RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 FAM236AA0A1B0GUQ0 79 aa10.04□□□□□ -0.8
NDEL1-204ENST00000578172 FAM236BA0A1B0GV22 79 aa10.04□□□□□ -0.8
NDEL1-204ENST00000578172 IGHV3-30-3P0DP02 117 aa10.04□□□□□ -0.8
NDEL1-204ENST00000578172 ZNF22P17026 224 aaPredicted RBP10.04□□□□□ -0.8
NDEL1-204ENST00000578172 LINC01619G3V211 115 aa10.03□□□□□ -0.8
NDEL1-204ENST00000578172 H3BUA1 57 aa10.03□□□□□ -0.8
NDEL1-204ENST00000578172 RHODO00212 210 aa10.03□□□□□ -0.8
NDEL1-204ENST00000578172 NDUFV3P56181 108 aaKnown RBP10.03□□□□□ -0.8
NDEL1-204ENST00000578172 LINC00467Q9BRT7 94 aa10.03□□□□□ -0.8
NDEL1-204ENST00000578172 ATRQ13535 2644 aa10.03□□□□□ -0.8
NDEL1-204ENST00000578172 ZNF415Q09FC8 603 aa10.03□□□□□ -0.8
NDEL1-204ENST00000578172 CLPSL2Q6UWE3 100 aa10.03□□□□□ -0.8
NDEL1-204ENST00000578172 NOP10Q9NPE3 64 aaKnown RBP10.03□□□□□ -0.8
NDEL1-204ENST00000578172 DEFB130BP0DP73 79 aa10.02□□□□□ -0.8
NDEL1-204ENST00000578172 DEFB130AP0DP74 79 aa10.02□□□□□ -0.8
NDEL1-204ENST00000578172 BBC3Q96PG8 261 aaPredicted RBP10.02□□□□□ -0.8
NDEL1-204ENST00000578172 ESM1Q9NQ30 184 aa10.02□□□□□ -0.81
NDEL1-204ENST00000578172 PRIMA1Q86XR5 153 aa10.02□□□□□ -0.81
NDEL1-204ENST00000578172 YAE1D1Q9NRH1 226 aa10.02□□□□□ -0.81
NDEL1-204ENST00000578172 K7EMT4 169 aa10.01□□□□□ -0.81
NDEL1-204ENST00000578172 PEMTQ9UBM1 199 aa10.01□□□□□ -0.81
NDEL1-204ENST00000578172 UBE2L6O14933 153 aa10.01□□□□□ -0.81
NDEL1-204ENST00000578172 WFDC11Q8NEX6 87 aa10.01□□□□□ -0.81
NDEL1-204ENST00000578172 CDKN2A-AS1Q9UH64 79 aa10.01□□□□□ -0.81
NDEL1-204ENST00000578172 RBMY1BA6NDE4 496 aaKnown RBP10□□□□□ -0.81
NDEL1-204ENST00000578172 RBMY1EA6NEQ0 496 aaKnown RBP10□□□□□ -0.81
NDEL1-204ENST00000578172 RBMY1DP0C7P1 496 aaKnown RBP10□□□□□ -0.81
NDEL1-204ENST00000578172 TIMM17AQ99595 171 aa10□□□□□ -0.81
NDEL1-204ENST00000578172 ZNF702PQ9H963 129 aa10□□□□□ -0.81
NDEL1-204ENST00000578172 SETXQ7Z333 2677 aaKnown RBP10□□□□□ -0.81
NDEL1-204ENST00000578172 TRBV27A0A0K0K1C4 114 aa10□□□□□ -0.81
NDEL1-204ENST00000578172 Q6ZTI0 123 aa10□□□□□ -0.81
NDEL1-204ENST00000578172 UBR5O95071 2799 aaPredicted RBP10□□□□□ -0.81
NDEL1-204ENST00000578172 IGHV3-30P01768 117 aa10□□□□□ -0.81
NDEL1-204ENST00000578172 IGHV3-30-5P0DP03 117 aa10□□□□□ -0.81
NDEL1-204ENST00000578172 ELANEP08246 267 aa9.99□□□□□ -0.81
NDEL1-204ENST00000578172 MAP6D1Q9H9H5 199 aa9.99□□□□□ -0.81
NDEL1-204ENST00000578172 LGALS9O00182 355 aa9.99□□□□□ -0.81
NDEL1-204ENST00000578172 INSP01308 110 aa9.99□□□□□ -0.81
NDEL1-204ENST00000578172 A0A0J9YXY3 114 aa9.99□□□□□ -0.81
NDEL1-204ENST00000578172 LINC00158P58513 81 aa9.99□□□□□ -0.81
NDEL1-204ENST00000578172 SLC25A29Q8N8R3 303 aa9.99□□□□□ -0.81
NDEL1-204ENST00000578172 C9orf85Q96MD7 179 aa9.99□□□□□ -0.81
NDEL1-204ENST00000578172 Q9H8V8 135 aa9.99□□□□□ -0.81
NDEL1-204ENST00000578172 IGHV4-31P0DP07 118 aa9.98□□□□□ -0.81
NDEL1-204ENST00000578172 SMCPP49901 116 aaPredicted RBP9.98□□□□□ -0.81
NDEL1-204ENST00000578172 LOC100131303A0A0U1RQF7 123 aa9.97□□□□□ -0.81
NDEL1-204ENST00000578172 LEPROTO15243 131 aa9.97□□□□□ -0.81
NDEL1-204ENST00000578172 DEFB4AO15263 64 aa9.97□□□□□ -0.81
NDEL1-204ENST00000578172 TRGV4A0A0C4DH28 118 aa9.97□□□□□ -0.81
NDEL1-204ENST00000578172 ADAMTSL4-AS1Q5T5F5 129 aa9.97□□□□□ -0.81
NDEL1-204ENST00000578172 TINCRA0A1B0GVN0 87 aa9.97□□□□□ -0.81
NDEL1-204ENST00000578172 TMEM223A0PJW6 202 aa9.97□□□□□ -0.81
NDEL1-204ENST00000578172 MED14OSP0DP75 135 aa9.97□□□□□ -0.81
NDEL1-204ENST00000578172 HTN3P15516 51 aa9.97□□□□□ -0.81
NDEL1-204ENST00000578172 CITED2Q99967 270 aaPredicted RBP9.97□□□□□ -0.81
NDEL1-204ENST00000578172 PFN2P35080 140 aa9.96□□□□□ -0.81
NDEL1-204ENST00000578172 LINC01546A6NGU7 62 aa9.96□□□□□ -0.82
NDEL1-204ENST00000578172 FAM19A4Q96LR4 140 aa9.96□□□□□ -0.82
NDEL1-204ENST00000578172 PAX4O43316 350 aa9.96□□□□□ -0.82
NDEL1-204ENST00000578172 RHOHQ15669 191 aa9.96□□□□□ -0.82
NDEL1-204ENST00000578172 ATP6V0E2Q8NHE4 81 aa9.96□□□□□ -0.82
NDEL1-204ENST00000578172 CDIP1Q9H305 208 aa9.96□□□□□ -0.82
NDEL1-204ENST00000578172 ICOSQ9Y6W8 199 aa9.96□□□□□ -0.82
NDEL1-204ENST00000578172 APCP25054 2843 aa9.96□□□□□ -0.82
NDEL1-204ENST00000578172 CRLF1O75462 422 aa9.95□□□□□ -0.82
NDEL1-204ENST00000578172 IGKV3D-7A0A0C4DH55 119 aa9.95□□□□□ -0.82
NDEL1-204ENST00000578172 DSCR9P59020 149 aa9.94□□□□□ -0.82
NDEL1-204ENST00000578172 LINC00694P0DN24 101 aa9.94□□□□□ -0.82
NDEL1-204ENST00000578172 UBE2D1P51668 147 aa9.94□□□□□ -0.82
NDEL1-204ENST00000578172 RPL36AP83881 106 aaKnown RBP9.94□□□□□ -0.82
NDEL1-204ENST00000578172 RPL36ALQ969Q0 106 aaKnown RBP9.94□□□□□ -0.82
NDEL1-204ENST00000578172 CCL24O00175 119 aa9.94□□□□□ -0.82
NDEL1-204ENST00000578172 Q6YL49 198 aa9.94□□□□□ -0.82
NDEL1-204ENST00000578172 TEP1Q99973 2627 aaKnown RBP9.94□□□□□ -0.82
NDEL1-204ENST00000578172 EIF4EBP3O60516 100 aaPredicted RBP9.93□□□□□ -0.82
NDEL1-204ENST00000578172 IGHV3-33P01772 117 aa9.93□□□□□ -0.82
NDEL1-204ENST00000578172 C5orf38Q86SI9 138 aa9.93□□□□□ -0.82
NDEL1-204ENST00000578172 POM121L12Q8N7R1 296 aa9.93□□□□□ -0.82
NDEL1-204ENST00000578172 TRIAP1O43715 76 aa9.93□□□□□ -0.82
NDEL1-204ENST00000578172 RPL32P62910 135 aaKnown RBP9.93□□□□□ -0.82
NDEL1-204ENST00000578172 DEFB113Q30KQ7 82 aa9.93□□□□□ -0.82
NDEL1-204ENST00000578172 CRPP02741 224 aa9.92□□□□□ -0.82
NDEL1-204ENST00000578172 COX6A2Q02221 97 aa9.92□□□□□ -0.82
NDEL1-204ENST00000578172 TRBV10-2A0A0K0K1G8 114 aa9.92□□□□□ -0.82
NDEL1-204ENST00000578172 DEFB114Q30KQ6 69 aa9.92□□□□□ -0.82
NDEL1-204ENST00000578172 PIK3CD-AS1Q5SR53 167 aa9.92□□□□□ -0.82
NDEL1-204ENST00000578172 SHISA2Q6UWI4 295 aa9.92□□□□□ -0.82
NDEL1-204ENST00000578172 BAALC-AS2P0C853 105 aa9.91□□□□□ -0.82
NDEL1-204ENST00000578172 Q9HAA7 133 aa9.91□□□□□ -0.82
NDEL1-204ENST00000578172 PRO0461Q9UI25 63 aa9.91□□□□□ -0.82
NDEL1-204ENST00000578172 SMR3AQ99954 134 aa9.9□□□□□ -0.82
NDEL1-204ENST00000578172 NBPF19A0A087WUL8 3843 aa9.9□□□□□ -0.82
NDEL1-204ENST00000578172 IGHV1-58A0A0C4DH39 117 aa9.9□□□□□ -0.82
NDEL1-204ENST00000578172 NXPH4O95158 308 aa9.9□□□□□ -0.82
NDEL1-204ENST00000578172 TRBV6-5A0A0K0K1A5 114 aa9.89□□□□□ -0.83
NDEL1-204ENST00000578172 ODF3L2Q3SX64 289 aa9.89□□□□□ -0.83
NDEL1-204ENST00000578172 DNAJC9-AS1A6NH13 148 aa9.89□□□□□ -0.83
NDEL1-204ENST00000578172 PF4P02776 101 aa9.89□□□□□ -0.83
NDEL1-204ENST00000578172 FHL3Q13643 280 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms