580283 OR5AL1P0C617 328 aa3.58□□□□□ -1.84
PPP4R1-216ENST00000580283 CDC34P49427 236 aaPredicted RBP3.58□□□□□ -1.84
PPP4R1-216ENST00000580283 Q6ZVH6 145 aa3.58□□□□□ -1.84
PPP4R1-216ENST00000580283 SCGB1C1Q8TD33 95 aa3.58□□□□□ -1.84
PPP4R1-216ENST00000580283 PKIGQ9Y2B9 76 aa3.58□□□□□ -1.84
PPP4R1-216ENST00000580283 ZFP30Q9Y2G7 519 aa3.58□□□□□ -1.84
PPP4R1-216ENST00000580283 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.57□□□□□ -1.84
PPP4R1-216ENST00000580283 IGKV2-29A2NJV5 120 aaPredicted RBP3.57□□□□□ -1.84
PPP4R1-216ENST00000580283 UBE2L6O14933 153 aa3.57□□□□□ -1.84
PPP4R1-216ENST00000580283 NOL3O60936 208 aaKnown RBP3.57□□□□□ -1.84
PPP4R1-216ENST00000580283 APOMO95445 188 aa3.57□□□□□ -1.84
PPP4R1-216ENST00000580283 LTAP01374 205 aa3.57□□□□□ -1.84
PPP4R1-216ENST00000580283 IL7P13232 177 aa3.57□□□□□ -1.84
PPP4R1-216ENST00000580283 UBE2G2P60604 165 aa3.57□□□□□ -1.84
PPP4R1-216ENST00000580283 RPL18AQ02543 176 aaKnown RBP3.57□□□□□ -1.84
PPP4R1-216ENST00000580283 ZNF726P1Q15940 193 aa3.57□□□□□ -1.84
PPP4R1-216ENST00000580283 TRIQKQ629K1 86 aa3.57□□□□□ -1.84
PPP4R1-216ENST00000580283 MED28Q9H204 178 aa3.57□□□□□ -1.84
PPP4R1-216ENST00000580283 NIT2Q9NQR4 276 aa3.57□□□□□ -1.84
PPP4R1-216ENST00000580283 NUDT15Q9NV35 164 aa3.57□□□□□ -1.84
PPP4R1-216ENST00000580283 FAM74A7A6NL05 159 aa3.56□□□□□ -1.84
PPP4R1-216ENST00000580283 CENPXA8MT69 81 aa3.56□□□□□ -1.84
PPP4R1-216ENST00000580283 ZNF861PO60384 105 aa3.56□□□□□ -1.84
PPP4R1-216ENST00000580283 CXorf1O96002 111 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms